Factsheet for AT5G61700.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
endoplasmic reticulum 1
plasma membrane 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02120	Canola	cytosol, nucleus, plasma membrane	64.34	89.53
CDY31786	Canola	cytosol, nucleus, plasma membrane	63.69	88.48
CDY62599	Canola	plasma membrane	82.77	87.34
CDY23043	Canola	cytosol, mitochondrion	43.62	78.12
AT5G61740.1	Thale cress	plasma membrane	76.77	77.45
AT3G47780.1	Thale cress	plasma membrane	70.67	69.3
KRH54520	Soybean	plasma membrane, plastid	58.12	66.05
AT3G47750.1	Thale cress	mitochondrion, plasma membrane	67.18	65.74
AT3G47760.3	Thale cress	plasma membrane	66.96	65.6
AT3G47770.2	Thale cress	endoplasmic reticulum, golgi, plasma membrane, plastid	65.98	65.33
AT3G47740.1	Thale cress	plasma membrane	66.19	65.13
Solyc03g113040.2.1	Tomato	plastid	64.56	62.65
AT3G47790.1	Thale cress	plasma membrane	60.85	61.93
Solyc06g070920.2.1	Tomato	extracellular, plasma membrane	42.86	61.6
KRH63384	Soybean	plasma membrane	48.85	61.54
KRG88422	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	32.61	60.9
Solyc03g113060.2.1	Tomato	extracellular	62.38	60.59
KRH56933	Soybean	plasma membrane, plastid	61.72	59.64
KRH03450	Soybean	plasma membrane, plastid	61.18	58.8
TraesCS7A01G367700.1	Wheat	plasma membrane	35.99	58.1
VIT_07s0095g00600.t01	Wine grape	extracellular	4.14	55.07
KXG25097	Sorghum	plasma membrane	57.36	54.91
Zm00001d050259_P002	Maize	plasma membrane	57.91	53.96
Os08t0398300-01	Rice	plasma membrane	56.27	53.92
TraesCS1B01G356200.1	Wheat	plasma membrane	55.94	53.89
HORVU4Hr1G087670.8	Barley	mitochondrion	56.38	53.85
TraesCS1A01G343000.1	Wheat	plasma membrane	55.94	53.83
TraesCS1D01G345200.1	Wheat	plasma membrane	55.83	53.78
HORVU1Hr1G075620.5	Barley	plasma membrane	55.83	53.67
Solyc06g070950.1.1	Tomato	plasma membrane	52.13	53.65
OQU89360	Sorghum	plasma membrane	54.42	52.64
Zm00001d020208_P003	Maize	plasma membrane	54.09	52.32
TraesCS5D01G195700.1	Wheat	plasma membrane	53.54	51.9
TraesCS4B01G365000.1	Wheat	plasma membrane	55.51	51.73
TraesCS5A01G193200.1	Wheat	plasma membrane	53.33	51.69
TraesCSU01G138200.1	Wheat	plasma membrane	55.4	50.9
TraesCS3D01G368700.2	Wheat	plasma membrane	53.44	50.62
TraesCS5A01G534100.3	Wheat	cytosol	55.62	50.49
TraesCS5B01G188600.1	Wheat	plasma membrane	52.13	50.32
Os06t0589300-01	Rice	plasma membrane	51.8	50.05
HORVU5Hr1G056930.20	Barley	plasma membrane	53.22	49.95
EER89983	Sorghum	plastid	51.58	49.58
TraesCS7D01G355100.1	Wheat	plastid	51.47	49.42
TraesCS7B01G260800.1	Wheat	plastid	51.47	49.37
Zm00001d036927_P001	Maize	plasma membrane, plastid	51.25	48.7
HORVU7Hr1G085680.2	Barley	endoplasmic reticulum, peroxisome, plastid	51.04	47.23
GSMUA_Achr7P23890_001	Banana	plasma membrane	60.09	47.09
GSMUA_Achr3P20510_001	Banana	plasma membrane	59.0	46.12
HORVU6Hr1G043820.1	Barley	cytosol, endoplasmic reticulum, plasma membrane	6.87	37.5
HORVU3Hr1G030470.1	Barley	cytosol, extracellular, plasma membrane	6.65	36.31
HORVU4Hr1G039510.1	Barley	cytosol	6.54	35.71
Solyc06g070930.2.1	Tomato	plastid	9.92	33.21
AT5G14100.1	Thale cress	plastid	7.52	24.82
AT5G61730.2	Thale cress	plasma membrane, plastid	24.86	24.0
AT3G47730.1	Thale cress	mitochondrion, plasma membrane	25.52	23.8
AT5G61690.2	Thale cress	plasma membrane	24.43	23.5
AT1G67940.1	Thale cress	cytosol	6.43	22.43
AT1G65410.1	Thale cress	plastid	8.4	22.32
AT2G41700.1	Thale cress	mitochondrion, plasma membrane	21.7	10.57

