Factsheet for AT3G47760.3

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
endoplasmic reticulum 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G47750.1	Thale cress	mitochondrion, plasma membrane	85.68	85.59
AT3G47770.2	Thale cress	endoplasmic reticulum, golgi, plasma membrane, plastid	80.02	80.89
CDY36932	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	74.89	79.12
Bra018115.1-P	Field mustard	plasma membrane	78.21	79.05
Bra018114.1-P	Field mustard	cytosol, peroxisome, plasma membrane	52.99	78.86
CDY24158	Canola	plasma membrane	77.88	78.73
AT3G47740.1	Thale cress	plasma membrane	77.88	78.22
CDY24157	Canola	plastid	77.67	76.45
CDY36931	Canola	plastid	75.96	76.37
AT3G47780.1	Thale cress	plasma membrane	76.28	76.36
AT5G61740.1	Thale cress	plasma membrane	65.17	67.11
AT5G61700.1	Thale cress	plasma membrane	65.6	66.96
KRH54520	Soybean	plasma membrane, plastid	57.16	66.29
AT3G47790.1	Thale cress	plasma membrane	63.57	66.04
Solyc03g113040.2.1	Tomato	plastid	64.0	63.39
KRH63384	Soybean	plasma membrane	48.82	62.77
Solyc06g070920.2.1	Tomato	extracellular, plasma membrane	42.41	62.23
Solyc03g113060.2.1	Tomato	extracellular	61.65	61.12
TraesCS7A01G367700.1	Wheat	plasma membrane	37.07	61.09
KRG88422	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	31.94	60.9
KRH56933	Soybean	plasma membrane, plastid	60.36	59.54
KRH03450	Soybean	plasma membrane, plastid	60.26	59.12
KXG25097	Sorghum	plasma membrane	55.98	54.7
TraesCS1A01G343000.1	Wheat	plasma membrane	55.66	54.67
TraesCS1D01G345200.1	Wheat	plasma membrane	55.56	54.62
TraesCS1B01G356200.1	Wheat	plasma membrane	55.23	54.31
Os08t0398300-01	Rice	plasma membrane	55.23	54.02
HORVU4Hr1G087670.8	Barley	mitochondrion	55.23	53.85
TraesCS7D01G355100.1	Wheat	plastid	54.81	53.72
Os06t0589300-01	Rice	plasma membrane	54.38	53.64
VIT_07s0095g00600.t01	Wine grape	extracellular	3.95	53.62
HORVU1Hr1G075620.5	Barley	plasma membrane	54.49	53.46
TraesCS7B01G260800.1	Wheat	plastid	54.59	53.45
Zm00001d020208_P003	Maize	plasma membrane	54.06	53.38
OQU89360	Sorghum	plasma membrane	54.06	53.38
Solyc06g070950.1.1	Tomato	plasma membrane	50.64	53.2
TraesCS4B01G365000.1	Wheat	plasma membrane	55.77	53.05
Zm00001d050259_P002	Maize	plasma membrane	55.56	52.85
Zm00001d036927_P001	Maize	plasma membrane, plastid	54.27	52.64
TraesCS5D01G195700.1	Wheat	plasma membrane	53.1	52.54
EER89983	Sorghum	plastid	53.53	52.52
TraesCS5A01G193200.1	Wheat	plasma membrane	52.78	52.22
TraesCSU01G138200.1	Wheat	plasma membrane	55.45	52.0
HORVU7Hr1G085680.2	Barley	endoplasmic reticulum, peroxisome, plastid	54.49	51.46
TraesCS5A01G534100.3	Wheat	cytosol	55.34	51.29
TraesCS5B01G188600.1	Wheat	plasma membrane	52.03	51.26
TraesCS3D01G368700.2	Wheat	plasma membrane	52.99	51.24
HORVU5Hr1G056930.20	Barley	plasma membrane	53.1	50.87
GSMUA_Achr7P23890_001	Banana	plasma membrane	58.97	47.18
GSMUA_Achr3P20510_001	Banana	plasma membrane	56.3	44.93
HORVU6Hr1G043820.1	Barley	cytosol, endoplasmic reticulum, plasma membrane	7.05	39.29
HORVU3Hr1G030470.1	Barley	cytosol, extracellular, plasma membrane	7.05	39.29
HORVU4Hr1G039510.1	Barley	cytosol	6.73	37.5
Solyc06g070930.2.1	Tomato	plastid	10.68	36.5
AT5G61730.2	Thale cress	plasma membrane, plastid	23.93	23.58
AT5G14100.1	Thale cress	plastid	6.84	23.02
AT5G61690.2	Thale cress	plasma membrane	23.4	22.98
AT1G67940.1	Thale cress	cytosol	6.41	22.81
AT3G47730.1	Thale cress	mitochondrion, plasma membrane	23.93	22.79
AT1G65410.1	Thale cress	plastid	7.69	20.87
AT2G41700.1	Thale cress	mitochondrion, plasma membrane	20.83	10.36

