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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX68440 Canola cytosol, mitochondrion 76.47 65.47
CDY23043 Canola cytosol, mitochondrion 82.35 19.14
CDY02120 Canola cytosol, nucleus, plasma membrane 83.19 15.02
CDY31786 Canola cytosol, nucleus, plasma membrane 80.67 14.55
TraesCS7A01G367700.1 Wheat plasma membrane 65.55 13.73
CDX77421 Canola plasma membrane 99.16 12.62
CDY39546 Canola plasma membrane 98.32 12.51
KRH63384 Soybean plasma membrane 76.47 12.5
CDY36932 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 92.44 12.42
Solyc06g070920.2.1 Tomato extracellular, plasma membrane 64.71 12.07
CDY24158 Canola plasma membrane 92.44 11.88
KRH54520 Soybean plasma membrane, plastid 78.15 11.52
CDX83025 Canola plasma membrane 89.92 11.36
CDY36930 Canola plasma membrane 89.92 11.36
CDX68441 Canola plasma membrane 89.92 11.36
CDY62599 Canola plasma membrane 82.35 11.28
CDY24156 Canola plasma membrane 87.39 11.04
CDY36931 Canola plastid 85.71 10.96
CDY24157 Canola plastid 86.55 10.83
CDY23039 Canola plasma membrane 79.83 10.7
CDY02114 Canola plasma membrane 78.99 10.6
CDY21797 Canola plasma membrane 76.47 10.07
Solyc03g113060.2.1 Tomato extracellular 76.47 9.64
Solyc03g113040.2.1 Tomato plastid 73.95 9.31
KRH03450 Soybean plasma membrane, plastid 73.11 9.12
KRH56933 Soybean plasma membrane, plastid 72.27 9.06
TraesCS1B01G356200.1 Wheat plasma membrane 72.27 9.03
TraesCS1D01G345200.1 Wheat plasma membrane 72.27 9.03
TraesCS1A01G343000.1 Wheat plasma membrane 72.27 9.02
HORVU1Hr1G075620.5 Barley plasma membrane 71.43 8.91
Os08t0398300-01 Rice plasma membrane 71.43 8.88
KXG25097 Sorghum plasma membrane 70.59 8.77
HORVU4Hr1G087670.8 Barley mitochondrion 69.75 8.65
Zm00001d050259_P002 Maize plasma membrane 70.59 8.54
TraesCS5B01G188600.1 Wheat plasma membrane 68.07 8.53
TraesCS5D01G195700.1 Wheat plasma membrane 67.23 8.46
OQU89360 Sorghum plasma membrane 67.23 8.44
TraesCS4B01G365000.1 Wheat plasma membrane 69.75 8.43
TraesCSU01G138200.1 Wheat plasma membrane 70.59 8.42
TraesCS5A01G193200.1 Wheat plasma membrane 66.39 8.35
Zm00001d020208_P003 Maize plasma membrane 66.39 8.33
TraesCS5A01G534100.3 Wheat cytosol 70.59 8.32
Solyc06g070950.1.1 Tomato plasma membrane 62.18 8.31
HORVU5Hr1G056930.20 Barley plasma membrane 68.07 8.29
TraesCS7B01G260800.1 Wheat plastid 65.55 8.16
Os06t0589300-01 Rice plasma membrane 64.71 8.11
EER89983 Sorghum plastid 64.71 8.07
TraesCS7D01G355100.1 Wheat plastid 64.71 8.06
Zm00001d036927_P001 Maize plasma membrane, plastid 64.71 7.98
TraesCS3D01G368700.2 Wheat plasma membrane 64.71 7.95
HORVU7Hr1G085680.2 Barley endoplasmic reticulum, peroxisome, plastid 65.55 7.87
GSMUA_Achr7P23890_001 Banana plasma membrane 73.11 7.44
GSMUA_Achr3P20510_001 Banana plasma membrane 72.27 7.33
CDY62594 Canola cytosol 27.73 7.22
CDY64180 Canola plasma membrane 27.73 5.26
CDX68434 Canola plasma membrane 29.41 4.93
CDX96058 Canola cytosol 9.24 4.17
CDY02116 Canola plasma membrane 29.41 4.17
CDY01873 Canola cytosol 9.24 4.17
CDY23800 Canola plasma membrane 31.93 4.15
CDY23042 Canola plasma membrane 31.09 3.95
CDY52820 Canola cytosol, nucleus, plasma membrane 27.73 3.76
CDY02118 Canola plasma membrane 31.09 3.72
CDY23040 Canola plasma membrane 29.41 3.67
CDY24159 Canola golgi, mitochondrion 28.57 3.63
