Factsheet for Zm00001d003145_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047131_P001	Maize	plastid	76.98	66.9
CDY39288	Canola	cytosol	56.35	35.86
GSMUA_Achr1P08960_001	Banana	cytosol, mitochondrion, plastid	67.46	28.72
EER96343	Sorghum	plastid	78.57	28.05
Bra022481.1-P	Field mustard	plastid	73.02	27.96
CDY16404	Canola	plastid	73.02	27.96
CDY57805	Canola	plastid	72.22	27.66
Os03t0670100-01	Rice	plastid	76.19	27.2
Zm00001d019644_P003	Maize	plastid	80.95	26.91
KRH40333	Soybean	plastid	73.02	26.67
TraesCS5B01G369900.1	Wheat	plastid	75.4	26.61
VIT_04s0023g00290.t01	Wine grape	plastid	71.43	26.39
Solyc04g056650.2.1	Tomato	plastid	72.22	26.0
AT1G65410.1	Thale cress	plastid	70.63	25.8
TraesCS5A01G367900.1	Wheat	golgi	75.4	24.93
HORVU5Hr1G091750.1	Barley	plastid	75.4	24.55
TraesCS5D01G377300.1	Wheat	cytosol, peroxisome, plastid	76.19	24.3
KRH00900	Soybean	plastid	72.22	23.04
Zm00001d014611_P001	Maize	cytosol, mitochondrion, plasma membrane	25.4	17.02
Zm00001d007328_P003	Maize	plastid	17.46	7.26
Zm00001d036927_P001	Maize	plasma membrane, plastid	25.4	3.32
Zm00001d016396_P001	Maize	plasma membrane	19.84	3.27
Zm00001d050260_P001	Maize	mitochondrion	25.4	3.26
Zm00001d050259_P002	Maize	plasma membrane	24.6	3.15
Zm00001d020208_P003	Maize	plasma membrane	22.22	2.95
Zm00001d032279_P005	Maize	golgi, plastid	19.05	2.47
Zm00001d053603_P005	Maize	plasma membrane	18.25	1.81
Zm00001d016395_P001	Maize	plasma membrane, plastid	11.11	1.59

Protein Annotations

EnsemblPlants:Zm00001d003145_P001	EnsemblPlants:Zm00001d003145_T001	EnsemblPlantsGene:Zm00001d003145	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0016787	GO:GO:0016887	InterPro:ABC_transporter-like
InterPro:IPR003439	InterPro:P-loop_NTPase	PANTHER:PTHR43023	PANTHER:PTHR43023:SF3	PFAM:PF00005	ProteinID:ONM16218.1
SUPFAM:SSF52540	UniParc:UPI0008452A94	UniProt:A0A1D6E701	MapMan:5.8.2.2.3	:	:

Description

Protein TRIGALACTOSYLDIACYLGLYCEROL 3 chloroplastic

Coordinates

chr2:-:33645251..33646469

Molecular Weight (calculated)

13502.7 Da

IEP (calculated)

9.225

GRAVY (calculated)

0.262

Length

126 amino acids

Sequence
(BLAST)

001: MRSSVILKFK RSMMVRHGEA VGIIGPSGTG KSTILKVMAG LLAPDKGDVI ICGKKRHGIV SDEDIEGLRI DLVFQSAALF DSLTVRENVG FLLYKNSSLP
101: EDRIGELVTE TLAAVGLKAS QASIFV

Best Arabidopsis Sequence Match ( AT1G65410.1 )
(BLAST)

001: MLSLSCSSSS SSLLPPSLHY HGSSSVQSIV VPRRSLISFR RKVSCCCIAP PQNLDNDATK FDSLTKSGGG MCKERGLEND SDVLIECRDV YKSFGEKHIL
101: KGVSFKIRHG EAVGVIGPSG TGKSTILKIM AGLLAPDKGE VYIRGKKRAG LISDEEISGL RIGLVFQSAA LFDSLSVREN VGFLLYERSK MSENQISELV
201: TQTLAAVGLK GVENRLPSEL SGGMKKRVAL ARSLIFDTTK EVIEPEVLLY DEPTAGLDPI ASTVVEDLIR SVHMTDEDAV GKPGKIASYL VVTHQHSTIQ
301: RAVDRLLFLY EGKIVWQGMT HEFTTSTNPI VQQFATGSLD GPIRY

Arabidopsis Description

TGD3Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9AT00]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.