CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 2
endoplasmic reticulum 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	endoplasmic reticulum, plasma membrane, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX94927	Canola	cytosol	11.36	89.92
CDX83025	Canola	plasma membrane	89.17	89.17
CDY24156	Canola	plasma membrane	86.09	86.09
CDY36930	Canola	plasma membrane	85.88	85.88
AT3G47780.1	Thale cress	plasma membrane	82.59	83.21
CDY36932	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	71.02	75.51
CDY02120	Canola	cytosol, nucleus, plasma membrane	52.23	74.66
CDY24158	Canola	plasma membrane	72.93	74.19
CDY31786	Canola	cytosol, nucleus, plasma membrane	51.8	73.94
CDX77421	Canola	plasma membrane	73.35	73.9
CDY39546	Canola	plasma membrane	73.04	73.58
CDY24157	Canola	plastid	71.44	70.77
CDY36931	Canola	plastid	69.85	70.68
CDX68440	Canola	cytosol, mitochondrion	10.3	69.78
CDY02114	Canola	plasma membrane	63.69	67.64
CDY23039	Canola	plasma membrane	63.38	67.23
CDY62599	Canola	plasma membrane	62.0	67.2
KRH54520	Soybean	plasma membrane, plastid	57.32	66.91
CDY23043	Canola	cytosol, mitochondrion	36.09	66.41
CDY24573	Canola	plasma membrane	11.04	65.41
Solyc03g113040.2.1	Tomato	plastid	64.33	64.13
KRH63384	Soybean	plasma membrane	49.26	63.74
CDY21797	Canola	plasma membrane	60.93	63.5
CDY23798	Canola	nucleus, peroxisome, plasma membrane	25.8	63.28
Solyc03g113060.2.1	Tomato	extracellular	62.95	62.82
CDX77874	Canola	plasma membrane	54.78	62.24
KRH56933	Soybean	plasma membrane, plastid	62.63	62.17
KRG88422	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	32.27	61.91
Solyc06g070920.2.1	Tomato	extracellular, plasma membrane	41.93	61.91
KRH03450	Soybean	plasma membrane, plastid	62.42	61.64
TraesCS7A01G367700.1	Wheat	plasma membrane	35.99	59.68
KXG25097	Sorghum	plasma membrane	59.77	58.77
Os08t0398300-01	Rice	plasma membrane	59.34	58.41
TraesCS1D01G345200.1	Wheat	plasma membrane	58.81	58.19
TraesCS1A01G343000.1	Wheat	plasma membrane	58.6	57.92
TraesCS1B01G356200.1	Wheat	plasma membrane	58.28	57.67
HORVU1Hr1G075620.5	Barley	plasma membrane	58.17	57.44
HORVU4Hr1G087670.8	Barley	mitochondrion	58.07	56.98
Zm00001d050259_P002	Maize	plasma membrane	59.02	56.5
TraesCS4B01G365000.1	Wheat	plasma membrane	58.7	56.2
CDX68438	Canola	endoplasmic reticulum, extracellular, plasma membrane	25.37	56.1
TraesCSU01G138200.1	Wheat	plasma membrane	58.6	55.31
TraesCS5D01G195700.1	Wheat	plasma membrane	55.31	55.07
