Factsheet for VIT_12s0055g00730.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
endoplasmic reticulum 4
mitochondrion 1
extracellular 5
plastid 1
vacuole 3
plasma membrane 3
golgi 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	endoplasmic reticulum
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG88422	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	70.08	18.13
HORVU3Hr1G030470.1	Barley	cytosol, extracellular, plasma membrane	21.26	16.07
HORVU4Hr1G039510.1	Barley	cytosol	20.47	15.48
HORVU6Hr1G043820.1	Barley	cytosol, endoplasmic reticulum, plasma membrane	20.47	15.48
KRH54520	Soybean	plasma membrane, plastid	73.23	11.52
Solyc06g070920.2.1	Tomato	extracellular, plasma membrane	55.91	11.13
VIT_17s0000g05860.t01	Wine grape	plasma membrane, plastid	79.53	10.64
Solyc03g113040.2.1	Tomato	plastid	69.29	9.31
Solyc03g113060.2.1	Tomato	extracellular	67.72	9.11
KRH56933	Soybean	plasma membrane, plastid	67.72	9.06
KRH03450	Soybean	plasma membrane, plastid	66.93	8.91
VIT_18s0041g02240.t01	Wine grape	plasma membrane	51.18	8.83
TraesCS7A01G367700.1	Wheat	plasma membrane	39.37	8.8
TraesCS1B01G356200.1	Wheat	plasma membrane	65.35	8.72
TraesCS1D01G345200.1	Wheat	plasma membrane	65.35	8.72
TraesCS1A01G343000.1	Wheat	plasma membrane	65.35	8.71
HORVU4Hr1G087670.8	Barley	mitochondrion	65.35	8.65
HORVU1Hr1G075620.5	Barley	plasma membrane	64.57	8.6
Os08t0398300-01	Rice	plasma membrane	64.57	8.57
KXG25097	Sorghum	plasma membrane	63.78	8.46
TraesCS4B01G365000.1	Wheat	plasma membrane	64.57	8.33
TraesCSU01G138200.1	Wheat	plasma membrane	65.35	8.32
TraesCS5A01G534100.3	Wheat	cytosol	65.35	8.22
TraesCS5A01G193200.1	Wheat	plasma membrane	60.63	8.14
TraesCS5D01G195700.1	Wheat	plasma membrane	60.63	8.14
TraesCS5B01G188600.1	Wheat	plasma membrane	60.63	8.11
Zm00001d050259_P002	Maize	plasma membrane	62.2	8.03
OQU89360	Sorghum	plasma membrane	59.84	8.02
Zm00001d020208_P003	Maize	plasma membrane	58.27	7.81
HORVU5Hr1G056930.20	Barley	plasma membrane	59.84	7.78
Os06t0589300-01	Rice	plasma membrane	56.69	7.59
VIT_11s0052g00540.t01	Wine grape	cytosol	15.75	7.46
PGSC0003DMT400083071	Potato	plasma membrane	54.33	7.38
Solyc06g070950.1.1	Tomato	plasma membrane	51.18	7.3
GSMUA_Achr7P23890_001	Banana	plasma membrane	66.93	7.26
TraesCS3D01G368700.2	Wheat	plasma membrane	54.33	7.13
TraesCS7D01G355100.1	Wheat	plastid	53.54	7.12
TraesCS7B01G260800.1	Wheat	plastid	53.54	7.11
GSMUA_Achr3P20510_001	Banana	plasma membrane	65.35	7.08
HORVU7Hr1G085680.2	Barley	endoplasmic reticulum, peroxisome, plastid	53.54	6.86
EER89983	Sorghum	plastid	51.18	6.81
Zm00001d036927_P001	Maize	plasma membrane, plastid	50.39	6.63
VIT_04s0023g00290.t01	Wine grape	plastid	17.32	6.45
VIT_14s0068g01730.t01	Wine grape	plastid	13.39	5.99
VIT_17s0000g05850.t01	Wine grape	plasma membrane	28.35	3.76
KRH63384	Soybean	plasma membrane	20.47	3.57
VIT_08s0007g08730.t01	Wine grape	mitochondrion, plasma membrane	29.92	2.02
VIT_07s0095g00600.t01	Wine grape	extracellular	0.0	0.0
Solyc06g070930.2.1	Tomato	plastid	0.0	0.0

