Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
TargetP:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX94927 Canola cytosol 19.14 82.35
CDY02120 Canola cytosol, nucleus, plasma membrane 79.49 61.76
CDY31786 Canola cytosol, nucleus, plasma membrane 78.71 61.06
CDX68440 Canola cytosol, mitochondrion 15.82 58.27
CDY62599 Canola plasma membrane 80.27 47.3
TraesCS7A01G367700.1 Wheat plasma membrane 51.95 46.83
Solyc06g070920.2.1 Tomato extracellular, plasma membrane 55.86 44.83
AT5G61700.1 Thale cress plasma membrane 78.12 43.62
CDY23798 Canola nucleus, peroxisome, plasma membrane 32.23 42.97
CDX68439 Canola nucleus 13.09 42.41
KRH54520 Soybean plasma membrane, plastid 62.7 39.78
CDY02114 Canola plasma membrane 67.97 39.23
CDY23039 Canola plasma membrane 67.77 39.08
CDY36932 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 65.43 37.81
HORVU6Hr1G043820.1 Barley cytosol, endoplasmic reticulum, plasma membrane 12.3 37.5
CDY36930 Canola plasma membrane 67.97 36.94
CDX83025 Canola plasma membrane 67.19 36.52
CDY24156 Canola plasma membrane 67.19 36.52
CDY24158 Canola plasma membrane 65.82 36.39
HORVU4Hr1G039510.1 Barley cytosol 11.91 36.31
CDX68441 Canola plasma membrane 66.41 36.09
HORVU3Hr1G030470.1 Barley cytosol, extracellular, plasma membrane 11.72 35.71
CDX77421 Canola plasma membrane 63.09 34.55
CDX68438 Canola endoplasmic reticulum, extracellular, plasma membrane 28.71 34.51
CDY39546 Canola plasma membrane 62.89 34.44
CDY36931 Canola plastid 61.91 34.05
Solyc03g113040.2.1 Tomato plastid 62.11 33.65
CDY24157 Canola plastid 62.5 33.65
Solyc03g113060.2.1 Tomato extracellular 60.94 33.05
CDY21797 Canola plasma membrane 57.81 32.74
KRH56933 Soybean plasma membrane, plastid 58.98 31.82
KRH03450 Soybean plasma membrane, plastid 58.59 31.45
Solyc06g070950.1.1 Tomato plasma membrane 54.49 31.31
TraesCS1B01G356200.1 Wheat plasma membrane 57.81 31.09
TraesCS1D01G345200.1 Wheat plasma membrane 57.62 30.99
TraesCS1A01G343000.1 Wheat plasma membrane 57.62 30.95
HORVU1Hr1G075620.5 Barley plasma membrane 57.42 30.82
KXG25097 Sorghum plasma membrane 57.03 30.48
Os08t0398300-01 Rice plasma membrane 56.64 30.3
HORVU4Hr1G087670.8 Barley mitochondrion 56.05 29.9
TraesCS5D01G195700.1 Wheat plasma membrane 55.08 29.81
TraesCS5A01G193200.1 Wheat plasma membrane 54.88 29.7
Zm00001d050259_P002 Maize plasma membrane 56.84 29.57
TraesCS5B01G188600.1 Wheat plasma membrane 54.69 29.47
OQU89360 Sorghum plasma membrane 54.3 29.32
Zm00001d020208_P003 Maize plasma membrane 53.71 29.01
TraesCS4B01G365000.1 Wheat plasma membrane 55.66 28.96
HORVU5Hr1G056930.20 Barley plasma membrane 54.69 28.66
TraesCSU01G138200.1 Wheat plasma membrane 55.86 28.66
CDX77874 Canola plasma membrane 46.29 28.59
TraesCS5A01G534100.3 Wheat cytosol 55.66 28.22
TraesCS3D01G368700.2 Wheat plasma membrane 52.93 28.0
Os06t0589300-01 Rice plasma membrane 51.17 27.61
TraesCS7B01G260800.1 Wheat plastid 51.17 27.41
TraesCS7D01G355100.1 Wheat plastid 50.98 27.33
EER89983 Sorghum plastid 50.59 27.15
KRH63384 Soybean plasma membrane 38.48 27.06
Zm00001d036927_P001 Maize plasma membrane, plastid 50.78 26.94
HORVU7Hr1G085680.2 Barley endoplasmic reticulum, peroxisome, plastid 50.98 26.34
GSMUA_Achr7P23890_001 Banana plasma membrane 60.16 26.32
KRG88422 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 24.61 25.66
GSMUA_Achr3P20510_001 Banana plasma membrane 58.2 25.4
CDY62594 Canola cytosol 22.46 25.16
CDY16404 Canola plastid 15.04 23.4
CDY01873 Canola cytosol 11.91 23.11
CDX96058 Canola cytosol 11.91 23.11
CDY57805 Canola plastid 14.84 23.1
CDY58413 Canola cytosol, plastid 11.91 22.26
CDX69605 Canola plastid 11.91 22.26
CDY64180 Canola plasma membrane 25.39 20.73
