Factsheet for Solyc06g070930.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 3
extracellular 1
endoplasmic reticulum 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400083071	Potato	plasma membrane	85.77	25.13
KRH63384	Soybean	plasma membrane	42.34	15.93
CDY24156	Canola	plasma membrane	43.43	12.63
VIT_17s0000g05860.t01	Wine grape	plasma membrane, plastid	43.07	12.43
CDY36930	Canola	plasma membrane	42.7	12.42
Solyc03g113060.2.1	Tomato	extracellular	42.7	12.39
Bra018113.1-P	Field mustard	plasma membrane	42.34	12.31
Solyc03g113040.2.1	Tomato	plastid	42.34	12.28
CDX77874	Canola	plasma membrane	36.86	12.18
CDX68441	Canola	plasma membrane	41.24	12.0
KRH56933	Soybean	plasma membrane, plastid	40.88	11.8
Bra033785.1-P	Field mustard	plasma membrane	40.51	11.78
CDX83025	Canola	plasma membrane	40.15	11.68
AT3G47780.1	Thale cress	plasma membrane	39.42	11.55
AT3G47790.1	Thale cress	plasma membrane	37.96	11.54
HORVU4Hr1G087670.8	Barley	mitochondrion	40.15	11.46
KRH03450	Soybean	plasma membrane, plastid	39.78	11.43
AT3G47750.1	Thale cress	mitochondrion, plasma membrane	38.69	11.31
TraesCS4B01G365000.1	Wheat	plasma membrane	40.51	11.28
CDY24158	Canola	plasma membrane	37.96	11.23
TraesCS5A01G534100.3	Wheat	cytosol	41.24	11.19
AT5G61740.1	Thale cress	plasma membrane	36.86	11.11
TraesCS5D01G195700.1	Wheat	plasma membrane	38.32	11.1
Bra019513.1-P	Field mustard	plasma membrane	36.13	11.09
Bra015049.1-P	Field mustard	plasma membrane	36.13	11.09
CDY02114	Canola	plasma membrane	35.77	11.05
CDY23039	Canola	plasma membrane	35.77	11.04
TraesCSU01G138200.1	Wheat	plasma membrane	40.15	11.02
HORVU1Hr1G075620.5	Barley	plasma membrane	38.32	11.01
TraesCS5A01G193200.1	Wheat	plasma membrane	37.96	10.99
CDY21797	Canola	plasma membrane	36.13	10.95
CDY62599	Canola	plasma membrane	34.67	10.93
TraesCS3D01G368700.2	Wheat	plasma membrane	38.32	10.85
AT3G47740.1	Thale cress	plasma membrane	36.86	10.84
TraesCS1B01G356200.1	Wheat	plasma membrane	37.59	10.82
TraesCS1D01G345200.1	Wheat	plasma membrane	37.59	10.82
TraesCS1A01G343000.1	Wheat	plasma membrane	37.59	10.81
CDY39546	Canola	plasma membrane	36.86	10.8
AT3G47770.2	Thale cress	endoplasmic reticulum, golgi, plasma membrane, plastid	36.5	10.8
TraesCS7D01G355100.1	Wheat	plastid	37.59	10.79
Os06t0589300-01	Rice	plasma membrane	37.23	10.75
CDY36931	Canola	plastid	36.5	10.74
CDX77421	Canola	plasma membrane	36.5	10.7
AT3G47760.3	Thale cress	plasma membrane	36.5	10.68
HORVU5Hr1G056930.20	Barley	plasma membrane	37.96	10.64
Bra018115.1-P	Field mustard	plasma membrane	35.77	10.58
TraesCS7B01G260800.1	Wheat	plastid	36.86	10.56
EER89983	Sorghum	plastid	36.5	10.48
Zm00001d036927_P001	Maize	plasma membrane, plastid	36.86	10.47
CDY24157	Canola	plastid	36.13	10.41
OQU89360	Sorghum	plasma membrane	35.77	10.34
KXG25097	Sorghum	plasma membrane	36.13	10.33
HORVU7Hr1G085680.2	Barley	endoplasmic reticulum, peroxisome, plastid	37.23	10.29
Os08t0398300-01	Rice	plasma membrane	35.77	10.24
Zm00001d020208_P003	Maize	plasma membrane	35.04	10.13
Zm00001d050259_P002	Maize	plasma membrane	36.13	10.06
TraesCS5B01G188600.1	Wheat	plasma membrane	34.67	10.0
CDY36932	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	32.12	9.93
AT5G61700.1	Thale cress	plasma membrane	33.21	9.92
GSMUA_Achr7P23890_001	Banana	plasma membrane	40.88	9.57
Solyc06g070950.1.1	Tomato	plasma membrane	28.83	8.87
GSMUA_Achr3P20510_001	Banana	plasma membrane	36.13	8.44
Bra012931.1-P	Field mustard	cytosol, peroxisome, plasma membrane	17.52	8.11
Bra012927.1-P	Field mustard	cytosol	17.52	7.8
VIT_18s0041g02240.t01	Wine grape	plasma membrane	17.88	6.66
CDY23798	Canola	nucleus, peroxisome, plasma membrane	8.76	6.25
KRH54520	Soybean	plasma membrane, plastid	18.25	6.2
KRG88422	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	10.22	5.7
Solyc03g113070.2.1	Tomato	plasma membrane	10.22	4.86
CDY02120	Canola	cytosol, nucleus, plasma membrane	10.22	4.25
CDY31786	Canola	cytosol, nucleus, plasma membrane	10.22	4.24
Bra033786.1-P	Field mustard	cytosol, mitochondrion, nucleus	3.28	3.02
Bra018114.1-P	Field mustard	cytosol, peroxisome, plasma membrane	6.57	2.86
Solyc06g070960.1.1	Tomato	plasma membrane	9.12	2.7
Solyc06g070940.2.1	Tomato	plasma membrane	9.12	2.65
Solyc04g015970.2.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	8.03	1.15
CDX94927	Canola	cytosol	0.36	0.84
CDX68440	Canola	cytosol, mitochondrion	0.36	0.72
CDX68438	Canola	endoplasmic reticulum, extracellular, plasma membrane	1.09	0.7
Solyc06g070920.2.1	Tomato	extracellular, plasma membrane	1.46	0.63
CDY23043	Canola	cytosol, mitochondrion	1.09	0.59
Solyc04g056650.2.1	Tomato	plastid	0.73	0.57
Solyc03g113080.2.1	Tomato	cytosol	0.36	0.28
VIT_12s0055g00730.t01	Wine grape	extracellular	0.0	0.0
CDX68439	Canola	nucleus	0.0	0.0
TraesCS7A01G367700.1	Wheat	plasma membrane	0.0	0.0
HORVU3Hr1G030470.1	Barley	cytosol, extracellular, plasma membrane	0.0	0.0
HORVU4Hr1G039510.1	Barley	cytosol	0.0	0.0
Solyc06g068600.2.1	Tomato	cytosol	0.0	0.0
Solyc03g117810.2.1	Tomato	cytosol	0.0	0.0
HORVU6Hr1G043820.1	Barley	cytosol, endoplasmic reticulum, plasma membrane	0.0	0.0
Solyc02g068180.2.1	Tomato	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:Solyc06g070930.2.1	EnsemblPlantsGene:Solyc06g070930.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0042626
GO:GO:0055085	InterPro:ABCA	PANTHER:PTHR19229	PANTHER:PTHR19229:SF141	SEG:seg	UniParc:UPI0002766D35
UniProt:K4C8G6	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr6:-:43558326..43560744

