Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, golgi, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- golgi 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS7B01G327900.1 | Wheat | cytosol, golgi, mitochondrion | 96.58 | 97.69 |
TraesCS7A01G427700.1 | Wheat | cytosol | 96.2 | 97.31 |
Zm00001d014611_P001 | Maize | cytosol, mitochondrion, plasma membrane | 65.4 | 91.49 |
EER90300 | Sorghum | cytosol, endoplasmic reticulum, mitochondrion | 89.35 | 87.69 |
HORVU7Hr1G098490.2 | Barley | plastid | 95.06 | 85.62 |
TraesCS4D01G332100.1 | Wheat | cytosol | 86.69 | 79.72 |
Solyc06g068600.2.1 | Tomato | cytosol | 49.81 | 70.81 |
Os06t0695800-01 | Rice | unclear | 87.45 | 66.47 |
CDY01873 | Canola | cytosol | 66.54 | 66.29 |
AT1G67940.1 | Thale cress | cytosol | 65.78 | 65.78 |
Bra004271.1-P | Field mustard | cytosol | 65.78 | 65.53 |
CDX96058 | Canola | cytosol | 65.78 | 65.53 |
VIT_11s0052g00540.t01 | Wine grape | cytosol | 66.54 | 65.3 |
Os10t0434900-00 | Rice | cytosol, mitochondrion | 33.08 | 64.93 |
KRH41857 | Soybean | plasma membrane | 63.88 | 64.62 |
Solyc03g117810.2.1 | Tomato | cytosol | 64.26 | 64.26 |
PGSC0003DMT400036875 | Potato | cytosol | 63.88 | 63.88 |
GSMUA_Achr7P19550_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 74.14 | 62.9 |
PGSC0003DMT400074438 | Potato | extracellular | 65.78 | 61.79 |
TraesCS3D01G393600.2 | Wheat | plastid | 25.86 | 24.64 |
TraesCS5D01G377300.1 | Wheat | cytosol, peroxisome, plastid | 27.38 | 18.23 |
TraesCS6D01G170100.1 | Wheat | plastid | 23.57 | 6.63 |
TraesCS5D01G195700.1 | Wheat | plasma membrane | 22.81 | 6.34 |
TraesCS1D01G345300.1 | Wheat | mitochondrion, plasma membrane | 22.81 | 6.34 |
TraesCS1D01G345200.1 | Wheat | plasma membrane | 22.43 | 6.2 |
TraesCS3D01G368700.2 | Wheat | plasma membrane | 21.29 | 5.79 |
TraesCS7D01G355100.1 | Wheat | plastid | 20.53 | 5.65 |
TraesCS1D01G345100.2 | Wheat | mitochondrion, plasma membrane, plastid | 20.53 | 5.6 |
Protein Annotations
Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:AAA+_ATPase | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005315 | GO:GO:0005488 | GO:GO:0005524 |
GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016887 |
GO:GO:0035435 | InterPro:IPR003439 | InterPro:P-loop_NTPase | PFAM:PF00005 | ScanProsite:PS00211 | PFscan:PS50893 |
PANTHER:PTHR43423 | PANTHER:PTHR43423:SF1 | InterPro:Phosp_transpt1 | SMART:SM00382 | SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS7D01G420100 |
EnsemblPlants:TraesCS7D01G420100.1 | TIGR:cd03260 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr7D:+:539760996..539764884
Molecular Weight (calculated)
27839.7 Da
IEP (calculated)
5.817
GRAVY (calculated)
0.036
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSASDDSRE HLLDVGALAA DGAAGPKIRV RGLRRRSEAS GEEILRGVDL DVPRGVVMGV IGPSGSGKST LLRALNRLWE PAPGAVTLDG ADICGMDVLA
101: LRRKVGMLFQ LPAMFDGSVG DNVRYGPQLR GKKLSEAEVK SLLSLSDLDP ALSSRPASEL SVGQAQRVAL ARTLANDPEV LLLDEPTSAL DPISTQNIEE
201: AIVRLKTARG LTTVIVSHSV KQIQRIADLV CLVVDGEVVE VLAPSALSEA KHPMARRFLE LSS
101: LRRKVGMLFQ LPAMFDGSVG DNVRYGPQLR GKKLSEAEVK SLLSLSDLDP ALSSRPASEL SVGQAQRVAL ARTLANDPEV LLLDEPTSAL DPISTQNIEE
201: AIVRLKTARG LTTVIVSHSV KQIQRIADLV CLVVDGEVVE VLAPSALSEA KHPMARRFLE LSS
001: MPSLWSNESD GSLREHLVDV VVSGSEPKIR VHDLTRVADD GSRILKGVTI DIPKGMIVGV IGPSGSGKST FLRSLNRLWE PPESTVFLDG EDITNVDVIA
101: LRRRVGMLFQ LPVLFQGTVA DNVRYGPNLR GEKLSDEEVY KLLSLADLDA SFAKKTGAEL SVGQAQRVAL ARTLANEPEV LLLDEPTSAL DPISTENIED
201: VIVKLKKQRG ITTVIVSHSI KQIQKVADIV CLVVDGEIVE VLKPSELSHA THPMAQRFLQ LSS
101: LRRRVGMLFQ LPVLFQGTVA DNVRYGPNLR GEKLSDEEVY KLLSLADLDA SFAKKTGAEL SVGQAQRVAL ARTLANEPEV LLLDEPTSAL DPISTENIED
201: VIVKLKKQRG ITTVIVSHSI KQIQKVADIV CLVVDGEIVE VLKPSELSHA THPMAQRFLQ LSS
Arabidopsis Description
ABCI17Sensitive to aluminum rhizotoxicity 1 [Source:UniProtKB/TrEMBL;Acc:D6RVY5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.