Protein Annotations

MapMan:24.1.3.2.1	Gene3D:3.40.50.300	EntrezGene:823930	InterPro:AAA+_ATPase	InterPro:ABCA	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	ProteinID:ANM63942.1	ArrayExpress:AT3G47760	EnsemblPlantsGene:AT3G47760	RefSeq:AT3G47760	TAIR:AT3G47760
RefSeq:AT3G47760-TAIR-G	EnsemblPlants:AT3G47760.3	Symbol:ATATH4	ProteinID:CAB41859.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0043231	GO:GO:0055085	InterPro:IPR003439
RefSeq:NP_001326002.1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF12698	ScanProsite:PS00211	PFscan:PS50893
PANTHER:PTHR19229	PANTHER:PTHR19229:SF141	UniProt:Q9STT7	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix
UniParc:UPI0001B04BC5	SEG:seg	:	:	:	:

Description

ABCA5ABC transporter A family member 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT7]

Coordinates

chr3:+:17611787..17616639

Molecular Weight (calculated)

105590.0 Da

IEP (calculated)

8.400

GRAVY (calculated)

-0.031

Length

936 amino acids

Sequence
(BLAST)

001: MGNHVPAGFF TQANSLFRKN LTYQKRNIWS NVRLIVIPFY LCVLLVGIQV LFDTQVNNSA DNRCGCRCID KNGDGKCGQK SCGLQYSSQN QAFFCAFPNP
101: PPLLPLLHIP RPETRSSDRD RDSCRQTGSC PVTILLTGNN HSLGTTISRN LLSTSFAMNS SDLFLRNLAY NVLGTTSKAD YTNYLDPGIL SDLPIFNVQP
201: RCTPDTTTFS FPFRQSPLEF HKEVRCVEGL NLWRNNSIEI SNEIFKGYRQ GNLEEIINEV AAAYDLMDTD INNFNVTIWY NSTYKGDLRD RRVKYVRVPR
301: SVNLVSNAYL EFLQGSGTKM LFDFVKEMPK QETRLRLEMA SLIGPIFFTW VILLLFPVML TSLVYEKQQH LRIIMKMHGL GDGPYWMITY AYFLAISIVY
401: IICLMIFGSA IGLKFFRFND YSIQFIFYFL CINLQISIAF LVSSAFSKIE TASVAAYLYV FGSGLLGAFL FQFLLEGLSF PRSWIYIMEL YPGFSLYRGL
501: YEFSQYAFKR NLNGSGGMKW KDFNDSAMEE IFYIIIVEWF VALIAAYYTD KISSSGIDPF FFLKNQNPFK KSPSPYGLQR QVSAIAIEME KLDVAHERVK
601: VEQLMLETST GHAIVCDNLK KVYPCRDGNP QKMAVRGLSL AVPSGECFGM LGPNGAGKTS FINMMTGLMK PTSGAAFVHG LDICKDMDIV YTSIGVCPQH
701: DLLWETLTGR EHLLFYGRLK NLKGSDLDQA VEESLKSVNL FRGGVADKPA GKYSGGMKRR LSVAISLIGS PKVVYMDEPS TGLDPASRRS LWTAIKRAKN
801: HTAIILTTHS MEEAEFLCDR LGIFVDGRLQ CVGNPKELKA RYGGSYVLTM TTPSEHEKDV EMLVQDVSPN AKKIYHIAGT QKFEIPKEEV RISEVFQAVE
901: KAKDNFRVFA WGLADTTLED VFIKVARTAQ ASNVFS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.