Factsheet for HORVU5Hr1G091750.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G369900.1	Wheat	plastid	84.24	91.32
TraesCS5A01G367900.1	Wheat	golgi	86.3	87.66
TraesCS5D01G377300.1	Wheat	cytosol, peroxisome, plastid	87.34	85.57
Os03t0670100-01	Rice	plastid	72.61	79.6
EER96343	Sorghum	plastid	71.06	77.9
GSMUA_Achr1P08960_001	Banana	cytosol, mitochondrion, plastid	58.14	76.01
Zm00001d003145_P001	Maize	mitochondrion	24.55	75.4
Zm00001d019644_P003	Maize	plastid	70.8	72.3
Zm00001d047131_P001	Maize	plastid	26.61	71.03
CDY16404	Canola	plastid	59.95	70.52
Bra022481.1-P	Field mustard	plastid	59.69	70.21
CDY57805	Canola	plastid	59.69	70.21
VIT_04s0023g00290.t01	Wine grape	plastid	59.95	68.04
KRH40333	Soybean	plastid	60.47	67.83
AT1G65410.1	Thale cress	plastid	60.21	67.54
Solyc04g056650.2.1	Tomato	plastid	58.91	65.14
KRH00900	Soybean	plastid	58.66	57.47
CDY39288	Canola	cytosol	25.84	50.51
HORVU7Hr1G098490.2	Barley	plastid	19.64	26.03
HORVU3Hr1G089880.8	Barley	plastid	17.57	25.0
HORVU4Hr1G079940.5	Barley	cytosol	18.35	22.76
HORVU4Hr1G025760.12	Barley	cytosol	6.2	13.95
HORVU3Hr1G030470.1	Barley	cytosol, extracellular, plasma membrane	4.91	11.31
HORVU6Hr1G043820.1	Barley	cytosol, endoplasmic reticulum, plasma membrane	4.39	10.12
HORVU4Hr1G039510.1	Barley	cytosol	4.39	10.12
HORVU1Hr1G075610.7	Barley	extracellular, mitochondrion, plasma membrane	19.12	8.02
HORVU6Hr1G038520.24	Barley	endoplasmic reticulum, plasma membrane	17.83	7.35
HORVU1Hr1G075620.5	Barley	plasma membrane	18.09	7.34
HORVU1Hr1G075640.9	Barley	golgi	17.83	7.05
HORVU4Hr1G087670.8	Barley	mitochondrion	17.31	6.98
HORVU7Hr1G085680.2	Barley	endoplasmic reticulum, peroxisome, plastid	17.57	6.86
HORVU5Hr1G056930.20	Barley	plasma membrane	17.05	6.76

Protein Annotations

Gene3D:3.40.50.300	MapMan:5.8.2.2.3	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150	GO:GO:0009507
GO:GO:0009536	GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:HORVU5Hr1G091750	EnsemblPlants:HORVU5Hr1G091750.1	InterPro:IPR003439
UniProt:M0YCT8	InterPro:P-loop_NTPase	PFAM:PF00005	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR43023
PANTHER:PTHR43023:SF3	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI000294CA06	SEG:seg	:

Description

No Description!

Coordinates

chrchr5H:+:587046085..587051335

Molecular Weight (calculated)

41593.0 Da

IEP (calculated)

8.816

GRAVY (calculated)

-0.183

Length

387 amino acids

Sequence
(BLAST)

001: MRDVGLRRVT HPHPHPQRGG GSQPASLFLL HPPTSATMAS PPTAAAIRHP GVHAGRAPLP RHAGVPYPCS ALPFRLGVLS SRKSRVAVSA TRSPGLGNAG
101: NLREGSNLSK NWDLGRQIGD EHGVLIECRD VHKSFGDKHV LQGVSFKIRH GEAVGIIGPS GTGKSTILKV MAGLLAPDKG EVFICGKKRQ GLVSDEDISG
201: LRIGLVFQSA ALFDSLNVRE NVGFLLYENS NLSEERIGEL VTETLAAVGL KDVEERMPSE LSGGMKKRVA LARSIINDES QETIVPEALL YDEPTAGLDP
301: IASTVVEDLI RSMHVTGKDA LGKPGKIASY AVVTHQHSTI RRAVDRLLFL HEGKIVWEGM TEEFTTSTNP IVQQFASGSL DGPIRYF

Best Arabidopsis Sequence Match ( AT1G65410.1 )
(BLAST)

001: MLSLSCSSSS SSLLPPSLHY HGSSSVQSIV VPRRSLISFR RKVSCCCIAP PQNLDNDATK FDSLTKSGGG MCKERGLEND SDVLIECRDV YKSFGEKHIL
101: KGVSFKIRHG EAVGVIGPSG TGKSTILKIM AGLLAPDKGE VYIRGKKRAG LISDEEISGL RIGLVFQSAA LFDSLSVREN VGFLLYERSK MSENQISELV
201: TQTLAAVGLK GVENRLPSEL SGGMKKRVAL ARSLIFDTTK EVIEPEVLLY DEPTAGLDPI ASTVVEDLIR SVHMTDEDAV GKPGKIASYL VVTHQHSTIQ
301: RAVDRLLFLY EGKIVWQGMT HEFTTSTNPI VQQFATGSLD GPIRY

Arabidopsis Description

TGD3Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9AT00]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.