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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 3
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:endoplasmic reticulum, plasma membrane, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Predotar:plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY02115 Canola extracellular, mitochondrion, plasma membrane, plastid 37.42 97.81
CDY02116 Canola plasma membrane 85.12 96.67
CDY52820 Canola cytosol, nucleus, plasma membrane 86.06 93.51
CDY62594 Canola cytosol 44.23 92.34
CDY64180 Canola plasma membrane 59.75 90.91
CDY62596 Canola cytosol, plasma membrane, vacuole 28.62 88.93
AT5G61730.2 Thale cress plasma membrane, plastid 85.43 85.79
CDY23042 Canola plasma membrane 81.13 82.6
CDY23800 Canola plasma membrane 77.88 81.2
CDY02118 Canola plasma membrane 80.82 77.49
CDY24159 Canola golgi, mitochondrion 72.22 73.53
CDY36933 Canola golgi, mitochondrion 73.38 72.54
GSMUA_Achr3P20540_001 Banana cytosol, extracellular, nucleus 12.79 71.76
VIT_17s0000g05850.t01 Wine grape plasma membrane 68.55 68.27
CDX68434 Canola plasma membrane 49.16 66.06
CDX68435 Canola mitochondrion, plastid 18.03 65.9
PGSC0003DMT400046727 Potato plasma membrane 64.26 65.63
GSMUA_Achr7P23880_001 Banana plasma membrane 65.2 64.93
KRH54517 Soybean plasma membrane 65.41 64.53
KRH63387 Soybean plasma membrane, plastid 63.63 63.1
TraesCS1B01G356100.2 Wheat plasma membrane 63.52 62.86
EES14950 Sorghum mitochondrion, plasma membrane, plastid 63.21 62.75
TraesCS1A01G342900.2 Wheat plasma membrane 63.52 62.73
TraesCS1D01G345100.2 Wheat mitochondrion, plasma membrane, plastid 63.42 62.69
Zm00001d032279_P005 Maize golgi, plastid 62.89 61.86
Os08t0398000-01 Rice plasma membrane 62.68 61.78
HORVU1Hr1G075640.9 Barley golgi 62.89 61.29
GSMUA_Achr3P20560_001 Banana plastid 17.82 59.23
Solyc06g070960.1.1 Tomato plasma membrane 55.56 57.24
CDY02120 Canola cytosol, nucleus, plasma membrane 20.55 29.74
CDY31786 Canola cytosol, nucleus, plasma membrane 20.55 29.7
CDY23043 Canola cytosol, mitochondrion 15.83 29.49
CDX94927 Canola cytosol 3.67 29.41
CDX68439 Canola nucleus 4.82 29.11
CDX77874 Canola plasma membrane 22.85 26.3
CDY21797 Canola plasma membrane 24.11 25.44
CDY36932 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 23.17 24.94
CDY62599 Canola plasma membrane 22.33 24.51
CDY36930 Canola plasma membrane 24.11 24.42
CDY02114 Canola plasma membrane 22.64 24.35
CDY23039 Canola plasma membrane 22.54 24.21
CDY24158 Canola plasma membrane 23.48 24.19
CDY24156 Canola plasma membrane 23.79 24.1
CDY24157 Canola plastid 23.9 23.97
CDY36931 Canola plastid 23.38 23.95
CDY24573 Canola plasma membrane 3.98 23.9
CDX83025 Canola plasma membrane 23.48 23.78
CDY23798 Canola nucleus, peroxisome, plasma membrane 9.54 23.7
CDY39546 Canola plasma membrane 22.96 23.42
CDY58413 Canola cytosol, plastid 6.71 23.36
CDX77421 Canola plasma membrane 22.85 23.32
CDX68441 Canola plasma membrane 22.96 23.25
CDX68438 Canola endoplasmic reticulum, extracellular, plasma membrane 10.27 23.0
CDX69605 Canola plastid 6.6 22.99
CDX68440 Canola cytosol, mitochondrion 3.14 21.58
CDY16404 Canola plastid 7.23 20.97
CDY01873 Canola cytosol 5.77 20.83
CDY57805 Canola plastid 7.13 20.67
CDX96058 Canola cytosol 5.66 20.45
CDX68436 Canola plasma membrane 5.24 17.01
CDY39288 Canola cytosol 3.04 14.65
CDY22536 Canola mitochondrion, plasma membrane 26.73 13.76
CDY35403 Canola mitochondrion, plasma membrane 26.52 13.6
