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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • plasma membrane 5
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX83025 Canola plasma membrane 99.58 99.58
Bra018113.1-P Field mustard plasma membrane 86.52 86.52
AT3G47780.1 Thale cress plasma membrane 83.97 84.6
Bra018114.1-P Field mustard cytosol, peroxisome, plasma membrane 52.34 78.38
Bra015049.1-P Field mustard plasma membrane 70.7 74.58
Bra018115.1-P Field mustard plasma membrane 73.04 74.3
KRH54520 Soybean plasma membrane, plastid 58.07 67.78
Bra012931.1-P Field mustard cytosol, peroxisome, plasma membrane 42.25 67.23
Solyc03g113040.2.1 Tomato plastid 65.92 65.71
Bra033786.1-P Field mustard cytosol, mitochondrion, nucleus 20.7 65.44
Bra019513.1-P Field mustard plasma membrane 61.89 65.29
Solyc03g113060.2.1 Tomato extracellular 64.33 64.19
Bra012927.1-P Field mustard cytosol 41.83 64.06
KRH63384 Soybean plasma membrane 49.36 63.87
KRG88422 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 32.8 62.93
KRH56933 Soybean plasma membrane, plastid 62.63 62.17
Solyc06g070920.2.1 Tomato extracellular, plasma membrane 41.93 61.91
KRH03450 Soybean plasma membrane, plastid 62.0 61.22
TraesCS7A01G367700.1 Wheat plasma membrane 36.09 59.86
KXG25097 Sorghum plasma membrane 60.19 59.19
Os08t0398300-01 Rice plasma membrane 59.77 58.83
TraesCS1D01G345200.1 Wheat plasma membrane 59.24 58.61
TraesCS1A01G343000.1 Wheat plasma membrane 59.02 58.34
TraesCS1B01G356200.1 Wheat plasma membrane 58.6 57.98
HORVU1Hr1G075620.5 Barley plasma membrane 58.49 57.76
HORVU4Hr1G087670.8 Barley mitochondrion 58.17 57.08
Zm00001d050259_P002 Maize plasma membrane 59.45 56.91
TraesCS4B01G365000.1 Wheat plasma membrane 58.92 56.4
TraesCSU01G138200.1 Wheat plasma membrane 58.7 55.41
OQU89360 Sorghum plasma membrane 55.2 54.85
TraesCS3D01G368700.2 Wheat plasma membrane 56.26 54.75
TraesCS5A01G534100.3 Wheat cytosol 58.6 54.65
TraesCS5A01G193200.1 Wheat plasma membrane 54.88 54.65
TraesCS5D01G195700.1 Wheat plasma membrane 54.67 54.44
Zm00001d020208_P003 Maize plasma membrane 54.25 53.9
Solyc06g070950.1.1 Tomato plasma membrane 50.85 53.76
Os06t0589300-01 Rice plasma membrane 53.82 53.42
EER89983 Sorghum plastid 53.61 52.94
TraesCS7D01G355100.1 Wheat plastid 53.61 52.88
TraesCS5B01G188600.1 Wheat plasma membrane 53.29 52.84
HORVU5Hr1G056930.20 Barley plasma membrane 54.67 52.71
Zm00001d036927_P001 Maize plasma membrane, plastid 53.82 52.54
TraesCS7B01G260800.1 Wheat plastid 53.18 52.41
VIT_07s0095g00600.t01 Wine grape extracellular 3.82 52.17
HORVU7Hr1G085680.2 Barley endoplasmic reticulum, peroxisome, plastid 53.5 50.86
GSMUA_Achr7P23890_001 Banana plasma membrane 61.57 49.57
GSMUA_Achr3P20510_001 Banana plasma membrane 60.08 48.25
HORVU3Hr1G030470.1 Barley cytosol, extracellular, plasma membrane 7.43 41.67
HORVU6Hr1G043820.1 Barley cytosol, endoplasmic reticulum, plasma membrane 7.43 41.67
Solyc06g070930.2.1 Tomato plastid 11.78 40.51
HORVU4Hr1G039510.1 Barley cytosol 7.22 40.48
Bra004271.1-P Field mustard cytosol 7.01 25.0
Bra008779.1-P Field mustard plastid 6.9 23.72
Bra022481.1-P Field mustard plastid 8.28 23.71
Bra012928.1-P Field mustard plasma membrane 23.25 23.62
Bra018116.1-P Field mustard golgi, mitochondrion 24.2 23.12
Bra012930.1-P Field mustard plasma membrane 19.96 20.7
