Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 2
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG88422 | Soybean | cytosol, mitochondrion, peroxisome, plasma membrane | 35.05 | 52.55 |
| VIT_12s0055g00730.t01 | Wine grape | extracellular | 8.83 | 51.18 |
| Solyc06g070920.2.1 | Tomato | extracellular, plasma membrane | 39.67 | 45.77 |
| KRH54520 | Soybean | plasma membrane, plastid | 50.0 | 45.6 |
| TraesCS7A01G367700.1 | Wheat | plasma membrane | 33.97 | 44.01 |
| VIT_17s0000g05860.t01 | Wine grape | plasma membrane, plastid | 54.76 | 42.47 |
| VIT_07s0095g00600.t01 | Wine grape | extracellular | 3.8 | 40.58 |
| Solyc03g113060.2.1 | Tomato | extracellular | 50.54 | 39.41 |
| HORVU6Hr1G043820.1 | Barley | cytosol, endoplasmic reticulum, plasma membrane | 8.97 | 39.29 |
| KRH56933 | Soybean | plasma membrane, plastid | 50.27 | 38.99 |
| Solyc03g113040.2.1 | Tomato | plastid | 49.86 | 38.84 |
| KRH03450 | Soybean | plasma membrane, plastid | 49.73 | 38.36 |
| HORVU3Hr1G030470.1 | Barley | cytosol, extracellular, plasma membrane | 8.56 | 37.5 |
| HORVU4Hr1G039510.1 | Barley | cytosol | 8.56 | 37.5 |
| Solyc06g070950.1.1 | Tomato | plasma membrane | 45.38 | 37.49 |
| PGSC0003DMT400083071 | Potato | plasma membrane | 47.01 | 37.01 |
| TraesCS1A01G343000.1 | Wheat | plasma membrane | 47.15 | 36.41 |
| TraesCS5D01G195700.1 | Wheat | plasma membrane | 46.74 | 36.36 |
| TraesCS1D01G345200.1 | Wheat | plasma membrane | 47.01 | 36.34 |
| TraesCS1B01G356200.1 | Wheat | plasma membrane | 46.88 | 36.24 |
| HORVU4Hr1G087670.8 | Barley | mitochondrion | 47.01 | 36.04 |
| HORVU1Hr1G075620.5 | Barley | plasma membrane | 46.6 | 35.95 |
| TraesCS5A01G193200.1 | Wheat | plasma membrane | 46.2 | 35.94 |
| OQU89360 | Sorghum | plasma membrane | 46.2 | 35.87 |
| Zm00001d020208_P003 | Maize | plasma membrane | 46.2 | 35.87 |
| TraesCS7D01G355100.1 | Wheat | plastid | 46.47 | 35.81 |
| KXG25097 | Sorghum | plasma membrane | 46.47 | 35.7 |
| TraesCS5B01G188600.1 | Wheat | plasma membrane | 45.92 | 35.58 |
| KRH63384 | Soybean | plasma membrane | 35.19 | 35.58 |
| TraesCS7B01G260800.1 | Wheat | plastid | 46.2 | 35.56 |
| EER89983 | Sorghum | plastid | 45.79 | 35.32 |
| Os08t0398300-01 | Rice | plasma membrane | 45.92 | 35.32 |
| TraesCS4B01G365000.1 | Wheat | plasma membrane | 47.15 | 35.26 |
| Os06t0589300-01 | Rice | plasma membrane | 45.24 | 35.09 |
| HORVU5Hr1G056930.20 | Barley | plasma membrane | 46.33 | 34.9 |
| TraesCSU01G138200.1 | Wheat | plasma membrane | 47.15 | 34.77 |
| Zm00001d036927_P001 | Maize | plasma membrane, plastid | 45.52 | 34.72 |
| Zm00001d050259_P002 | Maize | plasma membrane | 46.33 | 34.65 |
| HORVU7Hr1G085680.2 | Barley | endoplasmic reticulum, peroxisome, plastid | 46.33 | 34.41 |
| TraesCS5A01G534100.3 | Wheat | cytosol | 46.74 | 34.06 |
| TraesCS3D01G368700.2 | Wheat | plasma membrane | 44.43 | 33.78 |
| GSMUA_Achr7P23890_001 | Banana | plasma membrane | 49.32 | 31.03 |
| GSMUA_Achr3P20510_001 | Banana | plasma membrane | 48.91 | 30.69 |
| VIT_14s0068g01730.t01 | Wine grape | plastid | 8.29 | 21.48 |
| VIT_11s0052g00540.t01 | Wine grape | cytosol | 7.34 | 20.15 |
| VIT_04s0023g00290.t01 | Wine grape | plastid | 9.24 | 19.94 |
| VIT_17s0000g05850.t01 | Wine grape | plasma membrane | 24.18 | 18.58 |
| Solyc06g070930.2.1 | Tomato | plastid | 6.66 | 17.88 |
| VIT_08s0007g08730.t01 | Wine grape | mitochondrion, plasma membrane | 19.57 | 7.66 |
Protein Annotations
| MapMan:24.1.3.2.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABCA | InterPro:ABC_transporter-like | ProteinID:CBI39216 |
| ProteinID:CBI39216.3 | UniProt:D7U902 | EMBL:FN596744 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 |
| GO:GO:0016887 | GO:GO:0042626 | GO:GO:0043231 | GO:GO:0055085 | InterPro:IPR003439 | InterPro:P-loop_NTPase |
| PFAM:PF00005 | PFAM:PF12698 | PFscan:PS50893 | PANTHER:PTHR19229 | PANTHER:PTHR19229:SF141 | SMART:SM00382 |
| SUPFAM:SSF52540 | TMHMM:TMhelix | UniParc:UPI0001BE4E31 | ArrayExpress:VIT_18s0041g02240 | EnsemblPlantsGene:VIT_18s0041g02240 | EnsemblPlants:VIT_18s0041g02240.t01 |
Description
No Description!