TraesCS5A01G193200.1	Wheat	plasma membrane	55.2	54.97
OQU89360	Sorghum	plasma membrane	55.2	54.85
TraesCS5A01G534100.3	Wheat	cytosol	58.81	54.85
TraesCS3D01G368700.2	Wheat	plasma membrane	56.05	54.55
Zm00001d020208_P003	Maize	plasma membrane	54.35	54.01
Solyc06g070950.1.1	Tomato	plasma membrane	50.64	53.54
TraesCS5B01G188600.1	Wheat	plasma membrane	53.82	53.37
HORVU5Hr1G056930.20	Barley	plasma membrane	55.2	53.22
Os06t0589300-01	Rice	plasma membrane	53.5	53.11
EER89983	Sorghum	plastid	53.5	52.83
TraesCS7D01G355100.1	Wheat	plastid	53.4	52.67
Zm00001d036927_P001	Maize	plasma membrane, plastid	53.72	52.44
TraesCS7B01G260800.1	Wheat	plastid	52.97	52.2
HORVU7Hr1G085680.2	Barley	endoplasmic reticulum, peroxisome, plastid	53.29	50.66
CDX68439	Canola	nucleus	8.39	50.0
GSMUA_Achr7P23890_001	Banana	plasma membrane	60.83	48.97
GSMUA_Achr3P20510_001	Banana	plasma membrane	59.77	48.0
CDY02119	Canola	endoplasmic reticulum, plasma membrane, plastid	8.92	46.93
HORVU3Hr1G030470.1	Barley	cytosol, extracellular, plasma membrane	7.64	42.86
HORVU6Hr1G043820.1	Barley	cytosol, endoplasmic reticulum, plasma membrane	7.54	42.26
Solyc06g070930.2.1	Tomato	plastid	12.0	41.24
HORVU4Hr1G039510.1	Barley	cytosol	7.32	41.07
CDY23799	Canola	cytosol, peroxisome, plasma membrane	8.6	39.71
CDX96058	Canola	cytosol	7.11	25.38
CDY01873	Canola	cytosol	7.01	25.0
CDY62594	Canola	cytosol	12.0	24.73
CDY64180	Canola	plasma membrane	16.45	24.72
CDY16404	Canola	plastid	8.39	24.01
CDY02116	Canola	plasma membrane	21.23	23.81
CDY58413	Canola	cytosol, plastid	6.9	23.72
CDX69605	Canola	plastid	6.9	23.72
CDY57805	Canola	plastid	8.17	23.4
CDY24159	Canola	golgi, mitochondrion	23.04	23.16
CDY23040	Canola	plasma membrane	23.25	22.96
CDY23042	Canola	plasma membrane	22.82	22.95
CDY23800	Canola	plasma membrane	22.08	22.73
CDY36933	Canola	golgi, mitochondrion	23.04	22.49
CDY52820	Canola	cytosol, nucleus, plasma membrane	20.91	22.44
CDX68436	Canola	plasma membrane	6.9	22.11
CDY02118	Canola	plasma membrane	22.93	21.71
CDX68434	Canola	plasma membrane	15.82	20.99
CDY02115	Canola	extracellular, mitochondrion, plasma membrane, plastid	7.54	19.45
CDX68435	Canola	mitochondrion, plastid	4.99	18.01
CDY62596	Canola	cytosol, plasma membrane, vacuole	5.84	17.92
CDY39288	Canola	cytosol	3.5	16.67
CDY35403	Canola	mitochondrion, plasma membrane	20.28	10.27
CDY22536	Canola	mitochondrion, plasma membrane	20.17	10.25

