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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:
  • mitochondrion 4
  • plasma membrane 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1B01G356300.1 Wheat mitochondrion 96.83 97.14
TraesCS1A01G343200.1 Wheat mitochondrion 95.99 96.6
HORVU1Hr1G075610.7 Barley extracellular, mitochondrion, plasma membrane 89.12 91.44
Os08t0398350-00 Rice cytosol 67.69 76.22
OQU80391 Sorghum mitochondrion 74.97 75.77
Zm00001d050260_P001 Maize mitochondrion 69.06 66.53
TraesCS1D01G345200.1 Wheat plasma membrane 56.28 55.99
TraesCS5D01G195700.1 Wheat plasma membrane 54.8 54.86
TraesCS3D01G368700.2 Wheat plasma membrane 53.22 52.07
TraesCS7D01G355100.1 Wheat plastid 48.15 47.75
TraesCS6D01G170100.1 Wheat plastid 45.83 46.42
TraesCS3D01G393600.2 Wheat plastid 7.5 25.72
TraesCS7D01G420100.1 Wheat cytosol, golgi, mitochondrion 6.34 22.81
TraesCS1D01G345100.2 Wheat mitochondrion, plasma membrane, plastid 22.81 22.38
TraesCS4D01G332100.1 Wheat cytosol 6.44 21.33
TraesCS5D01G377300.1 Wheat cytosol, peroxisome, plastid 7.81 18.73
Protein Annotations
MapMan:24.1.3.2.1Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABCAInterPro:ABC_transporter-likeInterPro:ABC_transporter_CS
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0016887GO:GO:0042626GO:GO:0055085InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005
ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19229PANTHER:PTHR19229:SF141SMART:SM00382SUPFAM:SSF52540
TMHMM:TMhelixEnsemblPlantsGene:TraesCS1D01G345300EnsemblPlants:TraesCS1D01G345300.1TIGR:cd03263SEG:seg:
Description
No Description!
Coordinates
chr1D:+:433371313..433376321
Molecular Weight (calculated)
105658.0 Da
IEP (calculated)
9.733
GRAVY (calculated)
0.069
Length
947 amino acids
Sequence
(BLAST)
001: MVSATGGRNG NRTRTRGRGR ALARFCRQHH ALLLKNLAFQ RRNWKTNAAI AAFPVLLCAL LVAIQAVVDR ELDRPPFRCG CEGGHCGIQH STPIQAMSCE
101: VPAPPRWPAL VQVPVVPAFV HGRPARCSNA SCAAPVSVLL TGLNRGLSQS LGRGLFPDLS PSDYFLMPKT MNSSSSLDHL SRVVPGSRTL PAHELFVEPG
201: LVPNETLYVI QSKCSWQKRN VSGNSDGGMP LQLDMECVQG LPLWCASSSV INRRLFNGYK RANKRRRSNE FLAGYDFLDT SKGLFHVYIL YNSSFSRDNG
301: HHSMTVLRVA RLVNMASTAY LKQVLPGVNA EMRLEFLKEM PKAAIKMKLD LTTLLDALFF TWTVQLLLPV ILTYLVYEKQ QNLRLMMKMH GLKDGPYWLI
401: SYSYFLSLSG AYVTFFAVFG SLIGLDIFRL NSYVIQFLFF FIYINLQIVL AFLLASFFSS VKTASVISYI YVFGSGLLGE ALLKLFIEDT TFPRPWLVIM
501: ELVPGFSLYR GVYELSEYAA AGSYMGKPGM QWGDLNDPIN GMKDVLILTS IEWILLLLVA YFLDHRPAWH PIFLFGILST KHSSPSYRAN PRSRRVFADM
601: AKDDVFLEHK VVKRLLKEMD TRNMIICHNL KKVYRGNNRN PDKLAVRGLS LALHKGQCFG MLGPNGAGKS SFINMMIGLV APTCGTAYIH GMDLRKDMNE
701: IYANIGVCPQ HDLLWETLTG REHLQFYGRM KNLSGAALVK AVEESLKSVN LFHCGFGDKS VSKYSGGMKR RLSVAIALIG NPKVVYMDEP STGLDTISRN
801: DLWNVIKRAK KECTIILTTH SMEEAEELCD RVGIFVSGNF QCLGTPKELK TRYGGTRVLT ITTAAEHEEV VARLIAGLSP SAVKIYGMSG TQKFELPKRE
901: VRLDVVFGAV EAARAMFPVH GWGVADTTLE DVFIRVAKDA RAFDVLS
Best Arabidopsis Sequence Match ( AT3G47740.1 )
(BLAST)
001: MADSGPASFW TRANAILRKN LTYQKRNIWS NVRLIMIPFY LCIVLVFIQA LFDSQVNNSL DNQCGCQCID KLGDGKCQMT CGLEYSTRDQ GFFCAIPKPQ
101: PWPPLILIPR PEYRALDANF TNDSCRRKNS CPVTILFTGN NHSLGAVLSR NLLRRPFAMN SSDLLFSLAN NVLATTFKGS ATNYLDAGIV SDGSIYNIQP
201: RCPPNSNFSI SIGQSPLNFT KDMRCVQGLN LWRNNSIEVN LELFEGYHKG NSDGMINEIV AAYDLFDTNM TNFNVNIWFN ATYKDEARNQ PYKVVRVPRL
301: VNWVSNAYLQ YLQGPRTKML FEFVKEMPKP ETKLRLDIAS LIGPIFFTWV ILLLLPVILN SLVYEKQQRL RIIMKMHGLG DGPYWIISYA YFLALSTFYI
401: IFLMIFGSVI GLKFFLLNDF SLQFSFYFVY INLQISIAFL LSSAFSKVET ASVAAYLYVF GSGLLGMFLF QFLLEGLSFP RRWIFVMELY PGFSLYRGLY
501: EFSQNAYQGN LNGKDGMKWK YFSDNAIDEV FYIIIVEWFV ALIATYYIDK MSSSGKDLLF FLKNQNPFKI SHSLQKQVSA ISVEMEKLDV IHESEKVAQL
601: MLESSTSHAI VCDKLRKVYP GRDGNPPKKA VRVLSLAVPS GECFGMLGPN GAGKTSFINM MTGLVKPTSG AAFVQGLDIC KDMDRVYTSM GVCPQHDLLW
701: ETLTGREHLL FYGRLKNLKG VDLNQAVEES LRSVNLFHGG VADKPAGKYS GGMKRRLSVA ISLIGNPKVV YMDEPSTGLD PASRKNLWTV IKNAKRHTAI
801: ILTTHSMEEA EFLCDRLGIF VDGRLQCIGN PKELKGRYGG SYVLTMTTSS EHEKDVEMLV QEVSPNVKKI YHIAGTQKFE IPKDEVRISE VFQVVEKAKS
901: NFKVFAWGLA DTTLEDVFIK VARTAQAFNV FS
Arabidopsis Description
ABCA3ABC transporter A family member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEH6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.