Factsheet for TraesCS3D01G368700.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
endoplasmic reticulum 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	endoplasmic reticulum, plasma membrane, plastid
ChloroP:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G345200.1	Wheat	plasma membrane	78.82	80.15
KXG25097	Sorghum	plasma membrane	73.66	74.43
Os08t0398300-01	Rice	plasma membrane	73.55	74.4
Zm00001d050259_P002	Maize	plasma membrane	73.97	72.76
TraesCS5D01G195700.1	Wheat	plasma membrane	66.53	68.08
CDX94927	Canola	cytosol	7.95	64.71
KRH54520	Soybean	plasma membrane, plastid	50.83	60.97
VIT_17s0000g05860.t01	Wine grape	plasma membrane, plastid	58.88	60.06
PGSC0003DMT400083070	Potato	cytosol	7.64	59.68
Solyc03g113040.2.1	Tomato	plastid	57.33	58.73
CDY02120	Canola	cytosol, nucleus, plasma membrane	39.98	58.73
CDY31786	Canola	cytosol, nucleus, plasma membrane	39.67	58.18
KRH63384	Soybean	plasma membrane	43.7	58.1
KRG88422	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	29.34	57.84
Solyc06g070920.2.1	Tomato	extracellular, plasma membrane	38.12	57.84
Bra018114.1-P	Field mustard	cytosol, peroxisome, plasma membrane	37.09	57.07
VIT_07s0095g00600.t01	Wine grape	extracellular	4.03	56.52
CDX83025	Canola	plasma membrane	54.96	56.48
AT3G47790.1	Thale cress	plasma membrane	52.48	56.38
Bra033785.1-P	Field mustard	plasma membrane	54.75	56.26
AT3G47780.1	Thale cress	plasma membrane	54.24	56.15
Bra019513.1-P	Field mustard	plasma membrane	51.76	56.1
Bra018113.1-P	Field mustard	plasma membrane	54.55	56.05
CDX68441	Canola	plasma membrane	54.55	56.05
Solyc03g113060.2.1	Tomato	extracellular	54.65	56.04
CDY36930	Canola	plasma membrane	54.44	55.94
CDY24156	Canola	plasma membrane	54.34	55.84
CDY21797	Canola	plasma membrane	51.55	55.2
KRH56933	Soybean	plasma membrane, plastid	54.03	55.11
CDY36932	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	49.79	54.4
VIT_12s0055g00730.t01	Wine grape	extracellular	7.13	54.33
AT3G47750.1	Thale cress	mitochondrion, plasma membrane	52.48	54.22
CDY24158	Canola	plasma membrane	51.76	54.1
KRH03450	Soybean	plasma membrane, plastid	53.31	54.09
CDX77874	Canola	plasma membrane	46.18	53.92
AT5G61740.1	Thale cress	plasma membrane	50.41	53.69
Bra018115.1-P	Field mustard	plasma membrane	51.34	53.67
AT5G61700.1	Thale cress	plasma membrane	50.62	53.44
TraesCS1D01G345300.1	Wheat	mitochondrion, plasma membrane	52.07	53.22
AT3G47740.1	Thale cress	plasma membrane	51.24	53.22
CDX77421	Canola	plasma membrane	51.34	53.16
AT3G47760.3	Thale cress	plasma membrane	51.24	52.99
CDY23043	Canola	cytosol, mitochondrion	28.0	52.93
Bra015049.1-P	Field mustard	plasma membrane	48.76	52.86
CDY39546	Canola	plasma membrane	50.93	52.73
CDY02114	Canola	plasma membrane	48.04	52.42
AT3G47770.2	Thale cress	endoplasmic reticulum, golgi, plasma membrane, plastid	50.0	52.27
CDY23039	Canola	plasma membrane	47.93	52.25
CDY62599	Canola	plasma membrane	46.8	52.13
Solyc06g070950.1.1	Tomato	plasma membrane	47.93	52.08
TraesCS7D01G355100.1	Wheat	plastid	51.34	52.04
GSMUA_Achr7P23890_001	Banana	plasma membrane	62.6	51.79
PGSC0003DMT400083071	Potato	plasma membrane	49.38	51.12
CDX68440	Canola	cytosol, mitochondrion	7.33	51.08
CDY36931	Canola	plastid	48.76	50.7
CDY24157	Canola	plastid	49.79	50.68
Bra012931.1-P	Field mustard	cytosol, peroxisome, plasma membrane	30.48	49.83
CDY23798	Canola	nucleus, peroxisome, plasma membrane	19.73	49.74
GSMUA_Achr3P20510_001	Banana	plasma membrane	58.68	48.42
Bra012927.1-P	Field mustard	cytosol	30.58	48.13
TraesCS6D01G170100.1	Wheat	plastid	45.76	47.38
Bra033786.1-P	Field mustard	cytosol, mitochondrion, nucleus	13.84	44.97
CDX68438	Canola	endoplasmic reticulum, extracellular, plasma membrane	19.73	44.84
VIT_18s0041g02240.t01	Wine grape	plasma membrane	33.78	44.43
CDX68439	Canola	nucleus	6.71	41.14
Solyc06g070930.2.1	Tomato	plastid	10.85	38.32
TraesCS3D01G393600.2	Wheat	plastid	7.02	24.64
TraesCS1D01G345100.2	Wheat	mitochondrion, plasma membrane, plastid	22.83	22.9
TraesCS7D01G420100.1	Wheat	cytosol, golgi, mitochondrion	5.79	21.29
TraesCS4D01G332100.1	Wheat	cytosol	6.1	20.63
TraesCS5D01G377300.1	Wheat	cytosol, peroxisome, plastid	6.82	16.71

Protein Annotations

MapMan:24.1.3.2.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCA	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF12698	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19229	PANTHER:PTHR19229:SF141	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3D01G368700	EnsemblPlants:TraesCS3D01G368700.2	TIGR:cd03263	SEG:seg

Description

No Description!