CDY36933 Canola golgi, mitochondrion 28.57 3.52
CDX77874 Canola plasma membrane 24.37 3.5
CDY16404 Canola plastid 9.24 3.34
CDY57805 Canola plastid 9.24 3.34
CDX68436 Canola plasma membrane 7.56 3.06
CDY58413 Canola cytosol, plastid 6.72 2.92
CDX69605 Canola plastid 6.72 2.92
CDY22536 Canola mitochondrion, plasma membrane 29.41 1.89
CDX68438 Canola endoplasmic reticulum, extracellular, plasma membrane 6.72 1.88
CDY35403 Canola mitochondrion, plasma membrane 28.57 1.83
CDY02119 Canola endoplasmic reticulum, plasma membrane, plastid 1.68 1.12
CDY23799 Canola cytosol, peroxisome, plasma membrane 1.68 0.98
CDY23798 Canola nucleus, peroxisome, plasma membrane 2.52 0.78
CDX68439 Canola nucleus 0.84 0.63
CDX68435 Canola mitochondrion, plastid 0.84 0.38
Solyc06g070930.2.1 Tomato plastid 0.84 0.36
CDY02115 Canola extracellular, mitochondrion, plasma membrane, plastid 0.0 0.0
CDY24573 Canola plasma membrane 0.0 0.0
CDY39288 Canola cytosol 0.0 0.0
KRG88422 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 0.0 0.0
CDY62596 Canola cytosol, plasma membrane, vacuole 0.0 0.0
VIT_07s0095g00600.t01 Wine grape extracellular 0.0 0.0
HORVU6Hr1G043820.1 Barley cytosol, endoplasmic reticulum, plasma membrane 0.0 0.0
HORVU3Hr1G030470.1 Barley cytosol, extracellular, plasma membrane 0.0 0.0
HORVU4Hr1G039510.1 Barley cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:CDX94927EnsemblPlantsGene:GSBRNA2T00100406001GO:A0A078E1C9GO:GO:0003674GO:GO:0003824GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0042626GO:GO:0055085InterPro:ABCAPANTHER:PTHR19229PANTHER:PTHR19229:SF127ProteinID:CDX94927
ProteinID:CDX94927.1UniParc:UPI0004EDB788MapMan:24.1.3.2.1:::
Description
BnaC05g07440D
Coordinates
chrLK031886:+:225213..225572
Molecular Weight (calculated)
13292.9 Da
IEP (calculated)
4.976
GRAVY (calculated)
-0.216
Length
119 amino acids
Sequence
(BLAST)
001: MEEAEFLCDR LGIFVDGRLQ CIGNPKELKG RYGGSYVLTM TTASEHEKDV EVLVQDVSPN AKKIYNIAGT QKFEIPKEEV RISEVFQAVE KAKSSFKVFA
101: WGLADTTLED VFIKVARSG
Best Arabidopsis Sequence Match ( AT3G47740.1 )
(BLAST)
001: MADSGPASFW TRANAILRKN LTYQKRNIWS NVRLIMIPFY LCIVLVFIQA LFDSQVNNSL DNQCGCQCID KLGDGKCQMT CGLEYSTRDQ GFFCAIPKPQ
101: PWPPLILIPR PEYRALDANF TNDSCRRKNS CPVTILFTGN NHSLGAVLSR NLLRRPFAMN SSDLLFSLAN NVLATTFKGS ATNYLDAGIV SDGSIYNIQP
201: RCPPNSNFSI SIGQSPLNFT KDMRCVQGLN LWRNNSIEVN LELFEGYHKG NSDGMINEIV AAYDLFDTNM TNFNVNIWFN ATYKDEARNQ PYKVVRVPRL
301: VNWVSNAYLQ YLQGPRTKML FEFVKEMPKP ETKLRLDIAS LIGPIFFTWV ILLLLPVILN SLVYEKQQRL RIIMKMHGLG DGPYWIISYA YFLALSTFYI
401: IFLMIFGSVI GLKFFLLNDF SLQFSFYFVY INLQISIAFL LSSAFSKVET ASVAAYLYVF GSGLLGMFLF QFLLEGLSFP RRWIFVMELY PGFSLYRGLY
501: EFSQNAYQGN LNGKDGMKWK YFSDNAIDEV FYIIIVEWFV ALIATYYIDK MSSSGKDLLF FLKNQNPFKI SHSLQKQVSA ISVEMEKLDV IHESEKVAQL
601: MLESSTSHAI VCDKLRKVYP GRDGNPPKKA VRVLSLAVPS GECFGMLGPN GAGKTSFINM MTGLVKPTSG AAFVQGLDIC KDMDRVYTSM GVCPQHDLLW
701: ETLTGREHLL FYGRLKNLKG VDLNQAVEES LRSVNLFHGG VADKPAGKYS GGMKRRLSVA ISLIGNPKVV YMDEPSTGLD PASRKNLWTV IKNAKRHTAI
801: ILTTHSMEEA EFLCDRLGIF VDGRLQCIGN PKELKGRYGG SYVLTMTTSS EHEKDVEMLV QEVSPNVKKI YHIAGTQKFE IPKDEVRISE VFQVVEKAKS
901: NFKVFAWGLA DTTLEDVFIK VARTAQAFNV FS
Arabidopsis Description
ABCA3ABC transporter A family member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEH6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.