Coordinates
chr18:+:27367072..27377291
Molecular Weight (calculated)
84028.4 Da
IEP (calculated)
8.067
GRAVY (calculated)
0.030
Length
736 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWFYDVHGG GGRDVNAKLN EVAFAMENTK KGPKQRLHIF IFFILLPSRI FPFIIFNVTN AHQTRRFLFL YVKCNEVRLI LQYIYKLYLC LNVEIRCVRA
101: LCLWRNSSSE VNDELFKGYR EGNLEKKINE FAAAFDFSNS NKTNFNVTIW YNSTHELARL VNLVCIISKL HDLLASNAYL LSLKDGGTKV LLDFMKGMPQ
201: PSSNPPRLDV ASAFGVLSFT WVVMQFFPMV LTSLVQEKES NLRIMMKIHG LDDRLYWVIS YTYFVLEFVI YMLCLVAFAS VLGLQFFTMN DFKIQFLFYF
301: IGINLQISMA FLMAPILSNV KMITVITFAL LFGSRLSGKS VFEFFLEDTT LSRHWIIVME LYPAFSLYRG IYELAQYSLM GSATGTQGMQ WRDLSDPENG
401: MRDVCIIMMV EWLVVLFIAY DIDQQRISSR NGSNLKSQKF SAVSPQVENI DVFEEREKVE RWLHKPTSIY SIICHNLEKV YPERDGNPKK IGVRGLSLAI
501: SKGECFGIVG DSDAGKTSFI SMMTGITKPT SGKAFIEGLD IESQIKEIYT RIGYCPQIDL LWETLTGREH LQFYGRVKNL VGPALTQAVE NSLRRVNLVR
601: GGVGDKEVSE YSRSEKRRLS VAISLIGNPQ VVFMEEPTVG LDPVLRTSLW NAIKHAKQDR TIILTTQSME EAEALCDRIG VLADGCLQCI ASPRELKARF
701: ERFEESSTFK DTTPPCQKDE LRRLFGLPTS SGSVEK
101: LCLWRNSSSE VNDELFKGYR EGNLEKKINE FAAAFDFSNS NKTNFNVTIW YNSTHELARL VNLVCIISKL HDLLASNAYL LSLKDGGTKV LLDFMKGMPQ
201: PSSNPPRLDV ASAFGVLSFT WVVMQFFPMV LTSLVQEKES NLRIMMKIHG LDDRLYWVIS YTYFVLEFVI YMLCLVAFAS VLGLQFFTMN DFKIQFLFYF
301: IGINLQISMA FLMAPILSNV KMITVITFAL LFGSRLSGKS VFEFFLEDTT LSRHWIIVME LYPAFSLYRG IYELAQYSLM GSATGTQGMQ WRDLSDPENG
401: MRDVCIIMMV EWLVVLFIAY DIDQQRISSR NGSNLKSQKF SAVSPQVENI DVFEEREKVE RWLHKPTSIY SIICHNLEKV YPERDGNPKK IGVRGLSLAI
501: SKGECFGIVG DSDAGKTSFI SMMTGITKPT SGKAFIEGLD IESQIKEIYT RIGYCPQIDL LWETLTGREH LQFYGRVKNL VGPALTQAVE NSLRRVNLVR
601: GGVGDKEVSE YSRSEKRRLS VAISLIGNPQ VVFMEEPTVG LDPVLRTSLW NAIKHAKQDR TIILTTQSME EAEALCDRIG VLADGCLQCI ASPRELKARF
701: ERFEESSTFK DTTPPCQKDE LRRLFGLPTS SGSVEK
001: MADSSPASFL TQADALLRKN LVFQKRNIWS NIRLITIPFF LCLLLLVIQM LFDTQFNDVH GQCGCNEKTC GLRYSTSEQA AFCAIPNPPQ WTPLLQIPAP
101: EYRAAIPYPS HTSPATFLFT GNNQSLGNIL MGNMYSNSSG FDGDLAYYVL GSSSFPAYTN HMDSAFISDL PIYNIQHECS PNSSFSILIH QSPLAFPKEV
