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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 5
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU6Hr1G043820.1 Barley cytosol, endoplasmic reticulum, plasma membrane 15.49 39.29
HORVU3Hr1G030470.1 Barley cytosol, extracellular, plasma membrane 15.26 38.69
KRG88422 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 44.13 38.29
CDY23798 Canola nucleus, peroxisome, plasma membrane 34.04 37.76
HORVU4Hr1G039510.1 Barley cytosol 14.79 37.5
TraesCS7A01G367700.1 Wheat plasma membrane 41.08 30.81
CDY39546 Canola plasma membrane 64.79 29.52
CDX77421 Canola plasma membrane 64.55 29.41
Solyc06g070920.2.1 Tomato extracellular, plasma membrane 43.66 29.15
CDY23043 Canola cytosol, mitochondrion 34.51 28.71
CDY02120 Canola cytosol, nucleus, plasma membrane 43.66 28.22
CDY31786 Canola cytosol, nucleus, plasma membrane 43.43 28.03
KRH54520 Soybean plasma membrane, plastid 52.82 27.88
CDY36932 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 56.57 27.2
CDY36930 Canola plasma membrane 60.09 27.18
CDY24156 Canola plasma membrane 59.86 27.07
CDY24158 Canola plasma membrane 57.04 26.24
AT3G47770.2 Thale cress endoplasmic reticulum, golgi, plasma membrane, plastid 57.04 26.24
CDX83025 Canola plasma membrane 57.51 26.01
CDY24157 Canola plastid 57.28 25.66
CDX68441 Canola plasma membrane 56.1 25.37
CDY36931 Canola plastid 55.4 25.35
CDX77874 Canola plasma membrane 47.89 24.61
Bra033786.1-P Field mustard cytosol, mitochondrion, nucleus 16.9 24.16
CDY21797 Canola plasma membrane 49.53 23.34
CDY02114 Canola plasma membrane 48.36 23.22
CDY23039 Canola plasma membrane 47.89 22.97
Solyc03g113040.2.1 Tomato plastid 49.53 22.33
Solyc03g113060.2.1 Tomato extracellular 49.3 22.25
KRH56933 Soybean plasma membrane, plastid 49.3 22.13
KRH03450 Soybean plasma membrane, plastid 49.53 22.12
CDY62599 Canola plasma membrane 43.9 21.52
TraesCS1A01G343000.1 Wheat plasma membrane 47.18 21.09
TraesCS1D01G345200.1 Wheat plasma membrane 46.95 21.01
Os08t0398300-01 Rice plasma membrane 47.18 21.0
KXG25097 Sorghum plasma membrane 47.18 20.98
TraesCS1B01G356200.1 Wheat plasma membrane 46.48 20.8
TraesCS5D01G195700.1 Wheat plasma membrane 46.01 20.72
HORVU4Hr1G087670.8 Barley mitochondrion 46.48 20.62
TraesCS5A01G193200.1 Wheat plasma membrane 45.77 20.61
HORVU1Hr1G075620.5 Barley plasma membrane 46.01 20.55
TraesCS5B01G188600.1 Wheat plasma membrane 45.77 20.53
Solyc06g070950.1.1 Tomato plasma membrane 42.72 20.43
TraesCS4B01G365000.1 Wheat plasma membrane 46.48 20.12
Zm00001d050259_P002 Maize plasma membrane 46.24 20.02
HORVU5Hr1G056930.20 Barley plasma membrane 45.77 19.96
TraesCSU01G138200.1 Wheat plasma membrane 46.71 19.94
OQU89360 Sorghum plasma membrane 44.13 19.83
Zm00001d020208_P003 Maize plasma membrane 44.13 19.83
TraesCS5A01G534100.3 Wheat cytosol 46.95 19.8
TraesCS3D01G368700.2 Wheat plasma membrane 44.84 19.73
EER89983 Sorghum plastid 42.72 19.08
TraesCS7D01G355100.1 Wheat plastid 42.49 18.95
Zm00001d036927_P001 Maize plasma membrane, plastid 42.49 18.76
TraesCS7B01G260800.1 Wheat plastid 42.02 18.72
GSMUA_Achr7P23890_001 Banana plasma membrane 50.94 18.55
GSMUA_Achr3P20510_001 Banana plasma membrane 50.23 18.24
Os06t0589300-01 Rice plasma membrane 40.61 18.23
HORVU7Hr1G085680.2 Barley endoplasmic reticulum, peroxisome, plastid 42.25 18.16
CDY39288 Canola cytosol 6.57 14.14
CDX96058 Canola cytosol 7.98 12.88
CDY01873 Canola cytosol 7.98 12.88
CDY16404 Canola plastid 9.39 12.16
CDY57805 Canola plastid 9.39 12.16
CDY64180 Canola plasma membrane 17.84 12.12
CDY58413 Canola cytosol, plastid 7.51 11.68