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	InterPro:ABCA	InterPro:ABC_transporter-like	ProteinID:CCB46150	ProteinID:CCB46150.1
UniProt:F6H1T1	EMBL:FN595228	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439
InterPro:P-loop_NTPase	PFAM:PF00005	PANTHER:PTHR19229	PANTHER:PTHR19229:SF141	SUPFAM:SSF52540	UniParc:UPI00021083BC
ArrayExpress:VIT_12s0055g00730	EnsemblPlantsGene:VIT_12s0055g00730	EnsemblPlants:VIT_12s0055g00730.t01	SEG:seg	:	:

Description

No Description!

Coordinates

chr12:-:13923054..13927725

Molecular Weight (calculated)

14014.2 Da

IEP (calculated)

4.494

GRAVY (calculated)

0.215

Length

127 amino acids

Sequence
(BLAST)

001: MPKPETQLRL DLSSLLGKLF FMQVILQLFP REGVEQLLLE SSEDHAIICD LDTLEKIAMR GLSLALSHGE CFGMFGPNGA DKNYFISMLI GLTAPTSDTA
101: FVEGLDIRTH IDGIYTSMGV CPQHNLL

Best Arabidopsis Sequence Match ( AT3G47780.1 )
(BLAST)

001: MADPGPASFS TRANALLRKN LTYQKRNLWS NIRLIMIPFY LCILLVIIQI LFDTQVNNSA DNRCGCECIE RNRAGKCQRE LCGLEHSKPD QAFFCSIPRP
101: PLWPPLLQIP RPESRDVRGL RDDSCRRTGS CPVTILFTGN NRSLGTTVSE NLFTSSVSAN ASEILRTLAN NVLGTTVEAD FTNYLDPGIA SNLSIYNIQP
201: RCILNATFPF SFEQPPLKFE KELRCVQGSN LWTNTSKEVN DKIFKGYKKG NPEGKINEIA AAYDLLNTDR NNFNVHIWYN STYKDDAGNR LIKLIRVPRS
301: VNLVSNAYLQ FLQGPGTRML FEYVKEMPKP ETSLRLDIAS LIGPLFFTWV ILLLFPVILS SLVYEKQQHL RIIMKMHGLG DGPYWMISYA YFLTISVLYV
401: ICLMIFGSAI GLKFFRLNSY SIQFVFYFLY LNLQIALAFL VSSVFSKVKT STVASYIYVF GSGLLGLFLL NFLIEDSSFP RGWIIVMELY PGFSLYRGLY
501: ELAQFAFRGN LRGEDGMKWK DFGDSAMDDV FYIIVVEWFL ALIAAYYIDK ISSSGRNPLF FLQNPFKKSP SLRRPSLQRQ GSKVSVDMEK PDVTHESKKV
601: ERLMLESSTS HAIVCDNLKK VYPGRDGNPP KLAVRGLSLA VPSGECFGML GPNGAGKTSF INMMTGLLKP TSGTALVQGL DICNDMDRVY TSMGVCPQHD
701: LLWETLTGRE HLLFYGRLKN LKGADLNQAV EESLKSVNLF HGGVADKPAG KYSGGMKRRL SVAISLIGNP KVVYMDEPST GLDPASRKNL WTVIKRAKQN
801: TAIILTTHSM EEAEFLCDRL GIFVDGGLQC IGNPKELKGR YGGSYVFTMT TSSEHEQNVE KLIKDVSPNA KKIYHIAGTQ KFELPKEEVR ISEVFQAVEK
901: AKSNFTVFAW GLADTTLEDV FIKVVRNGQA FNVFS

Arabidopsis Description

ABCA7ABC transporter A family member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.