Factsheet for Solyc06g070950.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
golgi 1
plasma membrane 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX94927	Canola	cytosol	8.31	62.18
CDY02120	Canola	cytosol, nucleus, plasma membrane	44.44	60.09
CDY31786	Canola	cytosol, nucleus, plasma membrane	44.11	59.55
Solyc06g070920.2.1	Tomato	extracellular, plasma membrane	42.54	59.4
KRH54520	Soybean	plasma membrane, plastid	53.76	59.36
KRG88422	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	32.21	58.45
VIT_17s0000g05860.t01	Wine grape	plasma membrane, plastid	60.83	57.11
Bra018114.1-P	Field mustard	cytosol, peroxisome, plasma membrane	40.18	56.92
TraesCS7A01G367700.1	Wheat	plasma membrane	35.58	55.81
Solyc03g113040.2.1	Tomato	plastid	59.15	55.77
CDY23043	Canola	cytosol, mitochondrion	31.31	54.49
KRH56933	Soybean	plasma membrane, plastid	56.9	53.42
Solyc03g113060.2.1	Tomato	extracellular	56.45	53.28
AT3G47790.1	Thale cress	plasma membrane	53.54	52.94
KRH03450	Soybean	plasma membrane, plastid	56.57	52.83
KRH63384	Soybean	plasma membrane	42.99	52.61
CDY62599	Canola	plasma membrane	51.29	52.59
CDY02114	Canola	plasma membrane	52.3	52.54
AT5G61740.1	Thale cress	plasma membrane	53.54	52.48
AT3G47780.1	Thale cress	plasma membrane	54.99	52.41
CDY23039	Canola	plasma membrane	52.08	52.25
AT5G61700.1	Thale cress	plasma membrane	53.65	52.13
HORVU1Hr1G075620.5	Barley	plasma membrane	55.67	51.99
TraesCS1A01G343000.1	Wheat	plasma membrane	55.56	51.94
Bra018113.1-P	Field mustard	plasma membrane	54.88	51.91
TraesCS1D01G345200.1	Wheat	plasma membrane	55.44	51.89
CDY23798	Canola	nucleus, peroxisome, plasma membrane	22.33	51.82
CDY36930	Canola	plasma membrane	54.77	51.8
CDX68440	Canola	cytosol, mitochondrion	8.08	51.8
CDY24156	Canola	plasma membrane	54.66	51.7
TraesCS1B01G356200.1	Wheat	plasma membrane	55.22	51.68
Bra019513.1-P	Field mustard	plasma membrane	51.74	51.62
CDY36932	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	51.18	51.47
Os08t0398300-01	Rice	plasma membrane	55.22	51.41
VIT_12s0055g00730.t01	Wine grape	extracellular	7.3	51.18
KXG25097	Sorghum	plasma membrane	54.88	51.04
AT3G47750.1	Thale cress	mitochondrion, plasma membrane	53.65	51.01
CDX83025	Canola	plasma membrane	53.87	50.96
TraesCS5D01G195700.1	Wheat	plasma membrane	54.1	50.95
CDY21797	Canola	plasma membrane	51.63	50.88
AT3G47740.1	Thale cress	plasma membrane	53.2	50.86
Bra033785.1-P	Field mustard	plasma membrane	53.76	50.85
TraesCS5A01G193200.1	Wheat	plasma membrane	53.98	50.85
CDY24158	Canola	plasma membrane	52.75	50.76