201: NCVQGLNLWR NSSSDVNNEL FKGYRKGNPD KKINEFAGAF DFQNTNGNNL NVSVWYNSTY KNDTVVRPMA LIRVPRLVNL ASNAYLEFLK GSETKILFEY
301: VKEMPKPETK LSLDIASLIG PLFFTWVILL LFPVILTTLV YEKQQRLRIM MKMHGLGDVP YWIVSYTYFL LISILYMLCF AIFGSLIGLN FFRLNDYSIQ
401: LVFFFICINL QISVAFLASA MFSDVKTATV IAYIYVFGTG LLGIFLFQFF LEDPLFPRGW IIAMELYPGF SLYRGLYELS QSAFAGDYRG IDGMKWRDFG
501: NGMKEVTCIM LIEWLLLLGL AYYIDQIIYS RKHPLFFLLQ STSKKKQHFS DNKISKVVVE MEKPDVCRER EKVEQCLLKS TRDSAVLCNN LKKVYSGKDG
601: NPQKLAVRGL SLALPQGECF GMLGPNGAGK TSFINMMTGI IKPSSGTAFV QGLDILTDMD RIYTTIGVCP QHDLLWEKLS GREHLLFYGR LKNLKGSVLT
701: QAVEESLRSV NLFHGGIGDK QVSKYSGGMK RRLSVAISLI GSPKVVYMDE PSTGLDPASR KSLWDVVKRA KRKGAIILTT HSMEEAEILC DRIGIFVDGS
801: LQCIGNPKEL KSRYGGSYVL TVTTSEEHEK EVEQLVHNIS TNAKKIYRTA GTQKFELPKQ EVKIGEVFKA LEKAKTMFPV VAWGLADTTL EDVFIKVAQT
901: S
101: EYRAAIPYPS HTSPATFLFT GNNQSLGNIL MGNMYSNSSG FDGDLAYYVL GSSSFPAYTN HMDSAFISDL PIYNIQHECS PNSSFSILIH QSPLAFPKEV
201: NCVQGLNLWR NSSSDVNNEL FKGYRKGNPD KKINEFAGAF DFQNTNGNNL NVSVWYNSTY KNDTVVRPMA LIRVPRLVNL ASNAYLEFLK GSETKILFEY
301: VKEMPKPETK LSLDIASLIG PLFFTWVILL LFPVILTTLV YEKQQRLRIM MKMHGLGDVP YWIVSYTYFL LISILYMLCF AIFGSLIGLN FFRLNDYSIQ
401: LVFFFICINL QISVAFLASA MFSDVKTATV IAYIYVFGTG LLGIFLFQFF LEDPLFPRGW IIAMELYPGF SLYRGLYELS QSAFAGDYRG IDGMKWRDFG
501: NGMKEVTCIM LIEWLLLLGL AYYIDQIIYS RKHPLFFLLQ STSKKKQHFS DNKISKVVVE MEKPDVCRER EKVEQCLLKS TRDSAVLCNN LKKVYSGKDG
601: NPQKLAVRGL SLALPQGECF GMLGPNGAGK TSFINMMTGI IKPSSGTAFV QGLDILTDMD RIYTTIGVCP QHDLLWEKLS GREHLLFYGR LKNLKGSVLT
701: QAVEESLRSV NLFHGGIGDK QVSKYSGGMK RRLSVAISLI GSPKVVYMDE PSTGLDPASR KSLWDVVKRA KRKGAIILTT HSMEEAEILC DRIGIFVDGS
801: LQCIGNPKEL KSRYGGSYVL TVTTSEEHEK EVEQLVHNIS TNAKKIYRTA GTQKFELPKQ EVKIGEVFKA LEKAKTMFPV VAWGLADTTL EDVFIKVAQT
901: S
Arabidopsis Description
ABCA8ABC transporter A family member 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPK0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.