CDX68434 Canola plasma membrane 26.95 19.44
CDY02116 Canola plasma membrane 29.3 17.86
CDY24159 Canola golgi, mitochondrion 29.88 16.33
CDY23800 Canola plasma membrane 28.52 15.96
CDY36933 Canola golgi, mitochondrion 29.88 15.85
CDY52820 Canola cytosol, nucleus, plasma membrane 27.15 15.83
CDY23040 Canola plasma membrane 29.49 15.83
CDY39288 Canola cytosol 6.05 15.66
CDY23042 Canola plasma membrane 28.32 15.47
CDY02118 Canola plasma membrane 28.32 14.57
CDX68436 Canola plasma membrane 8.01 13.95
CDY22536 Canola mitochondrion, plasma membrane 27.73 7.66
CDY35403 Canola mitochondrion, plasma membrane 27.54 7.58
CDY02119 Canola endoplasmic reticulum, plasma membrane, plastid 1.17 3.35
CDY23799 Canola cytosol, peroxisome, plasma membrane 1.17 2.94
CDY02115 Canola extracellular, mitochondrion, plasma membrane, plastid 0.78 1.1
Solyc06g070930.2.1 Tomato plastid 0.59 1.09
CDX68435 Canola mitochondrion, plastid 0.39 0.77
CDY24573 Canola plasma membrane 0.2 0.63
CDY62596 Canola cytosol, plasma membrane, vacuole 0.0 0.0
Protein Annotations
MapMan:24.1.3.2.1Gene3D:3.40.50.300GO:A0A078GEL2UniProt:A0A078GEL2InterPro:AAA+_ATPaseInterPro:ABCA
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDY23043ProteinID:CDY23043ProteinID:CDY23043.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887
GO:GO:0042626GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00021507001InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005
ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19229PANTHER:PTHR19229:SF141SMART:SM00382SUPFAM:SSF52540
TMHMM:TMhelixUniParc:UPI0004EE39E1SEG:seg:::
Description
BnaC07g31440DBnaC07g31440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GEL2]
Coordinates
chrLK032139:+:263384..265490
Molecular Weight (calculated)
48652.6 Da
IEP (calculated)
8.609
GRAVY (calculated)
-0.157
Length
512 amino acids
Sequence
(BLAST)
001: MQRKHXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXYRGL YEFSQYASRG NGMKWQDLSD
101: SGMGEVLCIM SIEWFLALII AFYIDQVFSS GKHPFFFLNP FKKSSSIPSK PTVQSVDSKK VSIDLGKIDV SQEREMVQQL RNEGSAGHAI LCDNLKKVYP
201: GRDGNPPKMA VRGLYLDVPS GECFGMLGPN GAGKTSFISM MTGLLKPSSG TALVQGLDIC KDMNKVYTSM GVCPQHDLLW EILTGREHLL FYGRLKNIKG
301: SALTQAVEES LKSVSLFDGG VGDKPAGNYS GGMKRRLSVA ISLIGNPKVV YLDEPSTGLD PASRKNLWDV IQRAKQNTAI ILTTHSMEEA EFLCDRLGIF
401: VDGALQCIGN SKELKSRYGG SYVFTMTTSS EHEEDVERLV STVSHNAKKV YHLAGTQKFE LPKNEVRIAE VFRAVEKAKS NFTVFAWGLA DTTLEDVFIK
501: VAKSAQAFIS LS
Best Arabidopsis Sequence Match ( AT3G47780.1 )
(BLAST)
001: MADPGPASFS TRANALLRKN LTYQKRNLWS NIRLIMIPFY LCILLVIIQI LFDTQVNNSA DNRCGCECIE RNRAGKCQRE LCGLEHSKPD QAFFCSIPRP
101: PLWPPLLQIP RPESRDVRGL RDDSCRRTGS CPVTILFTGN NRSLGTTVSE NLFTSSVSAN ASEILRTLAN NVLGTTVEAD FTNYLDPGIA SNLSIYNIQP
201: RCILNATFPF SFEQPPLKFE KELRCVQGSN LWTNTSKEVN DKIFKGYKKG NPEGKINEIA AAYDLLNTDR NNFNVHIWYN STYKDDAGNR LIKLIRVPRS
301: VNLVSNAYLQ FLQGPGTRML FEYVKEMPKP ETSLRLDIAS LIGPLFFTWV ILLLFPVILS SLVYEKQQHL RIIMKMHGLG DGPYWMISYA YFLTISVLYV
401: ICLMIFGSAI GLKFFRLNSY SIQFVFYFLY LNLQIALAFL VSSVFSKVKT STVASYIYVF GSGLLGLFLL NFLIEDSSFP RGWIIVMELY PGFSLYRGLY
501: ELAQFAFRGN LRGEDGMKWK DFGDSAMDDV FYIIVVEWFL ALIAAYYIDK ISSSGRNPLF FLQNPFKKSP SLRRPSLQRQ GSKVSVDMEK PDVTHESKKV
601: ERLMLESSTS HAIVCDNLKK VYPGRDGNPP KLAVRGLSLA VPSGECFGML GPNGAGKTSF INMMTGLLKP TSGTALVQGL DICNDMDRVY TSMGVCPQHD
701: LLWETLTGRE HLLFYGRLKN LKGADLNQAV EESLKSVNLF HGGVADKPAG KYSGGMKRRL SVAISLIGNP KVVYMDEPST GLDPASRKNL WTVIKRAKQN
801: TAIILTTHSM EEAEFLCDRL GIFVDGGLQC IGNPKELKGR YGGSYVFTMT TSSEHEQNVE KLIKDVSPNA KKIYHIAGTQ KFELPKEEVR ISEVFQAVEK
901: AKSNFTVFAW GLADTTLEDV FIKVVRNGQA FNVFS
Arabidopsis Description
ABCA7ABC transporter A family member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.