Protein Annotations

MapMan:24.1.3.2.1	Gene3D:3.40.50.300	EntrezGene:836292	InterPro:AAA+_ATPase	InterPro:ABCA	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	ProteinID:AED97507.2	ArrayExpress:AT5G61700	EnsemblPlantsGene:AT5G61700	RefSeq:AT5G61700	TAIR:AT5G61700
RefSeq:AT5G61700-TAIR-G	EnsemblPlants:AT5G61700.1	TAIR:AT5G61700.1	Symbol:ATATH16	ProteinID:BAB10070.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0043231	GO:GO:0055085
InterPro:IPR003439	RefSeq:NP_001318859.1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF12698	PO:PO:0000084
PO:PO:0001016	PO:PO:0001017	PO:PO:0007064	PO:PO:0007115	PO:PO:0007611	PO:PO:0007616
PO:PO:0009005	PO:PO:0009025	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19229
PANTHER:PTHR19229:SF141	UniProt:Q9FLT8	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000009F057
SEG:seg	:	:	:	:	:

Description

ABCA12ABC transporter A family member 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLT8]

Coordinates

chr5:+:24793864..24797944

Molecular Weight (calculated)

102241.0 Da

IEP (calculated)

8.503

GRAVY (calculated)

0.011

Length

917 amino acids

Sequence
(BLAST)

001: MVNPSPASFW TQANALLRKN LTYQRKHIWT NVRLILVPLF LCLILLAIQQ VLDALMKGVS DMSNCGGNVT LPGGICPIPN PPSLPPMLQI PQHELRSVKT
101: DFFSYKDLPD KLCRETGSCP VTILFTGDKL PLGKALSANI FSTSFVVNSS DLLPTLANNV LGSTEAAGED NYEDPGIASD LPIYSIQPSC SANSTWPLSL
201: GQIQTAVKCV QGLCLWRNNS VEVNDELFKG SWRGNPAGMP NEIVAAYDLM STDRKNFNVT IWYNSTYNDE FATGQALKLV RVPRSINLIS NAYLKFLKGP
301: GTRILFEFLK EVPKEETKMN QDIASLLGPL FFTWVVLLLF PVILTSLVYE KQERLRIIMK MHGLGDGPYW MISYAYFLTI SMLYVISLVG FGSAIGLKYF
401: RRNDYSIQFV FYFIYSNLQI SLAFLVSSIF SKVKTVTVIA YILVYGTGLL GSFLFQKMIE TQSFPEEWIL AMELYPGFSL YRGLYEFSQY ASRGNGMKWQ
501: DLSDSGMGEV FCIMSVEWFL ALIVAYYIDQ VFTSGKHPFF FLVNLFKSPS SLPRRPTVQR LDSKRVFIDM DKHDVTQERE SVQKLRNEGS TGHAILCDNL
601: KKVYPGRDGN PPKMAVRGLY LSVSSGECFG MLGPNGAGKT SFISMMTGLL KPSSGTALVQ GLDICKDMNK VYTSMGVCPQ HDLLWETLTG REHLLFYGRL
701: KNIKGSDLTQ AVEESLKSVS LYDGGVGDKP AGNYSGGMKR RLSVAISLIG NPKVVYLDEP STGLDPASRK NLWNVIKRAK QNTAIILTTH SMEEAEFLCD
801: RLGIFVDGGL QCIGNSKELK SRYGGSYVFT MTTSSKHEEE VERLVESVSP NAKKIYHLAG TQKFELPKQE VRIAEVFRAV EKAKANFTVF AWGLADTTLE
901: DVFIKVARTA QAFISLS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.