CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40333	Soybean	plastid	82.53	94.49
VIT_04s0023g00290.t01	Wine grape	plastid	64.3	74.49
CDY16404	Canola	plastid	61.01	73.25
Bra022481.1-P	Field mustard	plastid	60.51	72.64
AT1G65410.1	Thale cress	plastid	63.29	72.46
CDY57805	Canola	plastid	60.25	72.34
GSMUA_Achr1P08960_001	Banana	cytosol, mitochondrion, plastid	54.18	72.3
Zm00001d003145_P001	Maize	mitochondrion	23.04	72.22
Solyc04g056650.2.1	Tomato	plastid	62.28	70.29
EER96343	Sorghum	plastid	59.24	66.29
Os03t0670100-01	Rice	plastid	59.24	66.29
Zm00001d047131_P001	Maize	plastid	24.3	66.21
TraesCS5B01G369900.1	Wheat	plastid	58.23	64.43
Zm00001d019644_P003	Maize	plastid	60.51	63.06
TraesCS5A01G367900.1	Wheat	golgi	57.97	60.1
HORVU5Hr1G091750.1	Barley	plastid	57.47	58.66
TraesCS5D01G377300.1	Wheat	cytosol, peroxisome, plastid	58.23	58.23
CDY39288	Canola	cytosol	26.08	52.02
KRH41857	Soybean	plasma membrane	17.22	26.15
KRG94568	Soybean	mitochondrion	15.95	24.14
KRH54520	Soybean	plasma membrane, plastid	19.24	9.42
KRH03450	Soybean	plasma membrane, plastid	19.24	7.97
KRH56933	Soybean	plasma membrane, plastid	18.99	7.9
KRH63387	Soybean	plasma membrane, plastid	18.23	7.48
KRH54517	Soybean	plasma membrane	18.23	7.45
KRH63384	Soybean	plasma membrane	12.91	7.01
KRG88422	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	8.1	6.52
KRH66908	Soybean	cytosol	16.46	3.56
KRH63056	Soybean	extracellular, plasma membrane, vacuole	0.51	2.35

Protein Annotations

EntrezGene:100783283	Gene3D:3.40.50.300	MapMan:5.8.2.2.3	UniProt:A0A0R0FFI9	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	EMBL:ACUP02011481	EnsemblPlantsGene:GLYMA_18G240700	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	EnsemblPlants:KRH00900
ProteinID:KRH00900	ProteinID:KRH00900.1	InterPro:P-loop_NTPase	PFAM:PF00005	ScanProsite:PS00211	PFscan:PS50893
PANTHER:PTHR43023	PANTHER:PTHR43023:SF3	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI0003DEC11A	:

Description

hypothetical protein

Coordinates

chr18:+:52934180..52940094

Molecular Weight (calculated)

43179.8 Da

IEP (calculated)

7.882

GRAVY (calculated)

-0.125

Length

395 amino acids

Sequence
(BLAST)

001: MVSLSTTPFL PFTAKNASTR IPPPTSFSYS KQRSNRDPRK VVCACIAPPQ NFKSQDSSAI HFNGSSKSEQ LSTARDHEDD SDVLIECRDV YKSFGEKKIL
101: NGVSFKIKHG EAVGIIGPSG TGKSTVLKII AGLLAPDKGE VYIRGKKRVG LVSDDDISGL RIGLVFQSAA LFDSLTVREN VGFLLYEHSS MSEDQISELV
201: TETLAAVGLK GVEDRLPSEL SGGMKKRVAL ARSIICDTTK ESIEPEVLLY DEPTAGLDPI ASTVVEDLIR SVHIKGQDAR GKPGNISSYV VVTHQHSTIK
301: RAIDRLLFLH KGKIVWEGMT HEFTTSTNPI VQQVTRSCAG LSYRRGCSLD PGTNLIQLYW IGFFSVQVET DPIQLNSLHL GALMVLSDIR TVLQF

Best Arabidopsis Sequence Match ( AT1G65410.1 )
(BLAST)

001: MLSLSCSSSS SSLLPPSLHY HGSSSVQSIV VPRRSLISFR RKVSCCCIAP PQNLDNDATK FDSLTKSGGG MCKERGLEND SDVLIECRDV YKSFGEKHIL
101: KGVSFKIRHG EAVGVIGPSG TGKSTILKIM AGLLAPDKGE VYIRGKKRAG LISDEEISGL RIGLVFQSAA LFDSLSVREN VGFLLYERSK MSENQISELV
201: TQTLAAVGLK GVENRLPSEL SGGMKKRVAL ARSLIFDTTK EVIEPEVLLY DEPTAGLDPI ASTVVEDLIR SVHMTDEDAV GKPGKIASYL VVTHQHSTIQ
301: RAVDRLLFLY EGKIVWQGMT HEFTTSTNPI VQQFATGSLD GPIRY

Arabidopsis Description

TGD3Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9AT00]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.