Bra038152.1-P Field mustard plasma membrane, vacuole 7.75 17.8
Bra000236.1-P Field mustard mitochondrion 20.49 10.48
Protein Annotations
MapMan:24.1.3.2.1Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABCAInterPro:ABC_transporter-likeInterPro:ABC_transporter_CS
EnsemblPlantsGene:Bra033785EnsemblPlants:Bra033785.1EnsemblPlants:Bra033785.1-PGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085
InterPro:IPR003439UniProt:M4EY93InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF12698ScanProsite:PS00211
PFscan:PS50893PANTHER:PTHR19229PANTHER:PTHR19229:SF141SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelix
UniParc:UPI0002543D62SEG:seg::::
Description
AT3G47780 (E=0.0) ATATH6, ATH6 | ATATH6; ATPase, coupled to transmembrane movement of substances / transporter
Coordinates
chrA01:+:14251184..14255768
Molecular Weight (calculated)
105643.0 Da
IEP (calculated)
8.616
GRAVY (calculated)
0.010
Length
942 amino acids
Sequence
(BLAST)
001: MADPGTASFL TRANALLRKN LTYQKRNIWS NVRLIMIPFL LCLMLVALQI VFDTVVNNAD NNRCGCQCIV TNQNGNCLNE TCGIEFSSSD QAFFCPISSP
101: PRWPPLLQVP RPESRAVNTT FLPYMGLPDE TCRRTRTCPV TILFTGNNRS LGTSLFGNLL PSSVTVNISD PLQGLAYNVL GTEAESELTN YLDPGIASNL
201: SIYNIQSGCI SNAAFPFSFE EETLKFKKEL RCAQGLNLWR NNSRQVNDVI FKGYRKGNPE GKINEIAAAY DLLNTDRNNF NVHIWYNSTY RNGTNDRPST
301: LLRVPGLVNL VSNAYLHFLQ GPGTKMLFEY VKEVPKLERK LRLDIASLIG PLFFTWVILL LFPVILSSLV YEKQERLRII MKMHGLGDGP YWMISYAYFL
401: SISMLYFIAL MIFGSAIGLK FFRINDYSIQ FTFYFLYVNL QIALCFLVSS IFSKVKTSTV SSYIYVFLSG LVGSFLLQFL IEDSSFPRGW IIVLELYPAF
501: SLFRGLYEFS QFSFRGNLRG ADGMKWKDFG DSAMDEVFII IIVEWFLALI AAYYIDKIVS SGKDPLFFLT NPFQKSPSMR RPSLQRQGSK VVVEMEKPDV
601: TQEIEKVEKL MLEPSTSHAI VCENLKKVYP GRDGNPPKLA VRGLSLAVPS GECFGMLGPN GAGKTSFINM MTGLLKPTSG TGLVRGLDIC NDMDRVYTSM
701: GVCPQHDLLW ETLTGREHLL FYGRLKNLKG SELIQAVEES LKSVNLFHGG VADKPAGKYS GGMKRRLSVA ISLIGNPKVV YMDEPSTGLD PASRKNLWTV
801: IKRAKQNTAI ILTTHSMEEA EFLCDRLGIF VDGSLQCIGN PKELKGRYGG SYVFTMTTSS EHEGNVERLI QDVSPNAKKI YHIAGTQKFE LPKEEVRISE
901: VFQAVEKAKS NFTVFAWGLA DTTLEDVFIK VARTGQAFNV FS
Best Arabidopsis Sequence Match ( AT3G47780.1 )
(BLAST)
001: MADPGPASFS TRANALLRKN LTYQKRNLWS NIRLIMIPFY LCILLVIIQI LFDTQVNNSA DNRCGCECIE RNRAGKCQRE LCGLEHSKPD QAFFCSIPRP
101: PLWPPLLQIP RPESRDVRGL RDDSCRRTGS CPVTILFTGN NRSLGTTVSE NLFTSSVSAN ASEILRTLAN NVLGTTVEAD FTNYLDPGIA SNLSIYNIQP
201: RCILNATFPF SFEQPPLKFE KELRCVQGSN LWTNTSKEVN DKIFKGYKKG NPEGKINEIA AAYDLLNTDR NNFNVHIWYN STYKDDAGNR LIKLIRVPRS
301: VNLVSNAYLQ FLQGPGTRML FEYVKEMPKP ETSLRLDIAS LIGPLFFTWV ILLLFPVILS SLVYEKQQHL RIIMKMHGLG DGPYWMISYA YFLTISVLYV
401: ICLMIFGSAI GLKFFRLNSY SIQFVFYFLY LNLQIALAFL VSSVFSKVKT STVASYIYVF GSGLLGLFLL NFLIEDSSFP RGWIIVMELY PGFSLYRGLY
501: ELAQFAFRGN LRGEDGMKWK DFGDSAMDDV FYIIVVEWFL ALIAAYYIDK ISSSGRNPLF FLQNPFKKSP SLRRPSLQRQ GSKVSVDMEK PDVTHESKKV
601: ERLMLESSTS HAIVCDNLKK VYPGRDGNPP KLAVRGLSLA VPSGECFGML GPNGAGKTSF INMMTGLLKP TSGTALVQGL DICNDMDRVY TSMGVCPQHD
701: LLWETLTGRE HLLFYGRLKN LKGADLNQAV EESLKSVNLF HGGVADKPAG KYSGGMKRRL SVAISLIGNP KVVYMDEPST GLDPASRKNL WTVIKRAKQN
801: TAIILTTHSM EEAEFLCDRL GIFVDGGLQC IGNPKELKGR YGGSYVFTMT TSSEHEQNVE KLIKDVSPNA KKIYHIAGTQ KFELPKEEVR ISEVFQAVEK
901: AKSNFTVFAW GLADTTLEDV FIKVVRNGQA FNVFS
Arabidopsis Description
ABCA7ABC transporter A family member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.