Factsheet for Zm00001d032279_P005

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid

Predictor Summary:

plastid 3
golgi 2
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES14950	Sorghum	mitochondrion, plasma membrane, plastid	96.08	96.98
Os08t0398000-01	Rice	plasma membrane	88.97	89.15
TraesCS1B01G356100.2	Wheat	plasma membrane	87.11	87.66
TraesCS1D01G345100.2	Wheat	mitochondrion, plasma membrane, plastid	87.01	87.46
TraesCS1A01G342900.2	Wheat	plasma membrane	86.6	86.96
HORVU1Hr1G075640.9	Barley	golgi	85.98	85.19
GSMUA_Achr7P23880_001	Banana	plasma membrane	73.92	74.84
GSMUA_Achr3P20540_001	Banana	cytosol, extracellular, nucleus	11.96	68.24
PGSC0003DMT400046727	Potato	plasma membrane	64.95	67.45
VIT_17s0000g05850.t01	Wine grape	plasma membrane	66.29	67.12
GSMUA_Achr3P20560_001	Banana	plastid	19.79	66.9
CDY24159	Canola	golgi, mitochondrion	63.4	65.64
KRH54517	Soybean	plasma membrane	64.43	64.63
CDY64180	Canola	plasma membrane	41.75	64.59
CDY36933	Canola	golgi, mitochondrion	64.12	64.46
Bra018116.1-P	Field mustard	golgi, mitochondrion	65.36	64.3
AT5G61690.2	Thale cress	plasma membrane	62.58	63.69
AT5G61730.2	Thale cress	plasma membrane, plastid	62.37	63.68
CDY62594	Canola	cytosol	30.0	63.68
CDY02116	Canola	plasma membrane	55.05	63.57
AT3G47730.1	Thale cress	mitochondrion, plasma membrane	63.81	62.97
CDY23040	Canola	plasma membrane	61.86	62.89
CDY23042	Canola	plasma membrane	60.72	62.86
CDX68435	Canola	mitochondrion, plastid	16.91	62.84
Bra012928.1-P	Field mustard	plasma membrane	60.0	62.78
KRH63387	Soybean	plasma membrane, plastid	61.96	62.47
CDY23800	Canola	plasma membrane	58.87	62.4
CDY52820	Canola	cytosol, nucleus, plasma membrane	54.95	60.71
CDY02118	Canola	plasma membrane	60.31	58.79
CDY62596	Canola	cytosol, plasma membrane, vacuole	18.25	57.65
Bra012930.1-P	Field mustard	plasma membrane	53.51	57.16
CDX68434	Canola	plasma membrane	41.75	57.04
Solyc06g070960.1.1	Tomato	plasma membrane	54.02	56.59
Zm00001d020208_P003	Maize	plasma membrane	23.3	23.84
Zm00001d050259_P002	Maize	plasma membrane	24.02	23.68
Zm00001d036927_P001	Maize	plasma membrane, plastid	23.2	23.32
Zm00001d016395_P001	Maize	plasma membrane, plastid	20.93	23.07
Zm00001d050260_P001	Maize	mitochondrion	21.86	21.57
Zm00001d014611_P001	Maize	cytosol, mitochondrion, plasma membrane	4.12	21.28
Zm00001d016396_P001	Maize	plasma membrane	16.29	20.68
Zm00001d007328_P003	Maize	plastid	6.19	19.8
Zm00001d047131_P001	Maize	plastid	2.89	19.31
Zm00001d003145_P001	Maize	mitochondrion	2.47	19.05
Zm00001d019644_P003	Maize	plastid	7.11	18.21
Zm00001d053603_P005	Maize	plasma membrane	23.2	17.72

Protein Annotations

EntrezGene:103643314	MapMan:24.1.3.2.1	Gene3D:3.40.50.300	MapMan:5.8.5	UniProt:A0A1D6KPM2	InterPro:AAA+_ATPase
InterPro:ABCA	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085
InterPro:IPR003439	ProteinID:ONM04749.1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF12698	ScanProsite:PS00211
PFscan:PS50893	PANTHER:PTHR19229	PANTHER:PTHR19229:SF193	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix
UniParc:UPI000842DDDF	EnsemblPlantsGene:Zm00001d032279	EnsemblPlants:Zm00001d032279_P005	EnsemblPlants:Zm00001d032279_T005	SEG:seg	:

Description

ABC2 homolog 15

Coordinates

chr1:-:220036843..220043811

Molecular Weight (calculated)

108269.0 Da

IEP (calculated)

7.644

GRAVY (calculated)

-0.005

Length

970 amino acids

Sequence
(BLAST)