AT3G47760.3	Thale cress	plasma membrane	53.2	50.64
CDX68441	Canola	plasma membrane	53.54	50.64
HORVU4Hr1G087670.8	Barley	mitochondrion	54.55	50.62
Bra018115.1-P	Field mustard	plasma membrane	52.53	50.54
Bra012931.1-P	Field mustard	cytosol, peroxisome, plasma membrane	33.45	50.34
CDX77874	Canola	plasma membrane	46.8	50.3
Bra015049.1-P	Field mustard	plasma membrane	50.28	50.17
CDX77421	Canola	plasma membrane	52.64	50.16
AT3G47770.2	Thale cress	endoplasmic reticulum, golgi, plasma membrane, plastid	51.96	50.0
CDY39546	Canola	plasma membrane	52.41	49.95
TraesCS4B01G365000.1	Wheat	plasma membrane	54.99	49.8
TraesCS5B01G188600.1	Wheat	plasma membrane	52.97	49.68
OQU89360	Sorghum	plasma membrane	52.75	49.58
Zm00001d020208_P003	Maize	plasma membrane	52.64	49.47
Zm00001d050259_P002	Maize	plasma membrane	54.55	49.39
TraesCSU01G138200.1	Wheat	plasma membrane	54.99	49.1
HORVU5Hr1G056930.20	Barley	plasma membrane	53.54	48.82
TraesCS5A01G534100.3	Wheat	cytosol	55.22	48.71
CDY36931	Canola	plastid	50.73	48.55
EER89983	Sorghum	plastid	51.52	48.11
Bra012927.1-P	Field mustard	cytosol	33.11	47.97
Os06t0589300-01	Rice	plasma membrane	51.07	47.95
TraesCS3D01G368700.2	Wheat	plasma membrane	52.08	47.93
CDY24157	Canola	plastid	51.07	47.84
Zm00001d036927_P001	Maize	plasma membrane, plastid	51.18	47.25
Bra033786.1-P	Field mustard	cytosol, mitochondrion, nucleus	15.71	46.98
TraesCS7B01G260800.1	Wheat	plastid	50.06	46.65
TraesCS7D01G355100.1	Wheat	plastid	49.94	46.6
VIT_18s0041g02240.t01	Wine grape	plasma membrane	37.49	45.38
HORVU7Hr1G085680.2	Barley	endoplasmic reticulum, peroxisome, plastid	50.28	45.21
CDX68439	Canola	nucleus	7.74	43.67
GSMUA_Achr7P23890_001	Banana	plasma membrane	56.12	42.73
CDX68438	Canola	endoplasmic reticulum, extracellular, plasma membrane	20.43	42.72
GSMUA_Achr3P20510_001	Banana	plasma membrane	55.89	42.46
HORVU3Hr1G030470.1	Barley	cytosol, extracellular, plasma membrane	7.3	38.69
HORVU6Hr1G043820.1	Barley	cytosol, endoplasmic reticulum, plasma membrane	7.18	38.1
HORVU4Hr1G039510.1	Barley	cytosol	6.73	35.71
Solyc06g070930.2.1	Tomato	plastid	8.87	28.83
Solyc03g113080.2.1	Tomato	cytosol	11.45	28.49
Solyc02g068180.2.1	Tomato	plastid	7.52	24.45
Solyc06g068600.2.1	Tomato	cytosol	5.05	24.32
Solyc06g070940.2.1	Tomato	plasma membrane	25.59	24.18
Solyc06g070960.1.1	Tomato	plasma membrane	24.24	23.33
Solyc03g117810.2.1	Tomato	cytosol	6.73	22.81
Solyc04g056650.2.1	Tomato	plastid	8.19	20.86
Solyc03g113070.2.1	Tomato	plasma membrane	13.24	20.49
Solyc04g015970.2.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	20.54	9.59

