Factsheet for Solyc03g113060.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 3
endoplasmic reticulum 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

extracellular: 29876421

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g113040.2.1	Tomato	plastid	84.11	84.02
CDX94927	Canola	cytosol	9.64	76.47
VIT_17s0000g05860.t01	Wine grape	plasma membrane, plastid	72.78	72.39
KRH54520	Soybean	plasma membrane, plastid	61.55	72.0
KRG88422	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	35.91	69.04
KRH63384	Soybean	plasma membrane	52.86	68.54
CDY02120	Canola	cytosol, nucleus, plasma membrane	47.67	68.29
VIT_12s0055g00730.t01	Wine grape	extracellular	9.11	67.72
CDY31786	Canola	cytosol, nucleus, plasma membrane	47.14	67.42
Solyc06g070920.2.1	Tomato	extracellular, plasma membrane	44.92	66.46
Bra018114.1-P	Field mustard	cytosol, peroxisome, plasma membrane	43.96	65.98
AT3G47780.1	Thale cress	plasma membrane	64.72	65.35
Bra018113.1-P	Field mustard	plasma membrane	64.83	64.97
CDY24156	Canola	plasma membrane	64.83	64.97
CDY36930	Canola	plasma membrane	64.83	64.97
AT3G47790.1	Thale cress	plasma membrane	61.97	64.93
KRH56933	Soybean	plasma membrane, plastid	64.72	64.38
Bra033785.1-P	Field mustard	plasma membrane	64.19	64.33
CDX83025	Canola	plasma membrane	64.09	64.23
KRH03450	Soybean	plasma membrane, plastid	64.41	63.73
Bra019513.1-P	Field mustard	plasma membrane	60.28	63.72
CDX68441	Canola	plasma membrane	62.82	62.95
CDY21797	Canola	plasma membrane	60.17	62.83
CDY36932	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	58.9	62.75
TraesCS7A01G367700.1	Wheat	plasma membrane	37.71	62.68
AT5G61700.1	Thale cress	plasma membrane	60.59	62.38
CDX77874	Canola	plasma membrane	54.66	62.24
AT5G61740.1	Thale cress	plasma membrane	59.75	62.05
AT3G47740.1	Thale cress	plasma membrane	61.23	62.02
Bra018115.1-P	Field mustard	plasma membrane	60.7	61.88
CDX77421	Canola	plasma membrane	61.23	61.82
AT3G47760.3	Thale cress	plasma membrane	61.12	61.65
CDY24158	Canola	plasma membrane	60.38	61.56
TraesCS1A01G343000.1	Wheat	plasma membrane	61.97	61.39
CDY39546	Canola	plasma membrane	60.7	61.28
Bra015049.1-P	Field mustard	plasma membrane	57.94	61.25
TraesCS1D01G345200.1	Wheat	plasma membrane	61.76	61.24
KXG25097	Sorghum	plasma membrane	62.08	61.17
AT3G47750.1	Thale cress	mitochondrion, plasma membrane	60.59	61.05
CDY23043	Canola	cytosol, mitochondrion	33.05	60.94
TraesCS1B01G356200.1	Wheat	plasma membrane	61.44	60.92
AT3G47770.2	Thale cress	endoplasmic reticulum, golgi, plasma membrane, plastid	59.75	60.91
CDY62599	Canola	plasma membrane	56.04	60.87
