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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • golgi 1
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, mitochondrion, plasma membrane, plastid
iPSORT:plastid
MultiLoc:golgi
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G195700.1 Wheat plasma membrane 92.43 95.45
TraesCS5A01G193200.1 Wheat plasma membrane 91.1 94.08
TraesCS5B01G188600.1 Wheat plasma membrane 91.1 93.68
OQU89360 Sorghum plasma membrane 75.54 77.85
Zm00001d020208_P003 Maize plasma membrane 75.33 77.64
HORVU1Hr1G075620.5 Barley plasma membrane 69.29 70.96
CDX94927 Canola cytosol 8.29 68.07
HORVU4Hr1G087670.8 Barley mitochondrion 66.22 67.4
VIT_17s0000g05860.t01 Wine grape plasma membrane, plastid 61.0 62.8
KRH54520 Soybean plasma membrane, plastid 51.48 62.33
PGSC0003DMT400083070 Potato cytosol 7.88 62.1
Solyc03g113040.2.1 Tomato plastid 59.57 61.59
VIT_12s0055g00730.t01 Wine grape extracellular 7.78 59.84
KRG88422 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 29.99 59.67
CDY02120 Canola cytosol, nucleus, plasma membrane 40.12 59.48
Solyc06g070920.2.1 Tomato extracellular, plasma membrane 38.59 59.09
KRH63384 Soybean plasma membrane 44.01 59.07
Solyc03g113060.2.1 Tomato extracellular 56.91 58.9
CDY31786 Canola cytosol, nucleus, plasma membrane 39.71 58.79
Bra018114.1-P Field mustard cytosol, peroxisome, plasma membrane 37.15 57.71
KRH56933 Soybean plasma membrane, plastid 55.68 57.32
AT3G47790.1 Thale cress plasma membrane 52.51 56.94
AT3G47780.1 Thale cress plasma membrane 53.94 56.36
KRH03450 Soybean plasma membrane, plastid 54.66 55.97
CDY24156 Canola plasma membrane 53.84 55.84
Bra019513.1-P Field mustard plasma membrane 50.87 55.66
CDY36930 Canola plasma membrane 53.43 55.41
Bra018113.1-P Field mustard plasma membrane 53.33 55.31
CDY36932 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 50.15 55.3
HORVU1Hr1G075610.7 Barley extracellular, mitochondrion, plasma membrane 52.2 55.25
CDX68441 Canola plasma membrane 53.22 55.2
VIT_07s0095g00600.t01 Wine grape extracellular 3.89 55.07
CDY21797 Canola plasma membrane 50.77 54.87
CDX83025 Canola plasma membrane 52.81 54.78
CDX77874 Canola plasma membrane 46.47 54.76
CDY23043 Canola cytosol, mitochondrion 28.66 54.69
Bra033785.1-P Field mustard plasma membrane 52.71 54.67
CDY24158 Canola plasma membrane 51.79 54.64
Bra018115.1-P Field mustard plasma membrane 51.18 54.0
Solyc06g070950.1.1 Tomato plasma membrane 48.82 53.54
GSMUA_Achr7P23890_001 Banana plasma membrane 63.97 53.42
AT5G61740.1 Thale cress plasma membrane 49.54 53.25