Molecular Weight (calculated)

30122.9 Da

IEP (calculated)

5.997

GRAVY (calculated)

-0.236

Length

274 amino acids

Sequence
(BLAST)

001: MADSVTAPAT YGTQADALLR KNLAFQKRNV KTNVRLILVP ISLLLLIRAI EFSSTVMTAK DTKCGCQCVE KNGTGKCVKE CGLQYSNPLQ AASCEVKEPY
101: EWHPVFQLPE PQFSAVKSDV ITYPDLPNES CRDSNSCPAI ILVTGSNQTF GQSLSGNMVK NDTTVEPTFI TNRIIGTEIP AARTSFQNPA FYSPKATLYI
201: IQAGCPADFK GLDIYDNYGS YMLQCRTGLS LWRNSPSEIN DELFKGYIMG NTEKKTGEIA AAYDWLNTNA NSSM

Best Arabidopsis Sequence Match ( AT3G47740.1 )
(BLAST)

001: MADSGPASFW TRANAILRKN LTYQKRNIWS NVRLIMIPFY LCIVLVFIQA LFDSQVNNSL DNQCGCQCID KLGDGKCQMT CGLEYSTRDQ GFFCAIPKPQ
101: PWPPLILIPR PEYRALDANF TNDSCRRKNS CPVTILFTGN NHSLGAVLSR NLLRRPFAMN SSDLLFSLAN NVLATTFKGS ATNYLDAGIV SDGSIYNIQP
201: RCPPNSNFSI SIGQSPLNFT KDMRCVQGLN LWRNNSIEVN LELFEGYHKG NSDGMINEIV AAYDLFDTNM TNFNVNIWFN ATYKDEARNQ PYKVVRVPRL
301: VNWVSNAYLQ YLQGPRTKML FEFVKEMPKP ETKLRLDIAS LIGPIFFTWV ILLLLPVILN SLVYEKQQRL RIIMKMHGLG DGPYWIISYA YFLALSTFYI
401: IFLMIFGSVI GLKFFLLNDF SLQFSFYFVY INLQISIAFL LSSAFSKVET ASVAAYLYVF GSGLLGMFLF QFLLEGLSFP RRWIFVMELY PGFSLYRGLY
501: EFSQNAYQGN LNGKDGMKWK YFSDNAIDEV FYIIIVEWFV ALIATYYIDK MSSSGKDLLF FLKNQNPFKI SHSLQKQVSA ISVEMEKLDV IHESEKVAQL
601: MLESSTSHAI VCDKLRKVYP GRDGNPPKKA VRVLSLAVPS GECFGMLGPN GAGKTSFINM MTGLVKPTSG AAFVQGLDIC KDMDRVYTSM GVCPQHDLLW
701: ETLTGREHLL FYGRLKNLKG VDLNQAVEES LRSVNLFHGG VADKPAGKYS GGMKRRLSVA ISLIGNPKVV YMDEPSTGLD PASRKNLWTV IKNAKRHTAI
801: ILTTHSMEEA EFLCDRLGIF VDGRLQCIGN PKELKGRYGG SYVLTMTTSS EHEKDVEMLV QEVSPNVKKI YHIAGTQKFE IPKDEVRISE VFQVVEKAKS
901: NFKVFAWGLA DTTLEDVFIK VARTAQAFNV FS

Arabidopsis Description

ABCA3ABC transporter A family member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEH6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.