CDX69605 Canola plastid 7.51 11.68
CDY02116 Canola plasma membrane 22.54 11.43
KRH63384 Soybean plasma membrane 19.48 11.4
CDY24573 Canola plasma membrane 3.99 10.69
CDX68434 Canola plasma membrane 17.61 10.56
CDY23042 Canola plasma membrane 22.77 10.35
CDY23040 Canola plasma membrane 23.0 10.27
CDY23800 Canola plasma membrane 21.83 10.16
CDY52820 Canola cytosol, nucleus, plasma membrane 20.89 10.14
CDY24159 Canola golgi, mitochondrion 21.6 9.82
CDY02118 Canola plasma membrane 22.77 9.75
CDY36933 Canola golgi, mitochondrion 21.6 9.53
CDX68439 Canola nucleus 3.52 9.49
CDY62594 Canola cytosol 10.09 9.41
CDX68436 Canola plasma membrane 6.34 9.18
CDY02115 Canola extracellular, mitochondrion, plasma membrane, plastid 6.34 7.4
CDY62596 Canola cytosol, plasma membrane, vacuole 5.16 7.17
CDX94927 Canola cytosol 1.88 6.72
CDX68440 Canola cytosol, mitochondrion 2.11 6.47
CDY22536 Canola mitochondrion, plasma membrane 16.2 3.72
CDY35403 Canola mitochondrion, plasma membrane 16.2 3.71
CDY02119 Canola endoplasmic reticulum, plasma membrane, plastid 1.41 3.35
CDY23799 Canola cytosol, peroxisome, plasma membrane 1.41 2.94
Solyc06g070930.2.1 Tomato plastid 0.7 1.09
CDX68435 Canola mitochondrion, plastid 0.47 0.77
Protein Annotations
MapMan:24.1.3.2.1Gene3D:3.40.50.300GO:A0A078BZY5InterPro:ABCAInterPro:ABC_transporter-likeEnsemblPlants:CDX68438
ProteinID:CDX68438ProteinID:CDX68438.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00125865001
InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005PANTHER:PTHR19229PANTHER:PTHR19229:SF141SUPFAM:SSF52540
TMHMM:TMhelixUniParc:UPI0004EDC746SEG:seg:::
Description
BnaC01g25160D
Coordinates
chrLK031788:+:1462684..1469228
Molecular Weight (calculated)
47727.3 Da
IEP (calculated)
6.348
GRAVY (calculated)
0.383
Length
426 amino acids
Sequence
(BLAST)
001: MISYAYCLDI STVCVICLMI FGSAIGLKFF LLNDSSINDY SLHFVFYFLY INLQISVAFL ASSAFSKVET ASVVGYIYVF GSGLLGWFLF QFLIEDLSYP
101: RHWIFVMELY PGFSLFRGLY EFSHYAFQGN LTGRNGMMWK DLSESSMDKV FYIIIVEWFF LLISAYYIDK MSSSGKGLLF FLKKPFEKFL SPQRPCLQNQ
201: VSTVAVEMEK LDVIQESEKV EKLMLEQSIS HTIVCNKMNK EYPGRDGNPP KMAVRGLSFA VPSGECFGML GPNGAGKTSF INMMTGLVKP TSGSAFVQGL
301: DICMDMDRVY TSMGVCPQHD LLWETLVLFV SLTQVPAAAA AAESAAAAAS IPLVVVRFAA ADSAAAAASD ATCCSFLRRR TLPQPQPQTQ KIDLVMFVWL
401: PQTQFSFISY FNFMNFVNLY NCILNK
Best Arabidopsis Sequence Match ( AT3G47740.1 )
(BLAST)
001: MADSGPASFW TRANAILRKN LTYQKRNIWS NVRLIMIPFY LCIVLVFIQA LFDSQVNNSL DNQCGCQCID KLGDGKCQMT CGLEYSTRDQ GFFCAIPKPQ
101: PWPPLILIPR PEYRALDANF TNDSCRRKNS CPVTILFTGN NHSLGAVLSR NLLRRPFAMN SSDLLFSLAN NVLATTFKGS ATNYLDAGIV SDGSIYNIQP
201: RCPPNSNFSI SIGQSPLNFT KDMRCVQGLN LWRNNSIEVN LELFEGYHKG NSDGMINEIV AAYDLFDTNM TNFNVNIWFN ATYKDEARNQ PYKVVRVPRL
301: VNWVSNAYLQ YLQGPRTKML FEFVKEMPKP ETKLRLDIAS LIGPIFFTWV ILLLLPVILN SLVYEKQQRL RIIMKMHGLG DGPYWIISYA YFLALSTFYI
401: IFLMIFGSVI GLKFFLLNDF SLQFSFYFVY INLQISIAFL LSSAFSKVET ASVAAYLYVF GSGLLGMFLF QFLLEGLSFP RRWIFVMELY PGFSLYRGLY
501: EFSQNAYQGN LNGKDGMKWK YFSDNAIDEV FYIIIVEWFV ALIATYYIDK MSSSGKDLLF FLKNQNPFKI SHSLQKQVSA ISVEMEKLDV IHESEKVAQL
601: MLESSTSHAI VCDKLRKVYP GRDGNPPKKA VRVLSLAVPS GECFGMLGPN GAGKTSFINM MTGLVKPTSG AAFVQGLDIC KDMDRVYTSM GVCPQHDLLW
701: ETLTGREHLL FYGRLKNLKG VDLNQAVEES LRSVNLFHGG VADKPAGKYS GGMKRRLSVA ISLIGNPKVV YMDEPSTGLD PASRKNLWTV IKNAKRHTAI
801: ILTTHSMEEA EFLCDRLGIF VDGRLQCIGN PKELKGRYGG SYVLTMTTSS EHEKDVEMLV QEVSPNVKKI YHIAGTQKFE IPKDEVRISE VFQVVEKAKS
901: NFKVFAWGLA DTTLEDVFIK VARTAQAFNV FS
Arabidopsis Description
ABCA3ABC transporter A family member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEH6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.