CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol, plasma membrane

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 2
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63056	Soybean	extracellular, plasma membrane, vacuole	15.07	87.06
VIT_12s0055g00730.t01	Wine grape	extracellular	18.13	70.08
KRH54520	Soybean	plasma membrane, plastid	94.7	57.62
CDY23798	Canola	nucleus, peroxisome, plasma membrane	42.97	54.95
CDX68438	Canola	endoplasmic reticulum, extracellular, plasma membrane	38.29	44.13
HORVU3Hr1G030470.1	Barley	cytosol, extracellular, plasma membrane	15.07	44.05
HORVU6Hr1G043820.1	Barley	cytosol, endoplasmic reticulum, plasma membrane	14.87	43.45
HORVU4Hr1G039510.1	Barley	cytosol	14.46	42.26
VIT_17s0000g05860.t01	Wine grape	plasma membrane, plastid	76.99	39.83
KRH56933	Soybean	plasma membrane, plastid	74.75	38.67
CDY02120	Canola	cytosol, nucleus, plasma membrane	51.73	38.54
CDY31786	Canola	cytosol, nucleus, plasma membrane	51.73	38.48
Bra018114.1-P	Field mustard	cytosol, peroxisome, plasma membrane	49.29	38.47
KRH03450	Soybean	plasma membrane, plastid	73.52	37.84
Solyc06g070920.2.1	Tomato	extracellular, plasma membrane	49.08	37.77
CDX77874	Canola	plasma membrane	63.75	37.76
Solyc03g113040.2.1	Tomato	plastid	71.28	37.04
KRH63384	Soybean	plasma membrane	54.79	36.95
Bra012927.1-P	Field mustard	cytosol	45.62	36.42
AT3G47790.1	Thale cress	plasma membrane	66.4	36.18
Solyc03g113060.2.1	Tomato	extracellular	69.04	35.91
VIT_18s0041g02240.t01	Wine grape	plasma membrane	52.55	35.05
AT3G47780.1	Thale cress	plasma membrane	65.38	34.33
Bra018113.1-P	Field mustard	plasma membrane	65.78	34.29
CDY36930	Canola	plasma membrane	65.78	34.29
CDY36932	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	61.51	34.09
CDY24156	Canola	plasma membrane	65.38	34.08
Bra019513.1-P	Field mustard	plasma membrane	61.91	34.04
CDY21797	Canola	plasma membrane	61.71	33.52
TraesCS1A01G343000.1	Wheat	plasma membrane	64.36	33.16
CDX77421	Canola	plasma membrane	63.14	33.16
TraesCS1D01G345200.1	Wheat	plasma membrane	64.15	33.09
CDY39546	Canola	plasma membrane	62.73	32.94
CDX83025	Canola	plasma membrane	63.14	32.91
TraesCS1B01G356200.1	Wheat	plasma membrane	63.75	32.88
Bra033785.1-P	Field mustard	plasma membrane	62.93	32.8
Bra018115.1-P	Field mustard	plasma membrane	61.71	32.72
AT5G61700.1	Thale cress	plasma membrane	60.9	32.61
CDY24158	Canola	plasma membrane	61.1	32.4
AT3G47770.2	Thale cress	endoplasmic reticulum, golgi, plasma membrane, plastid	60.9	32.29
CDX68441	Canola	plasma membrane	61.91	32.27
TraesCS7A01G367700.1	Wheat	plasma membrane	37.27	32.22
Solyc06g070950.1.1	Tomato	plasma membrane	58.45	32.21
Os08t0398300-01	Rice	plasma membrane	62.73	32.18
HORVU1Hr1G075620.5	Barley	plasma membrane	62.53	32.18
KXG25097	Sorghum	plasma membrane	62.73	32.15
AT3G47750.1	Thale cress	mitochondrion, plasma membrane	61.3	32.12
AT3G47740.1	Thale cress	plasma membrane	60.9	32.08
AT3G47760.3	Thale cress	plasma membrane	60.9	31.94
AT5G61740.1	Thale cress	plasma membrane	59.06	31.9
HORVU4Hr1G087670.8	Barley	mitochondrion	62.32	31.88
TraesCS4B01G365000.1	Wheat	plasma membrane	63.14	31.5
Zm00001d050259_P002	Maize	plasma membrane	62.93	31.4
TraesCS5D01G195700.1	Wheat	plasma membrane	60.08	31.18
TraesCSU01G138200.1	Wheat	plasma membrane	63.34	31.16
Bra015049.1-P	Field mustard	plasma membrane	56.62	31.13
TraesCS5A01G193200.1	Wheat	plasma membrane	59.88	31.08
TraesCS5B01G188600.1	Wheat	plasma membrane	59.88	30.95
CDY36931	Canola	plastid	58.66	30.93
OQU89360	Sorghum	plasma membrane	59.47	30.8
CDY24157	Canola	plastid	59.47	30.7
Zm00001d020208_P003	Maize	plasma membrane	59.27	30.7
TraesCS5A01G534100.3	Wheat	cytosol	63.14	30.69
CDY02114	Canola	plasma membrane	55.4	30.67
CDY23039	Canola	plasma membrane	55.19	30.52
CDY62599	Canola	plasma membrane	53.97	30.49
PGSC0003DMT400083071	Potato	plasma membrane	57.43	30.16
HORVU5Hr1G056930.20	Barley	plasma membrane	59.67	29.99
TraesCS3D01G368700.2	Wheat	plasma membrane	57.84	29.34
GSMUA_Achr7P23890_001	Banana	plasma membrane	67.62	28.38
Os06t0589300-01	Rice	plasma membrane	53.56	27.71
TraesCS7D01G355100.1	Wheat	plastid	53.77	27.64
TraesCS7B01G260800.1	Wheat	plastid	53.56	27.51
EER89983	Sorghum	plastid	53.36	27.46
Zm00001d036927_P001	Maize	plasma membrane, plastid	53.97	27.46
HORVU7Hr1G085680.2	Barley	endoplasmic reticulum, peroxisome, plastid	54.18	26.84
GSMUA_Achr3P20510_001	Banana	plasma membrane	62.93	26.34
CDY23043	Canola	cytosol, mitochondrion	25.66	24.61
Bra012931.1-P	Field mustard	cytosol, peroxisome, plasma membrane	28.31	23.48
Bra033786.1-P	Field mustard	cytosol, mitochondrion, nucleus	11.81	19.46
KRH54517	Soybean	plasma membrane	24.03	12.2
KRH63387	Soybean	plasma membrane, plastid	23.83	12.16
Solyc06g070930.2.1	Tomato	plastid	5.7	10.22
KRG94568	Soybean	mitochondrion	5.09	9.58
KRH40333	Soybean	plastid	6.52	9.28
CDX68439	Canola	nucleus	2.85	8.86
KRH41857	Soybean	plasma membrane	4.68	8.85
KRH00900	Soybean	plastid	6.52	8.1
KRH66908	Soybean	cytosol	19.76	5.31
CDX68440	Canola	cytosol, mitochondrion	1.43	5.04
CDX94927	Canola	cytosol	0.0	0.0