CDY02119 Canola endoplasmic reticulum, plasma membrane, plastid 2.31 12.29
CDY23799 Canola cytosol, peroxisome, plasma membrane 2.62 12.25
Protein Annotations
MapMan:24.1.3.2.1Gene3D:3.40.50.300MapMan:5.8.5GO:A0A078G9F6UniProt:A0A078G9F6InterPro:AAA+_ATPase
InterPro:ABCAInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDY23040ProteinID:CDY23040ProteinID:CDY23040.1
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0016887GO:GO:0042626GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00021504001InterPro:IPR003439InterPro:P-loop_NTPase
PFAM:PF00005PFAM:PF12698ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19229PANTHER:PTHR19229:SF193
SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0004EE0640SEG:seg:
Description
BnaC07g31470DBnaC07g31470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G9F6]
Coordinates
chrLK032139:+:246133..250478
Molecular Weight (calculated)
105846.0 Da
IEP (calculated)
8.003
GRAVY (calculated)
0.104
Length
954 amino acids
Sequence
(BLAST)
001: MTLIEGMPLL HQQFTALFKK NLLLSWRNKS ATCLHLFSSF FFIFLIFCIQ EAMKASDVSS SADVNITDPK ASASSPIPPC EDKFYVKLPC YDFVWSGNQS
101: RRVSDIVSAI MANNPGRPIP TNKVKSFKGT EEVDAWFTSH PLHAPGALHF TERNATVISY GVQTNSSSAT KRGRTEDPTF KFLVPLQIAA EREIARFLIG
201: DPKFGWSFGF KEFAQPAVAK DVTISPLNLM GPVFFLAFSM FGFVLQLGSL ATEKELKLRQ AMTVMGVYDT AYWLSWLIWE GILTFVSSLF LVLFGMMFQF
301: DFFLKNSFFV VFLLFLLFQF NMISLAFMLS SFISKSSSAT TVGFLVFLIG FITQTVATSG FPYSSTHSLS RRVIWSFFPP NTFSAGLQLL IEATSVPGSP
401: GISWSKRDVC SKMDDATCFL TMNKIYIWLV GTFFFWFVLA VYFDNIIPNA CGVRKTIFYF LKPSYWTGKE GNRVEEGSIC SCFGSVPPVE HLTPDDQDVL
501: EEETLVKKQA MDGTVDPNIA VQIHGLAKMY PGTTKLGCCK CTKTSPFHAV KGLWMNIAKD QLFCLLGPNG AGKTTTISCL TGINPVTGGD ALIYGDSIRS
601: SVGMSNIRKM IGVCPQFDIL WDALSSEEHL HLFASIKGLP PASIKRIAEK LLADVKLTGA AKIRAGSYSG GMKRRLSVAI ALIGDPKLVF LDEPTTGMDP
701: ITRRHVWDII QESKKGRAII LTTHSMEEAD ILGDRIGIMA KGRLRCIGTS IRLKSRFGTG FITTVSFHEN KNDGSGTSPE PLKRFFKKHL KVEPIEEKKA
801: FMTFVIPHDK EKLLAGFFEE LQYRESEFGI SDIQLGLATL EEVFLNIARR AELESATAEG TVVTLELESG ILVEIPVGAR FVGIPGTENA ENPRGMMVEV
901: YWQQDGSGTM CISGHSPEMR IPQNVSVLYE PPSQVLGRGQ RRVRGSVIDY ESSD
Best Arabidopsis Sequence Match ( AT5G61730.2 )
(BLAST)
001: MTLREGLPLF HQQFTALFKK NLLLSWRNKR ATCLHLFSSF FFILLIFSIE ESSKASDLTS TRHKNVTDPK ALVSLPILPC EDKFFVRLPC FDFVWSGNQS
101: RRVTDIVSAI MANNPGRPIP TNKVQSFTKP EEVDAWFMSH PSQVTGALHF VEKNATVISY GIQTNSSSEK KRGRREDPTF KFLVPLQIAA EREIARSLIG
201: DPKFSWDFGF KEFARPAIGG EVIISAFYLM GPVFFLAFSM FGFVLQLGSV VTEKELKLRE AMTTMGVYES AYWLSWLIWE GILTFVSSLF LVLFGMMFQF
301: EFFLKNSFVL VFLLFFLFQF NMIGLAFALS SIISKSSSAT TVGFLVFLVG FITQIVTTAG FPYSSAYSIG SRVIWSLFPP NTFSAGLQLL LEATSSPGDS
401: GISWSERAIC AGGESTCVIT TNKIYIWLVG TFFFWFVLAL YFDNIIPNAS GVRKSIFYFL KPSYWTGKEG NKVEEGSICS CIGSVPPVEH ITPEDEDVLE
501: EEILVKQQAM DGRVDPNIAV QIHGLAKTYP GTTKLGCCKC TKTSPFHAVK GLWMNIAKDQ LFCLLGPNGA GKTTTISCLT GINPVTGGDA KIYGNSIRSS
601: VGMSNIRKMI GVCPQFDILW DALSSEEHLH LFASIKGLPP SSIKSIAEKL LVDVKLTGSA KIRAGSYSGG MKRRLSVAIA LIGDPKLVFL DEPTTGMDPI
701: TRRHVWDIIQ ESKKGRAIIL TTHSMEEADI LSDRIGIMAK GRLRCIGTSI RLKSRFGTGF VATVSFIENK KDGAPEPLKR FFKERLKVEP TEENKAFMTF
801: VIPHDKEQLL KGFFAELQDR ESEFGIADIQ LGLATLEEVF LNIARRAELE SATVEGTMVT LELESGIAVE IPVGARFVGI PGTENAENPR GLMVEVYWQQ
901: DGSGSMCISG HSAEMRIPEN VSVIYEPSSQ VLGHGQRRVR GIVIDYESNN
Arabidopsis Description
ABCA9ABC transporter A family member 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLT5]
SUBAcon: [plasma membrane,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.