CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX94927	Canola	cytosol	65.47	76.47
PGSC0003DMT400083070	Potato	cytosol	44.6	50.0
CDY23043	Canola	cytosol, mitochondrion	58.27	15.82
CDY02120	Canola	cytosol, nucleus, plasma membrane	61.15	12.9
TraesCS7A01G367700.1	Wheat	plasma membrane	51.8	12.68
CDY31786	Canola	cytosol, nucleus, plasma membrane	59.71	12.58
KRH63384	Soybean	plasma membrane	61.15	11.68
CDY36932	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	73.38	11.51
KRH54520	Soybean	plasma membrane, plastid	64.75	11.15
CDY24158	Canola	plasma membrane	73.38	11.02
CDX77421	Canola	plasma membrane	72.66	10.8
CDY39546	Canola	plasma membrane	71.94	10.7
Solyc06g070920.2.1	Tomato	extracellular, plasma membrane	48.92	10.66
CDX83025	Canola	plasma membrane	69.78	10.3
CDX68441	Canola	plasma membrane	69.78	10.3
CDY36930	Canola	plasma membrane	69.06	10.19
CDY24156	Canola	plasma membrane	69.06	10.19
CDY24157	Canola	plastid	66.19	9.67
CDY36931	Canola	plastid	64.75	9.67
CDY62599	Canola	plasma membrane	60.43	9.67
CDY23039	Canola	plasma membrane	60.43	9.46
CDY02114	Canola	plasma membrane	59.71	9.36
CDY21797	Canola	plasma membrane	60.43	9.29
Solyc03g113060.2.1	Tomato	extracellular	60.43	8.9
Solyc03g113040.2.1	Tomato	plastid	57.55	8.47
TraesCS1D01G345200.1	Wheat	plasma membrane	57.55	8.4
TraesCS1A01G343000.1	Wheat	plasma membrane	57.55	8.39
KRH03450	Soybean	plasma membrane, plastid	57.55	8.39
TraesCS1B01G356200.1	Wheat	plasma membrane	56.83	8.3
HORVU1Hr1G075620.5	Barley	plasma membrane	56.83	8.28
Os08t0398300-01	Rice	plasma membrane	56.83	8.25
KRH56933	Soybean	plasma membrane, plastid	56.12	8.22
Os06t0589300-01	Rice	plasma membrane	56.12	8.22
KXG25097	Sorghum	plasma membrane	56.12	8.14
OQU89360	Sorghum	plasma membrane	55.4	8.12
Solyc06g070950.1.1	Tomato	plasma membrane	51.8	8.08
Zm00001d050259_P002	Maize	plasma membrane	56.83	8.03
TraesCS4B01G365000.1	Wheat	plasma membrane	56.83	8.03
HORVU4Hr1G087670.8	Barley	mitochondrion	55.4	8.02
Zm00001d020208_P003	Maize	plasma membrane	54.68	8.02
TraesCSU01G138200.1	Wheat	plasma membrane	57.55	8.02
EER89983	Sorghum	plastid	54.68	7.97
TraesCS5A01G193200.1	Wheat	plasma membrane	53.96	7.93
TraesCS5B01G188600.1	Wheat	plasma membrane	53.96	7.89
TraesCS7B01G260800.1	Wheat	plastid	53.96	7.85
TraesCS5D01G195700.1	Wheat	plasma membrane	53.24	7.82
TraesCS5A01G534100.3	Wheat	cytosol	56.83	7.82
Zm00001d036927_P001	Maize	plasma membrane, plastid	53.96	7.77
TraesCS7D01G355100.1	Wheat	plastid	53.24	7.75
HORVU5Hr1G056930.20	Barley	plasma membrane	53.24	7.57
TraesCS3D01G368700.2	Wheat	plasma membrane	51.08	7.33
HORVU7Hr1G085680.2	Barley	endoplasmic reticulum, peroxisome, plastid	51.8	7.27
GSMUA_Achr7P23890_001	Banana	plasma membrane	58.99	7.01
GSMUA_Achr3P20510_001	Banana	plasma membrane	57.55	6.82
CDY62594	Canola	cytosol	16.55	5.03
CDX68434	Canola	plasma membrane	20.14	3.94
CDX96058	Canola	cytosol	7.19	3.79
CDY01873	Canola	cytosol	7.19	3.79
CDY23800	Canola	plasma membrane	24.46	3.72
CDY64180	Canola	plasma membrane	16.55	3.67
CDX69605	Canola	plastid	7.19	3.65
CDY58413	Canola	cytosol, plastid	7.19	3.65
CDY02116	Canola	plasma membrane	21.58	3.57
CDY23042	Canola	plasma membrane	23.74	3.52
CDY02118	Canola	plasma membrane	23.74	3.32
CDY24159	Canola	golgi, mitochondrion	22.3	3.31
CDX77874	Canola	plasma membrane	19.42	3.26
CDY36933	Canola	golgi, mitochondrion	22.3	3.21
CDY52820	Canola	cytosol, nucleus, plasma membrane	20.14	3.19
CDY23040	Canola	plasma membrane	21.58	3.14
CDY57805	Canola	plastid	6.47	2.74
CDY16404	Canola	plastid	6.47	2.74
CDX68436	Canola	plasma membrane	5.76	2.72
CDY24573	Canola	plasma membrane	2.88	2.52
CDX68438	Canola	endoplasmic reticulum, extracellular, plasma membrane	6.47	2.11
CDX68439	Canola	nucleus	2.16	1.9
CDY22536	Canola	mitochondrion, plasma membrane	23.74	1.78
CDY35403	Canola	mitochondrion, plasma membrane	23.02	1.72
CDY02119	Canola	endoplasmic reticulum, plasma membrane, plastid	2.16	1.68
CDX68435	Canola	mitochondrion, plastid	2.88	1.53
CDY23799	Canola	cytosol, peroxisome, plasma membrane	2.16	1.47
KRG88422	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	5.04	1.43
CDY62596	Canola	cytosol, plasma membrane, vacuole	2.88	1.3
CDY02115	Canola	extracellular, mitochondrion, plasma membrane, plastid	2.16	0.82
CDY23798	Canola	nucleus, peroxisome, plasma membrane	2.16	0.78
HORVU3Hr1G030470.1	Barley	cytosol, extracellular, plasma membrane	0.72	0.6
HORVU6Hr1G043820.1	Barley	cytosol, endoplasmic reticulum, plasma membrane	0.72	0.6
HORVU4Hr1G039510.1	Barley	cytosol	0.72	0.6
CDY39288	Canola	cytosol	0.72	0.51
Solyc06g070930.2.1	Tomato	plastid	0.72	0.36