CDX68440 Canola cytosol, mitochondrion 7.57 53.24
AT5G61700.1 Thale cress plasma membrane 49.95 53.22
AT3G47770.2 Thale cress endoplasmic reticulum, golgi, plasma membrane, plastid 50.36 53.13
AT3G47760.3 Thale cress plasma membrane 50.87 53.1
CDY39546 Canola plasma membrane 50.77 53.05
CDX77421 Canola plasma membrane 50.67 52.94
AT3G47750.1 Thale cress mitochondrion, plasma membrane 50.56 52.72
CDY62599 Canola plasma membrane 46.78 52.59
AT3G47740.1 Thale cress plasma membrane 50.15 52.58
PGSC0003DMT400083071 Potato plasma membrane 50.26 52.51
Bra015049.1-P Field mustard plasma membrane 47.9 52.41
CDY02114 Canola plasma membrane 47.49 52.31
CDY36931 Canola plastid 49.33 51.77
CDY23039 Canola plasma membrane 46.98 51.69
HORVU7Hr1G085680.2 Barley endoplasmic reticulum, peroxisome, plastid 52.3 51.56
Bra012931.1-P Field mustard cytosol, peroxisome, plasma membrane 31.01 51.18
CDY24157 Canola plastid 49.74 51.1
CDY23798 Canola nucleus, peroxisome, plasma membrane 19.75 50.26
Bra012927.1-P Field mustard cytosol 31.01 49.27
GSMUA_Achr3P20510_001 Banana plasma membrane 58.85 49.02
HORVU6Hr1G038520.24 Barley endoplasmic reticulum, plasma membrane 46.37 48.24
Bra033786.1-P Field mustard cytosol, mitochondrion, nucleus 14.43 47.32
VIT_18s0041g02240.t01 Wine grape plasma membrane 34.9 46.33
CDX68438 Canola endoplasmic reticulum, extracellular, plasma membrane 19.96 45.77
CDX68439 Canola nucleus 6.76 41.77
HORVU3Hr1G030470.1 Barley cytosol, extracellular, plasma membrane 7.06 41.07
HORVU6Hr1G043820.1 Barley cytosol, endoplasmic reticulum, plasma membrane 6.86 39.88
HORVU4Hr1G039510.1 Barley cytosol 6.65 38.69
Solyc06g070930.2.1 Tomato plastid 10.64 37.96
HORVU3Hr1G089880.8 Barley plastid 6.96 25.0
HORVU1Hr1G075640.9 Barley golgi 22.11 22.06
HORVU7Hr1G098490.2 Barley plastid 6.35 21.23
HORVU4Hr1G079940.5 Barley cytosol 6.04 18.91
HORVU4Hr1G025760.12 Barley cytosol 3.28 18.6
HORVU5Hr1G091750.1 Barley plastid 6.76 17.05
Protein Annotations
MapMan:24.1.3.2.1UniProt:A0A287RBN9InterPro:AAA+_ATPaseInterPro:ABCAInterPro:ABC_transporter-likeInterPro:ABC_transporter_CS
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0016887GO:GO:0042626GO:GO:0055085EnsemblPlantsGene:HORVU5Hr1G056930EnsemblPlants:HORVU5Hr1G056930.20InterPro:IPR003439
InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF12698ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19229
PANTHER:PTHR19229:SF141SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI000B471CF4SEG:seg
Description
No Description!
Coordinates
chrchr5H:-:446226752..446233410