001: MELLSGGALA WQQYRALLRK NATLTWRNRR SAALQLFSSL VFIFLIFCID RAVRSRFSST TAYRNVPDPE ALVAPPIPPC EDKFFIKSPC YDFLWSDGGS
101: ARIRGLVDAI RRNNPGRPIA PEKVLGFRTP DDVDAWLFQN PMRCPGALHF QDINATQIKY GIQTNSTPVA RRGTYEDPTF KFQIPLQVAA EREMARLLIG
201: DPNFSWTVGF KEFAHPATET FSTIAQAGPT FFLAIAMFGF VFQISALVAE KELKLRQAMS TMGLYESAYW LSWFTWEAFL TTLSALFTVL FGMMFQFDFF
301: LHNNFGILFL LFFLFQLNMR HPSCFLQLSF AFMISTFVAK AASATTVGFA IFIIGFLTQL VTTFGFPYSS DYKKLYRTLW SLFPPDLFAK ALNILGKATA
401: TPEDKGFSWN QRGECPSFET DCVITIDDIY KWLISTFFLW FVLAIYFDNI LPNVNGVRKS VFYFLMPSYW TGKGGKMEEG GLFSFFGSSR PADDATPTDE
501: DVLAEQNLVK EQAANNAVDP NVAVQIHGLR KTYPGTFSIG CCCKCSKSKP FHSVKGLWVN LEKDQLFCLL GPNGAGKTTT ISCLTGITPI TGGDAFIYGH
601: SVRSTVGMSN IRRMIGVCPQ FDILWDALTA KEHMELFASI KGLHPAAITS VAEESLAKVK LSQVTNARAG SYSGGMKRRL SVAIALIGDP KLVFLDEPTT
701: GMDPITRRHV WDIIEEAKKG RAIVLTTHSM EEADILGDRI AIMAKGKLRC IGTSIRLKSK FGTGYIANVN FSGNGHMQSP NINSNTEAPV NPNIEAVKWF
801: FKERLDVNPK EESRTFLTFV IPHHKEPLLT RFFGELQDRE GEFGISDIQL GLTTLEEVFL NIAKQAELET STAEGTLVTL NLSSGTTIQI PKGARFVGIP
901: GTETEEHPRG IMVEVYWDQD ENGSLCISGH SDEMPVPVHA ELRRPPSLSR RASMDRGRPV GYMIDLNQVP

Best Arabidopsis Sequence Match ( AT3G47730.1 )
(BLAST)

001: MTLQRGLPLL LQQYTALFKK NLLLSWRSKR ATFLQLFASF FFILLIFCIQ AAMEKSFASS TALKTVTDPT ALISPPIPPC EDKFFVNLPC YDFVWSGNRS
101: SKVTQIVNAI MKNNPGRSIP IEKVRSFVDP EAVDTWLMAN PLLVPGALHF IERNATVISY GIQTNSTPEM NRGRFEDPTF KFQIPLQIAA EREIARSLIG
201: DPNFNWVVGF KEFPHPTIEA IVALDTIGPT FFLAVAMFGF VLQISSLITE KELKLRQAMT MMGVFDTAYW LSWLTWEGIL TAISALLTVL FGMMFQFDFF
301: LKNSFPVVFL LFMLFQFNLI GLAFMLSAFI SKSTSATTVG FFVFLVGFVT QLATSSGFPY AKKYSRMIRA LWSLFPPNTF SQGLKLLADA TSTPQDPGIS
401: WSKRAECGPN DDTGCVLTIN DIYLWLLGTF FLWFVLALYF DNITPNASGV RKSIFYFLKP GYWTGKGGNR VEEGGICSCI GSVPPVDHIT PDDEDVLEEE
501: TLVKQHSMEG LVDPNVAVQI RGLAKTYPGT TKFGCCKCKK TSPFHALKGL WMNIAKDQLF CLLGPNGAGK TTTINCLTGL FPVTGGDALI YGNSIRSSVG
601: MSNIRKMIGV CPQFDILWDA LSGEEHLKLF ASIKGLPPSS INSMVEKSLA EVKLTEAGKI RAGSYSGGMK RRLSVAVSLI GDPKLVFLDE PTTGMDPITR
701: RHVWDIIQET KKGRAIILTT HSMEEADILS DRIGIMAKGR LRCIGTSIRL KSRFGTGFIA NISFVESNNH NGEAGSDSRE PVKKFFKDHL KVKPIEENKA
801: FMTFVIPHDK ENLLTSFFAE LQDREEEFGI SDIQLGLATL EEVFLNIARK AELESAAVDG TMVTLDLTSG SSVEIPVGAR FIGIPGTETA ENPRGVMVEV
901: YWQQDESGSL CISGHSTEMP IPENIPVTDP VAPGHGGVNL LGRRGRRQVQ GIVIDPEFAT FTRSGSTSSR RFSRSGSSRR FSS

Arabidopsis Description

ABCA2ATH1 [Source:UniProtKB/TrEMBL;Acc:A0A178V6R6]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.