Protein Annotations

EnsemblPlants:CDX68440	EnsemblPlantsGene:GSBRNA2T00125868001	GO:A0A078BUL4	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0042626	GO:GO:0055085	InterPro:ABCA	PANTHER:PTHR19229	PANTHER:PTHR19229:SF127	ProteinID:CDX68440
ProteinID:CDX68440.1	UniParc:UPI0004EBC3B2	MapMan:35.1	:	:	:

Description

BnaC01g25180D

Coordinates

chrLK031788:+:1479554..1480203

Molecular Weight (calculated)

15801.9 Da

IEP (calculated)

10.255

GRAVY (calculated)

-0.565

Length

139 amino acids

Sequence
(BLAST)

001: MVRRNSVGKY RRNSDNFAVN RNVVGIYRRT SNDYNDGGLQ CIGNPKELKG RYGGSYVLTM TTAPEHAKDV EMLVQDVSPN ARKLYHIAGT QKFEIPKEEV
101: RISQVFQAVE KAKRSFKVFA LADTTLEDVF IKVARRSDL

Best Arabidopsis Sequence Match ( AT3G47740.1 )
(BLAST)

001: MADSGPASFW TRANAILRKN LTYQKRNIWS NVRLIMIPFY LCIVLVFIQA LFDSQVNNSL DNQCGCQCID KLGDGKCQMT CGLEYSTRDQ GFFCAIPKPQ
101: PWPPLILIPR PEYRALDANF TNDSCRRKNS CPVTILFTGN NHSLGAVLSR NLLRRPFAMN SSDLLFSLAN NVLATTFKGS ATNYLDAGIV SDGSIYNIQP
201: RCPPNSNFSI SIGQSPLNFT KDMRCVQGLN LWRNNSIEVN LELFEGYHKG NSDGMINEIV AAYDLFDTNM TNFNVNIWFN ATYKDEARNQ PYKVVRVPRL
301: VNWVSNAYLQ YLQGPRTKML FEFVKEMPKP ETKLRLDIAS LIGPIFFTWV ILLLLPVILN SLVYEKQQRL RIIMKMHGLG DGPYWIISYA YFLALSTFYI
401: IFLMIFGSVI GLKFFLLNDF SLQFSFYFVY INLQISIAFL LSSAFSKVET ASVAAYLYVF GSGLLGMFLF QFLLEGLSFP RRWIFVMELY PGFSLYRGLY
501: EFSQNAYQGN LNGKDGMKWK YFSDNAIDEV FYIIIVEWFV ALIATYYIDK MSSSGKDLLF FLKNQNPFKI SHSLQKQVSA ISVEMEKLDV IHESEKVAQL
601: MLESSTSHAI VCDKLRKVYP GRDGNPPKKA VRVLSLAVPS GECFGMLGPN GAGKTSFINM MTGLVKPTSG AAFVQGLDIC KDMDRVYTSM GVCPQHDLLW
701: ETLTGREHLL FYGRLKNLKG VDLNQAVEES LRSVNLFHGG VADKPAGKYS GGMKRRLSVA ISLIGNPKVV YMDEPSTGLD PASRKNLWTV IKNAKRHTAI
801: ILTTHSMEEA EFLCDRLGIF VDGRLQCIGN PKELKGRYGG SYVLTMTTSS EHEKDVEMLV QEVSPNVKKI YHIAGTQKFE IPKDEVRISE VFQVVEKAKS
901: NFKVFAWGLA DTTLEDVFIK VARTAQAFNV FS

Arabidopsis Description

ABCA3ABC transporter A family member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEH6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.