Factsheet for Zm00001d019644_P003

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96343	Sorghum	plastid	88.92	95.47
Os03t0670100-01	Rice	plastid	76.78	82.44
Zm00001d003145_P001	Maize	mitochondrion	26.91	80.95
TraesCS5B01G369900.1	Wheat	plastid	73.35	77.87
GSMUA_Achr1P08960_001	Banana	cytosol, mitochondrion, plastid	60.69	77.7
Zm00001d047131_P001	Maize	plastid	29.02	75.86
TraesCS5A01G367900.1	Wheat	golgi	72.56	72.18
KRH40333	Soybean	plastid	64.91	71.3
CDY16404	Canola	plastid	61.74	71.12
TraesCS5D01G377300.1	Wheat	cytosol, peroxisome, plastid	73.88	70.89
Bra022481.1-P	Field mustard	plastid	61.48	70.82
CDY57805	Canola	plastid	61.48	70.82
HORVU5Hr1G091750.1	Barley	plastid	72.3	70.8
VIT_04s0023g00290.t01	Wine grape	plastid	63.32	70.38
AT1G65410.1	Thale cress	plastid	63.06	69.28
Solyc04g056650.2.1	Tomato	plastid	63.32	68.57
KRH00900	Soybean	plastid	63.06	60.51
CDY39288	Canola	cytosol	25.33	48.48
Zm00001d014611_P001	Maize	cytosol, mitochondrion, plasma membrane	15.57	31.38
Zm00001d007328_P003	Maize	plastid	16.09	20.13
Zm00001d050260_P001	Maize	mitochondrion	21.37	8.24
Zm00001d036927_P001	Maize	plasma membrane, plastid	19.79	7.77
Zm00001d050259_P002	Maize	plasma membrane	19.79	7.62
Zm00001d020208_P003	Maize	plasma membrane	19.0	7.59
Zm00001d016396_P001	Maize	plasma membrane	14.51	7.2
Zm00001d032279_P005	Maize	golgi, plastid	18.21	7.11
Zm00001d016395_P001	Maize	plasma membrane, plastid	15.3	6.59
Zm00001d053603_P005	Maize	plasma membrane	20.05	5.98

Protein Annotations

EntrezGene:100280328	Gene3D:3.40.50.300	MapMan:5.8.2.2.3	UniProt:A0A1D6HZH7	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	ProteinID:ONM53481.1	InterPro:P-loop_NTPase	PFAM:PF00005
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR43023	PANTHER:PTHR43023:SF3	SMART:SM00382	SUPFAM:SSF52540
UniParc:UPI000843D80E	EnsemblPlantsGene:Zm00001d019644	EnsemblPlants:Zm00001d019644_P003	EnsemblPlants:Zm00001d019644_T003	:	:

Description

Protein TRIGALACTOSYLDIACYLGLYCEROL 3 chloroplastic

Coordinates

chr7:+:47868339..47872065

Molecular Weight (calculated)

41476.9 Da

IEP (calculated)

7.036

GRAVY (calculated)

-0.116

Length

379 amino acids

Sequence
(BLAST)

001: MASPSIPAAL RHPHLPADGG LLFHSSGDPT ARSSLSFRQN FLSQRLFFPC CHIYFLAPHR ETFWIGDMTM RRCQTGPGPV LAARSPGLGN VDNLHESSSL
101: SRSWDLNRQI DDDRDVLIEC RDVHKSFGEK QVLRGVSFKI RHGEAVGIIG PSGTGKSTIL KVMAGLLAPD KGDVIICGKK RHGLVSDEDI EGLRIGLVFQ
201: SAALFDSLTV RENVGFLLYE NSSLPEDRIG KLVTETLAAV GLKGVEDRMP SELSGGMKKR VALARSIIFD DTKDVVEPEV LLYDEPTAGL DPIASTVVED
301: LIRSVHMTGR DALGKPGKIA SYVVVTHQHS TIRRAVDRLL FLHEGKVVWE GMTHEFTTSA NPIVQQFASG SLDGPIKYF

Best Arabidopsis Sequence Match ( AT1G65410.1 )
(BLAST)

001: MLSLSCSSSS SSLLPPSLHY HGSSSVQSIV VPRRSLISFR RKVSCCCIAP PQNLDNDATK FDSLTKSGGG MCKERGLEND SDVLIECRDV YKSFGEKHIL
101: KGVSFKIRHG EAVGVIGPSG TGKSTILKIM AGLLAPDKGE VYIRGKKRAG LISDEEISGL RIGLVFQSAA LFDSLSVREN VGFLLYERSK MSENQISELV
201: TQTLAAVGLK GVENRLPSEL SGGMKKRVAL ARSLIFDTTK EVIEPEVLLY DEPTAGLDPI ASTVVEDLIR SVHMTDEDAV GKPGKIASYL VVTHQHSTIQ
301: RAVDRLLFLY EGKIVWQGMT HEFTTSTNPI VQQFATGSLD GPIRY

Arabidopsis Description

TGD3Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9AT00]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.