Protein Annotations

MapMan:24.1.3.2.1	Gene3D:3.40.50.300	UniProt:A0A0R0E3G0	InterPro:ABCA	InterPro:ABC_transporter-like	EnsemblPlantsGene:GLYMA_U001700
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	EnsemblPlants:KRG88422	ProteinID:KRG88422
ProteinID:KRG88422.1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF12698	PANTHER:PTHR19229	PANTHER:PTHR19229:SF141
SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0006EE0710	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chrscaffold_1118:+:870..5014

Molecular Weight (calculated)

55772.1 Da

IEP (calculated)

8.648

GRAVY (calculated)

0.100

Length

491 amino acids

Sequence
(BLAST)

001: MSGISKQQEV ICAQGLRLWR NSSSEVNNEL YKGYWRSNIE RQINEIAAGY DFLNSNGSIF NVSIWYNSTY KKDTGFNPIA LARIPRSVNL VSNAYLQFLL
101: GPGTKMFFEF VKEMPKPETP IKLDLASLLG GVFFTWVILQ LFPIPLTSLV YEKQQKLRIM MKMHGLDDGP YWMISYGYFL AISIVYMLCF VIFGSVIGLN
201: FFTMNDYSIQ SVFYFIYINL QISLAFLLAS LFSNVKTATV LAYIGMFGTG LLADFPFHFF VQDTSFPRGW IIVMELYPGF ALYRGLYEFS QYAFSGDALG
301: TDGMRWSDLS DSTNGMKEVL IIMFVEWLLV LLFAYYIDQV LSSGCRKSPL FLKRFQKKPH SSFRKPSIQR QKSKVFVQIE KPDVTQEREK VEELLLESTI
401: NQAIVCDNMR KVYPGRDGNP EKLAVRGLSL ALPQGECFGM LGPNGAGKTS FINMMIGLTK PTSGTAYVQG LDLRTHMDGI YTSMGVCPQH E

Best Arabidopsis Sequence Match ( AT3G47760.3 )
(BLAST)

001: MGNHVPAGFF TQANSLFRKN LTYQKRNIWS NVRLIVIPFY LCVLLVGIQV LFDTQVNNSA DNRCGCRCID KNGDGKCGQK SCGLQYSSQN QAFFCAFPNP
101: PPLLPLLHIP RPETRSSDRD RDSCRQTGSC PVTILLTGNN HSLGTTISRN LLSTSFAMNS SDLFLRNLAY NVLGTTSKAD YTNYLDPGIL SDLPIFNVQP
201: RCTPDTTTFS FPFRQSPLEF HKEVRCVEGL NLWRNNSIEI SNEIFKGYRQ GNLEEIINEV AAAYDLMDTD INNFNVTIWY NSTYKGDLRD RRVKYVRVPR
301: SVNLVSNAYL EFLQGSGTKM LFDFVKEMPK QETRLRLEMA SLIGPIFFTW VILLLFPVML TSLVYEKQQH LRIIMKMHGL GDGPYWMITY AYFLAISIVY
401: IICLMIFGSA IGLKFFRFND YSIQFIFYFL CINLQISIAF LVSSAFSKIE TASVAAYLYV FGSGLLGAFL FQFLLEGLSF PRSWIYIMEL YPGFSLYRGL
501: YEFSQYAFKR NLNGSGGMKW KDFNDSAMEE IFYIIIVEWF VALIAAYYTD KISSSGIDPF FFLKNQNPFK KSPSPYGLQR QVSAIAIEME KLDVAHERVK
601: VEQLMLETST GHAIVCDNLK KVYPCRDGNP QKMAVRGLSL AVPSGECFGM LGPNGAGKTS FINMMTGLMK PTSGAAFVHG LDICKDMDIV YTSIGVCPQH
701: DLLWETLTGR EHLLFYGRLK NLKGSDLDQA VEESLKSVNL FRGGVADKPA GKYSGGMKRR LSVAISLIGS PKVVYMDEPS TGLDPASRRS LWTAIKRAKN
801: HTAIILTTHS MEEAEFLCDR LGIFVDGRLQ CVGNPKELKA RYGGSYVLTM TTPSEHEKDV EMLVQDVSPN AKKIYHIAGT QKFEIPKEEV RISEVFQAVE
901: KAKDNFRVFA WGLADTTLED VFIKVARTAQ ASNVFS

Arabidopsis Description

ABCA5ABC transporter A family member 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.