Protein Annotations

MapMan:24.1.3.2.1	Gene3D:3.40.50.300	GO:A0A078BUJ3	InterPro:AAA+_ATPase	InterPro:ABCA	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	EnsemblPlants:CDX68441	ProteinID:CDX68441	ProteinID:CDX68441.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626
GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00125871001	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF12698
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19229	PANTHER:PTHR19229:SF141	SMART:SM00382	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI0004EC0C02	SEG:seg	:	:	:

Description

BnaC01g25190D

Coordinates

chrLK031788:+:1489257..1494552

Molecular Weight (calculated)

105309.0 Da

IEP (calculated)

8.574

GRAVY (calculated)

-0.010

Length

942 amino acids

Sequence
(BLAST)

001: MADPGTASFL TRANALLRKN LTYQKRNIWS NFRLIMIPLY LCVLLVIIQV LVDTQFNNAD ENRCGCQCTV TNQNGKCVNK TCGLEFSTSD QALFCPISSP
101: PRWPPLLQVP RPDSRAVRAS FLPDIGLPDE SCRRTRTCPV TLLFTGNNHS LGASLLGNLL PSSVAVNSTD PLQGLAYNVL GTEIEAGDTN YLDPGISLNL
201: TIYNIQSRCI SNAAFSFSFG EEPLKFKKEL KCAQGLNLWR NNSREVNDMI FKGYRKGNSQ GKTNEIAAAY DLLNTDRNNF NVHIYYNSTY KENSRNTPTT
301: LLRLPRSVNM VSNAFLQLLQ GPGTKMLFEY VKEVPKVETR LRLDIASLIG PLFFTWVILL LFPVILSSLV YEKQERLRII MKMHGLGDGP YWMISYAYFL
401: AMSTLYVICL MIYGSAIGLK FFRLNDYSIQ FTFYFLYVNL QIALCFLVSS IFSKVKTLTV ASYIYVFLSG LVGEFLLEFL IEDPSFSRGW IIVLELFPAF
501: SLYRGLYEFG EFSFQGNLRG ADGMKWKDFS DSAMDHVFLI IIVEWFLALT AAYYIDKMSS SGKGPLFFLK SPINKSPSLR RPSLQRQGSK VVVEMEKTDV
601: TQEIEKVEQL MLEPSTSHAI VCDNLKKVYP GRDGNPPKLA VSGLSLAVPS GECFGMLGPN GAGKTSFINM MTGLLKPTSG TGLVRGLDIC NDMDRVYTSM
701: GVCPQHDLLW ETLTGREHLL FYGRLKNLKG SDLIQAVEES LKSVNLFHGG VADKPAGKYS GGMKRRLSVA ISLIGNPKVV YMDEPSTGLD PASRKNLWTV
801: IKRAKQNTAI ILTTHSMEEA EFLCDRLGIF VDGSLQCIGN PKELKGRYGG SYVFTMTTSS EHEGNVERLI QDVSPNAKKI YHIAGTQKFE LPKEEVRISE
901: VFQAVEKAKS NFTVFAWGLA DTTLEDVFIK VARTGQAFNV FS

Best Arabidopsis Sequence Match ( AT3G47780.1 )
(BLAST)

001: MADPGPASFS TRANALLRKN LTYQKRNLWS NIRLIMIPFY LCILLVIIQI LFDTQVNNSA DNRCGCECIE RNRAGKCQRE LCGLEHSKPD QAFFCSIPRP
101: PLWPPLLQIP RPESRDVRGL RDDSCRRTGS CPVTILFTGN NRSLGTTVSE NLFTSSVSAN ASEILRTLAN NVLGTTVEAD FTNYLDPGIA SNLSIYNIQP
201: RCILNATFPF SFEQPPLKFE KELRCVQGSN LWTNTSKEVN DKIFKGYKKG NPEGKINEIA AAYDLLNTDR NNFNVHIWYN STYKDDAGNR LIKLIRVPRS
301: VNLVSNAYLQ FLQGPGTRML FEYVKEMPKP ETSLRLDIAS LIGPLFFTWV ILLLFPVILS SLVYEKQQHL RIIMKMHGLG DGPYWMISYA YFLTISVLYV
401: ICLMIFGSAI GLKFFRLNSY SIQFVFYFLY LNLQIALAFL VSSVFSKVKT STVASYIYVF GSGLLGLFLL NFLIEDSSFP RGWIIVMELY PGFSLYRGLY
501: ELAQFAFRGN LRGEDGMKWK DFGDSAMDDV FYIIVVEWFL ALIAAYYIDK ISSSGRNPLF FLQNPFKKSP SLRRPSLQRQ GSKVSVDMEK PDVTHESKKV
601: ERLMLESSTS HAIVCDNLKK VYPGRDGNPP KLAVRGLSLA VPSGECFGML GPNGAGKTSF INMMTGLLKP TSGTALVQGL DICNDMDRVY TSMGVCPQHD
701: LLWETLTGRE HLLFYGRLKN LKGADLNQAV EESLKSVNLF HGGVADKPAG KYSGGMKRRL SVAISLIGNP KVVYMDEPST GLDPASRKNL WTVIKRAKQN
801: TAIILTTHSM EEAEFLCDRL GIFVDGGLQC IGNPKELKGR YGGSYVFTMT TSSEHEQNVE KLIKDVSPNA KKIYHIAGTQ KFELPKEEVR ISEVFQAVEK
901: AKSNFTVFAW GLADTTLEDV FIKVVRNGQA FNVFS

Arabidopsis Description

ABCA7ABC transporter A family member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.