Molecular Weight (calculated)
109288.0 Da
IEP (calculated)
8.025
GRAVY (calculated)
0.137
Length
977 amino acids
Sequence
(BLAST)
001: MDSRRRPASF LTQANALLRK NLCLQKRNLK TNIGITIFPI LICVLLLVLQ NIINNELDKP KYNCGCACVD TDMYGTCKKR ECGVQYSTLE QVWSCAIPSP
101: PRWPALIQVP QPQFRAVRTV SQPFDGLPYP SCRDSLSCPA TVLITGKDRG FAESIAGGLF PVFSPTLNVT DYLDALSRIV VGSDTIPWYT QLVEPAFSSS
201: DTLYLLQPQC VPYLSQTISY NARGIPLELN IQCVEGVLLW RESTSIINDE LSKGYVQSRG KTNEFIAGYD FLNSTEYGLD INVWYNSTYS GKTAFSFIAA
301: LRVPRLVNAV SNAYLKHIRG PGVEVLLEYV KDMPKVGTSY RFDLSSLISP LFFTWIVELL FPVMLTYLVY EKQQRLKIMM KMQGLKDGPY WMISYGYFFV
401: LSVVYMTFFV IFGSLIGLNF FRVNNYGIQI VFFFVYINLQ IAFAFFVASF FSSVKIASVI GYIYVFGSGL LGAFLFRFFI EDITFSRGWI LFMEIVPGFS
501: LYRGLYELGQ YAFSGNAMGA TGMMWESLKE PINGMRDILI IMTVEWALML VLAFYLDQVS SIGGSVGNPL LLFRCLQKKH APPLQSSSVQ QNHKVAVDME
601: KADVAQERQV VEQLLMDCNA NQAIICDNLR KVYPGRDGNP DKLAVRGLSL ALPKGQCFGM LGPNGAGKTS FISMMVGLTK PTSGTAYTHG MDIRMDMDDI
701: YTNMGVCPQH EYLLQLIAYL DMSFLCHIRL SSHGNCSCLK CSLLWETLTG KEHLFFYARL KNVKGAALVK AVDDSLKSVN LFHGGVGDKQ VVTYSGGMKR
801: RLSVAISLIG DPKVVYMDEP STGLDPASRN NLWNIVKEAK RNRAIILTTH SMEEAEVLCD RLGIFVDGEF QCLGNPKELK ARYGGAYIFT VTTPPEQESE
901: IEQLVHHLSP SANKIYNLSG TQKFELPKQE VRIAGVFHAV ERAKSRLSIH AWGLVDTTLE DVFIKVANGA PVFNDVA
Best Arabidopsis Sequence Match ( AT3G47740.1 )
(BLAST)
001: MADSGPASFW TRANAILRKN LTYQKRNIWS NVRLIMIPFY LCIVLVFIQA LFDSQVNNSL DNQCGCQCID KLGDGKCQMT CGLEYSTRDQ GFFCAIPKPQ
101: PWPPLILIPR PEYRALDANF TNDSCRRKNS CPVTILFTGN NHSLGAVLSR NLLRRPFAMN SSDLLFSLAN NVLATTFKGS ATNYLDAGIV SDGSIYNIQP
201: RCPPNSNFSI SIGQSPLNFT KDMRCVQGLN LWRNNSIEVN LELFEGYHKG NSDGMINEIV AAYDLFDTNM TNFNVNIWFN ATYKDEARNQ PYKVVRVPRL
301: VNWVSNAYLQ YLQGPRTKML FEFVKEMPKP ETKLRLDIAS LIGPIFFTWV ILLLLPVILN SLVYEKQQRL RIIMKMHGLG DGPYWIISYA YFLALSTFYI
401: IFLMIFGSVI GLKFFLLNDF SLQFSFYFVY INLQISIAFL LSSAFSKVET ASVAAYLYVF GSGLLGMFLF QFLLEGLSFP RRWIFVMELY PGFSLYRGLY
501: EFSQNAYQGN LNGKDGMKWK YFSDNAIDEV FYIIIVEWFV ALIATYYIDK MSSSGKDLLF FLKNQNPFKI SHSLQKQVSA ISVEMEKLDV IHESEKVAQL
601: MLESSTSHAI VCDKLRKVYP GRDGNPPKKA VRVLSLAVPS GECFGMLGPN GAGKTSFINM MTGLVKPTSG AAFVQGLDIC KDMDRVYTSM GVCPQHDLLW
701: ETLTGREHLL FYGRLKNLKG VDLNQAVEES LRSVNLFHGG VADKPAGKYS GGMKRRLSVA ISLIGNPKVV YMDEPSTGLD PASRKNLWTV IKNAKRHTAI
801: ILTTHSMEEA EFLCDRLGIF VDGRLQCIGN PKELKGRYGG SYVLTMTTSS EHEKDVEMLV QEVSPNVKKI YHIAGTQKFE IPKDEVRISE VFQVVEKAKS
901: NFKVFAWGLA DTTLEDVFIK VARTAQAFNV FS
Arabidopsis Description
ABCA3ABC transporter A family member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEH6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.