Coordinates

chr3D:-:481909293..481926549

Molecular Weight (calculated)

107834.0 Da

IEP (calculated)

9.467

GRAVY (calculated)

0.029

Length

968 amino acids

Sequence
(BLAST)

001: MDSSTGSRGP AGFATQANAL FRKNLCFQKR NLKTNACITV YPILVCVLLV LMQRPIDNRI DPSKYSCGCA CVDTAADGSC RRTECGAQHS TPDQVAYCQI
101: LSPPRWPALI QVPRPQSRAV RTASQPSNGL PEPTCRVTRS CPAAFLVTGS NRSLTESLSG ELFPALSSPL NFTDYLDTLS NIVSGSDTVT LRRQLLEPTF
201: ISEDTLYVVQ PRRQSNLSQN VSVNAGMIPL RLTPKMSADA CADSDRSSLK CSLPQPDVDC IQGLSLWRKS ASVINDELFK GYRQRGSGGG KTNEFVAGYD
301: FLNTSKDSLD INIWFNSTYN RKVAYSPIAI LRVPRLVNMA SNAYIKFLKG SGAKMLLEYV KDMPKVGSKL KVQINSILST LLFTWIVELI FPVMLTYLVY
401: EKQQKLKIMM KMHGLKDGPY WMINYAYFFG LSAVYMILFV IFGSLIGLRL FTKNDYSIQF VFYLIHINVQ IVLAFFASSF FSSVKIATVV GYIYVFGSGL
501: LGGFLLHFFI EDTSFPKGSI VVMQMIPGFS LYRGLYEFSA FSGNENGTGG MKWANLSDPV NGMRTILIIM VIEWAILLPL AFYFDNVSLL DGRLRKRMLV
601: FFKCFRMRAV SFKRYSFGRL GSNVLVEMEN PDATLEREVV DHLLLEPNSN YATICDNLKK VYHGMDGNPD KLAVRGLSLA IPKGQCFGIL GPNGAGKTSF
701: ISMMTGLIPP TSGTAYVHGM DIRTDMDAIY TNMGVCPQHD LLWETLTGKE HLLFYGRLKN LKGVELLKAI DYSLKSVNLF HGGIGDKQVR KYSGGMKRRL
801: SVAISLIGDP KVVFMDEPST GLDPASRNKL WSVVKEAKKN RAIILTTHSM EEAEIVCDRL GIFVNGGFRC IANPKELKAR YGGTYIFTMT TSLEHEQEVA
901: RLVHRLSPSA KRIYHISGTQ KFELAKQEVK IANVFHEVES AKCRFNIHAW GLTDTTLEDV FIKVAKGA

Best Arabidopsis Sequence Match ( AT3G47740.1 )
(BLAST)

001: MADSGPASFW TRANAILRKN LTYQKRNIWS NVRLIMIPFY LCIVLVFIQA LFDSQVNNSL DNQCGCQCID KLGDGKCQMT CGLEYSTRDQ GFFCAIPKPQ
101: PWPPLILIPR PEYRALDANF TNDSCRRKNS CPVTILFTGN NHSLGAVLSR NLLRRPFAMN SSDLLFSLAN NVLATTFKGS ATNYLDAGIV SDGSIYNIQP
201: RCPPNSNFSI SIGQSPLNFT KDMRCVQGLN LWRNNSIEVN LELFEGYHKG NSDGMINEIV AAYDLFDTNM TNFNVNIWFN ATYKDEARNQ PYKVVRVPRL
301: VNWVSNAYLQ YLQGPRTKML FEFVKEMPKP ETKLRLDIAS LIGPIFFTWV ILLLLPVILN SLVYEKQQRL RIIMKMHGLG DGPYWIISYA YFLALSTFYI
401: IFLMIFGSVI GLKFFLLNDF SLQFSFYFVY INLQISIAFL LSSAFSKVET ASVAAYLYVF GSGLLGMFLF QFLLEGLSFP RRWIFVMELY PGFSLYRGLY
501: EFSQNAYQGN LNGKDGMKWK YFSDNAIDEV FYIIIVEWFV ALIATYYIDK MSSSGKDLLF FLKNQNPFKI SHSLQKQVSA ISVEMEKLDV IHESEKVAQL
601: MLESSTSHAI VCDKLRKVYP GRDGNPPKKA VRVLSLAVPS GECFGMLGPN GAGKTSFINM MTGLVKPTSG AAFVQGLDIC KDMDRVYTSM GVCPQHDLLW
701: ETLTGREHLL FYGRLKNLKG VDLNQAVEES LRSVNLFHGG VADKPAGKYS GGMKRRLSVA ISLIGNPKVV YMDEPSTGLD PASRKNLWTV IKNAKRHTAI
801: ILTTHSMEEA EFLCDRLGIF VDGRLQCIGN PKELKGRYGG SYVLTMTTSS EHEKDVEMLV QEVSPNVKKI YHIAGTQKFE IPKDEVRISE VFQVVEKAKS
901: NFKVFAWGLA DTTLEDVFIK VARTAQAFNV FS

Arabidopsis Description

ABCA3ABC transporter A family member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEH6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.