HORVU1Hr1G075620.5	Barley	plasma membrane	61.44	60.8
Bra012931.1-P	Field mustard	cytosol, peroxisome, plasma membrane	38.03	60.64
CDX68440	Canola	cytosol, mitochondrion	8.9	60.43
CDY36931	Canola	plastid	59.53	60.37
CDY02114	Canola	plasma membrane	56.67	60.32
CDY24157	Canola	plastid	60.7	60.25
TraesCS5D01G195700.1	Wheat	plasma membrane	60.17	60.04
Os08t0398300-01	Rice	plasma membrane	60.81	59.98
TraesCS5A01G193200.1	Wheat	plasma membrane	59.85	59.73
CDY23039	Canola	plasma membrane	56.14	59.68
HORVU4Hr1G087670.8	Barley	mitochondrion	59.96	58.96
Zm00001d050259_P002	Maize	plasma membrane	61.12	58.64
OQU89360	Sorghum	plasma membrane	58.69	58.44
TraesCS5B01G188600.1	Wheat	plasma membrane	58.79	58.42
Zm00001d020208_P003	Maize	plasma membrane	58.37	58.12
TraesCS4B01G365000.1	Wheat	plasma membrane	59.96	57.52
HORVU5Hr1G056930.20	Barley	plasma membrane	58.9	56.91
Os06t0589300-01	Rice	plasma membrane	56.89	56.59
Solyc06g070950.1.1	Tomato	plasma membrane	53.28	56.45
TraesCSU01G138200.1	Wheat	plasma membrane	59.64	56.41
TraesCS7D01G355100.1	Wheat	plastid	56.78	56.13
CDY23798	Canola	nucleus, peroxisome, plasma membrane	22.78	55.99
TraesCS7B01G260800.1	Wheat	plastid	56.67	55.96
EER89983	Sorghum	plastid	56.36	55.77
TraesCS5A01G534100.3	Wheat	cytosol	59.64	55.74
Bra033786.1-P	Field mustard	cytosol, mitochondrion, nucleus	17.58	55.7
Bra012927.1-P	Field mustard	cytosol	36.12	55.45
Zm00001d036927_P001	Maize	plasma membrane, plastid	56.14	54.92
TraesCS3D01G368700.2	Wheat	plasma membrane	56.04	54.65
HORVU7Hr1G085680.2	Barley	endoplasmic reticulum, peroxisome, plastid	56.78	54.09
GSMUA_Achr7P23890_001	Banana	plasma membrane	65.04	52.48
VIT_18s0041g02240.t01	Wine grape	plasma membrane	39.41	50.54
GSMUA_Achr3P20510_001	Banana	plasma membrane	61.86	49.79
CDX68438	Canola	endoplasmic reticulum, extracellular, plasma membrane	22.25	49.3
CDX68439	Canola	nucleus	7.63	45.57
HORVU3Hr1G030470.1	Barley	cytosol, extracellular, plasma membrane	7.73	43.45
HORVU6Hr1G043820.1	Barley	cytosol, endoplasmic reticulum, plasma membrane	7.73	43.45
Solyc06g070930.2.1	Tomato	plastid	12.39	42.7
HORVU4Hr1G039510.1	Barley	cytosol	7.52	42.26
Solyc03g113080.2.1	Tomato	cytosol	10.7	28.21
Solyc06g068600.2.1	Tomato	cytosol	4.87	24.86
Solyc06g070960.1.1	Tomato	plasma membrane	23.83	24.3
Solyc02g068180.2.1	Tomato	plastid	6.99	24.09
Solyc06g070940.2.1	Tomato	plasma membrane	23.94	23.97
Solyc03g117810.2.1	Tomato	cytosol	6.67	23.95
Solyc04g056650.2.1	Tomato	plastid	8.26	22.29
Solyc03g113070.2.1	Tomato	plasma membrane	13.56	22.22
Solyc04g015970.2.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	20.34	10.06