Protein Annotations

MapMan:24.1.3.2.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCA	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0006869
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626
GO:GO:0043231	GO:GO:0055085	InterPro:IPR003439	UniProt:K4C8G8	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF12698	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19229	PANTHER:PTHR19229:SF141	SMART:SM00382
SUPFAM:SSF52540	EnsemblPlantsGene:Solyc06g070950.1	EnsemblPlants:Solyc06g070950.1.1	TMHMM:TMhelix	UniParc:UPI0002766D37	:

Description

No Description!

Coordinates

chr6:-:43566711..43574717

Molecular Weight (calculated)

100255.0 Da

IEP (calculated)

8.242

GRAVY (calculated)

-0.070

Length

891 amino acids

Sequence
(BLAST)

001: MAHFWNQTNA LFRKNLVYHR RHARSHLKVI LFPAILFILL GALQSYSNKA DRGDKVKPRV GTEFPPLLQI PSPPFRAVMT DSMPFTGLPD ASCRGTGSCP
101: ATVLITGNNR TIGESVAGKM FVDSPEPTSR SDYQTIADGI FGTDGGGVRV DSNLLYHVRP QCSASPFRNS TSETDIICVE GLNLWRNSSA EINDELFKGY
201: REGNTQGMLN EILAAYDFLD TSGENFNVNV QFNSTYQSNF YNDEPELLRI PRSENMVTNA YLQFLLGSST KMVLDFVAEM PVPGGYKRPD DISTFFNIVF
301: YTWVILQVFP VILSSLVYEK QRKLRIMMKM HGLGDLPYWM ITYVYFLVIS LIYMSCYFGF GVLTGLTIFK LNSYSVQCIF YFVFTNLQIS MAFLLAAVFS
401: NLKTAAVLAY TIVFGTGILG FLLFQSLVND ASFPRGWVIF MELYPGFSLY RGLYELSQYA QGGYLVGTSG MFWEYLSYSN NGMREVLIIM SIEWVVFLIV
501: AYYLDQVISS GSGNRRSLLF FLRNSKRKHL MSLEKSSFHS AESRVQIENN DVSEEREKVE QLLEKPHSNY SAICYNLKKM YPGKDGNPDK LAVKGVTLAL
601: PRGECFGMLG PNGAGKTTFI SMMTGLLKPS SGSAYVDGLN LRTQMNEIYG SMGVCPQHDL LWDTLTGREH LLFYGRLKNL KGAALSEAVE NSLKSFNLFQ
701: GGVADKLAKK YSGGMRRRLS VAISLIGDPK VVYMDEPSTG LDPASRKMLW DVVKHAKKDR AIILTTHSMD EAEYLCDRIG IFVDGNFQCL GTSDELKARY
801: GGCYMFTMTT SPENGSKVED LVKRLSPTAK KTYHLYGTQK FELPKYEVKL SDVFLTVRQA KERFPVQSWG LADTTLEDVF IKVATEHSEF H

Best Arabidopsis Sequence Match ( AT3G47780.1 )
(BLAST)

001: MADPGPASFS TRANALLRKN LTYQKRNLWS NIRLIMIPFY LCILLVIIQI LFDTQVNNSA DNRCGCECIE RNRAGKCQRE LCGLEHSKPD QAFFCSIPRP
101: PLWPPLLQIP RPESRDVRGL RDDSCRRTGS CPVTILFTGN NRSLGTTVSE NLFTSSVSAN ASEILRTLAN NVLGTTVEAD FTNYLDPGIA SNLSIYNIQP
201: RCILNATFPF SFEQPPLKFE KELRCVQGSN LWTNTSKEVN DKIFKGYKKG NPEGKINEIA AAYDLLNTDR NNFNVHIWYN STYKDDAGNR LIKLIRVPRS
301: VNLVSNAYLQ FLQGPGTRML FEYVKEMPKP ETSLRLDIAS LIGPLFFTWV ILLLFPVILS SLVYEKQQHL RIIMKMHGLG DGPYWMISYA YFLTISVLYV
401: ICLMIFGSAI GLKFFRLNSY SIQFVFYFLY LNLQIALAFL VSSVFSKVKT STVASYIYVF GSGLLGLFLL NFLIEDSSFP RGWIIVMELY PGFSLYRGLY
501: ELAQFAFRGN LRGEDGMKWK DFGDSAMDDV FYIIVVEWFL ALIAAYYIDK ISSSGRNPLF FLQNPFKKSP SLRRPSLQRQ GSKVSVDMEK PDVTHESKKV
601: ERLMLESSTS HAIVCDNLKK VYPGRDGNPP KLAVRGLSLA VPSGECFGML GPNGAGKTSF INMMTGLLKP TSGTALVQGL DICNDMDRVY TSMGVCPQHD
701: LLWETLTGRE HLLFYGRLKN LKGADLNQAV EESLKSVNLF HGGVADKPAG KYSGGMKRRL SVAISLIGNP KVVYMDEPST GLDPASRKNL WTVIKRAKQN
801: TAIILTTHSM EEAEFLCDRL GIFVDGGLQC IGNPKELKGR YGGSYVFTMT TSSEHEQNVE KLIKDVSPNA KKIYHIAGTQ KFELPKEEVR ISEVFQAVEK
901: AKSNFTVFAW GLADTTLEDV FIKVVRNGQA FNVFS

Arabidopsis Description

ABCA7ABC transporter A family member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.