Factsheet for Bra004271.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96058	Canola	cytosol	99.62	99.62
CDY01873	Canola	cytosol	97.73	97.73
AT1G67940.1	Thale cress	cytosol	89.02	89.35
Solyc06g068600.2.1	Tomato	cytosol	55.68	79.46
Zm00001d014611_P001	Maize	cytosol, mitochondrion, plasma membrane	51.14	71.81
VIT_11s0052g00540.t01	Wine grape	cytosol	71.97	70.9
Solyc03g117810.2.1	Tomato	cytosol	70.45	70.72
KRH41857	Soybean	plasma membrane	69.32	70.38
PGSC0003DMT400036875	Potato	cytosol	69.32	69.58
PGSC0003DMT400074438	Potato	extracellular	71.59	67.5
EER90300	Sorghum	cytosol, endoplasmic reticulum, mitochondrion	68.18	67.16
TraesCS7A01G427700.1	Wheat	cytosol	65.91	66.92
TraesCS7B01G327900.1	Wheat	cytosol, golgi, mitochondrion	65.91	66.92
TraesCS4A01G414400.1	Wheat	cytosol	65.91	66.16
TraesCS7D01G420100.1	Wheat	cytosol, golgi, mitochondrion	65.53	65.78
TraesCS4B01G315100.1	Wheat	cytosol	65.15	65.4
TraesCS4B01G336400.1	Wheat	cytosol, plastid	66.29	61.62
TraesCS4D01G332100.1	Wheat	cytosol	65.91	60.84
HORVU7Hr1G098490.2	Barley	plastid	65.15	58.9
HORVU4Hr1G079940.5	Barley	cytosol	66.67	56.41
GSMUA_Achr7P19550_001	Banana	endoplasmic reticulum, extracellular, vacuole	65.15	55.48
Os06t0695800-01	Rice	unclear	67.42	51.45
Os10t0434900-00	Rice	cytosol, mitochondrion	22.73	44.78
Bra022481.1-P	Field mustard	plastid	29.92	24.01
Bra008779.1-P	Field mustard	plastid	24.62	23.72
Bra018114.1-P	Field mustard	cytosol, peroxisome, plasma membrane	22.73	9.54
Bra033786.1-P	Field mustard	cytosol, mitochondrion, nucleus	8.71	7.72
Bra018115.1-P	Field mustard	plasma membrane	25.0	7.13
Bra015049.1-P	Field mustard	plasma membrane	23.86	7.05
Bra033785.1-P	Field mustard	plasma membrane	25.0	7.01
Bra018113.1-P	Field mustard	plasma membrane	24.62	6.9
Bra019513.1-P	Field mustard	plasma membrane	22.73	6.72
Bra012931.1-P	Field mustard	cytosol, peroxisome, plasma membrane	14.77	6.59
Bra012927.1-P	Field mustard	cytosol	14.77	6.34
Bra012928.1-P	Field mustard	plasma membrane	20.83	5.93
Bra018116.1-P	Field mustard	golgi, mitochondrion	21.21	5.68
Bra012930.1-P	Field mustard	plasma membrane	12.5	3.63
Bra000236.1-P	Field mustard	mitochondrion	23.11	3.31
Bra038152.1-P	Field mustard	plasma membrane, vacuole	2.27	1.46

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EnsemblPlantsGene:Bra004271
EnsemblPlants:Bra004271.1	EnsemblPlants:Bra004271.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005315	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	GO:GO:0035435	InterPro:IPR003439	UniProt:M4CJ87
InterPro:P-loop_NTPase	PFAM:PF00005	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR43423	PANTHER:PTHR43423:SF1
InterPro:Phosp_transpt1	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI00025416D2	:	:

Description

AT1G67940 (E=2e-127) ATNAP3 | ATNAP3; transporter

Coordinates

chrA07:-:17732476..17733781

Molecular Weight (calculated)

28834.1 Da

IEP (calculated)

5.030

GRAVY (calculated)

0.038

Length

264 amino acids

Sequence
(BLAST)

001: MPLLVSGESD GVLREHLLDV EALSGQEPKI RVRDLTRVSD DGSLILKGVS MDIPKGMIVG VIGPSGSGKS TFLRSLNRLW EPPATTVFLD GVDITNIDVI
101: TLRRRVGMLF QLPVLFEGTV ADNVRYGPNL RGEKLSDQDV YKLLTFADLD ASFAKKTGSE LSVGQAQRVA LARTLANEPE VLLLDEPTSA LDPISTENIE
201: DVIVKLKKQR GITTVIVSHS IKQIQRVADI VCLVVDGEIV EVLKPDELSQ ATHPMARRFL QLSS

Best Arabidopsis Sequence Match ( AT1G67940.1 )
(BLAST)

001: MPSLWSNESD GSLREHLVDV VVSGSEPKIR VHDLTRVADD GSRILKGVTI DIPKGMIVGV IGPSGSGKST FLRSLNRLWE PPESTVFLDG EDITNVDVIA
101: LRRRVGMLFQ LPVLFQGTVA DNVRYGPNLR GEKLSDEEVY KLLSLADLDA SFAKKTGAEL SVGQAQRVAL ARTLANEPEV LLLDEPTSAL DPISTENIED
201: VIVKLKKQRG ITTVIVSHSI KQIQKVADIV CLVVDGEIVE VLKPSELSHA THPMAQRFLQ LSS

Arabidopsis Description

ABCI17Sensitive to aluminum rhizotoxicity 1 [Source:UniProtKB/TrEMBL;Acc:D6RVY5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.