Protein Annotations

MapMan:24.1.3.2.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCA	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0043231
GO:GO:0055085	InterPro:IPR003439	UniProt:K4BKF9	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF12698
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19229	PANTHER:PTHR19229:SF141	SMART:SM00382	SUPFAM:SSF52540
EnsemblPlantsGene:Solyc03g113060.2	EnsemblPlants:Solyc03g113060.2.1	TMHMM:TMhelix	UniParc:UPI0002767A2E	SEG:seg	:

Description

No Description!

Coordinates

chr3:-:63352312..63360138

Molecular Weight (calculated)

106440.0 Da

IEP (calculated)

6.845

GRAVY (calculated)

-0.064

Length

944 amino acids

Sequence
(BLAST)

001: MADSVHGPTS FSTQANALLR KNFTFQKRDI KSNIRLISVP IILCLLLVFL QNWVNKELDK PWNRCGCKCI DENGEGKCEE VCGIEYSDLN QAISCSIPRP
101: LEWPPLLQIP ESTDRAVQTD FISYGDLPDD SCKISGSCPA TILLTGTNQT LGESMGTNLF SSGSTLDYSD IFYSLAYNVL GSESQTKYMN FLEAAFFSNQ
201: TVYNVQSQCS PDFTFSLPLD FGSVAVQQEI SCVKGLHLWR NSSHEINDEL HKGYMNGNPE RKINEIIAAY DFLNSNRNGF NVSIWYNSSY KNGKSNQPLA
301: LTRVPRSVNL ASNAYILDLL GPSARILFEF VKEMPKPETK LNLDFASLLG PLFFTWVVSQ LFPVVLIALV YEKQQKLRIM MKMHGLGDGP YWLISYAYFL
401: FVASIYMLCF VIFGSLVGLK FFLLNDYAIQ FVFYFIYINL QESLAFLVAA FFSNVQAATV IGYIMVFANG LLSSFLFQFF LQDETFSRGW IIVMELYPGF
501: SLFRGLYEFS HYAFKGNYLG TDGMRWKDLS DRKNGMKEVL IIMLVQWLVF LFLGYYIDQI ASSGKYSLCF MWHSRKRPSP SSRKHSFRRQ GSKVFVQMEK
601: PDVAQERERV EQLLESSTGH AVICDNLEKV YPGKDGNPEK FAVRGLSLAL PQGECFGMLG PNGAGKTTFI NMMIGLIKPS SGTAYAQGMD IRTDMDMIYT
701: NMGVCPQHDL LWEILTGREH LLFYGRLKNL EGADLTQAVE ESLKSVNLFH GGVADKKAGK YSGGMKRRLS VAISLIGDPK VVYMDEPSTG LDPSSRSNLW
801: NVVKRAKQDR AIILTTHSME EAEHLCDRLG IFVDGSLQCI GNPKELKARY GGSYVFTMTT SSDNEEEVEH MVQRLSPNAN RIYHLSGTQK FELPKQEVRI
901: ADVFQAVEKA KSRFTVYAWG LADTTLEDVF IKVAHTAQAF NVLS

Best Arabidopsis Sequence Match ( AT3G47780.1 )
(BLAST)

001: MADPGPASFS TRANALLRKN LTYQKRNLWS NIRLIMIPFY LCILLVIIQI LFDTQVNNSA DNRCGCECIE RNRAGKCQRE LCGLEHSKPD QAFFCSIPRP
101: PLWPPLLQIP RPESRDVRGL RDDSCRRTGS CPVTILFTGN NRSLGTTVSE NLFTSSVSAN ASEILRTLAN NVLGTTVEAD FTNYLDPGIA SNLSIYNIQP
201: RCILNATFPF SFEQPPLKFE KELRCVQGSN LWTNTSKEVN DKIFKGYKKG NPEGKINEIA AAYDLLNTDR NNFNVHIWYN STYKDDAGNR LIKLIRVPRS
301: VNLVSNAYLQ FLQGPGTRML FEYVKEMPKP ETSLRLDIAS LIGPLFFTWV ILLLFPVILS SLVYEKQQHL RIIMKMHGLG DGPYWMISYA YFLTISVLYV
401: ICLMIFGSAI GLKFFRLNSY SIQFVFYFLY LNLQIALAFL VSSVFSKVKT STVASYIYVF GSGLLGLFLL NFLIEDSSFP RGWIIVMELY PGFSLYRGLY
501: ELAQFAFRGN LRGEDGMKWK DFGDSAMDDV FYIIVVEWFL ALIAAYYIDK ISSSGRNPLF FLQNPFKKSP SLRRPSLQRQ GSKVSVDMEK PDVTHESKKV
601: ERLMLESSTS HAIVCDNLKK VYPGRDGNPP KLAVRGLSLA VPSGECFGML GPNGAGKTSF INMMTGLLKP TSGTALVQGL DICNDMDRVY TSMGVCPQHD
701: LLWETLTGRE HLLFYGRLKN LKGADLNQAV EESLKSVNLF HGGVADKPAG KYSGGMKRRL SVAISLIGNP KVVYMDEPST GLDPASRKNL WTVIKRAKQN
801: TAIILTTHSM EEAEFLCDRL GIFVDGGLQC IGNPKELKGR YGGSYVFTMT TSSEHEQNVE KLIKDVSPNA KKIYHIAGTQ KFELPKEEVR ISEVFQAVEK
901: AKSNFTVFAW GLADTTLEDV FIKVVRNGQA FNVFS

Arabidopsis Description

ABCA7ABC transporter A family member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.