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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, mitochondrion, plastid, plasma membrane, golgi

Predictor Summary:
  • plastid 3
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 2
  • golgi 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid
Any Predictor:endoplasmic reticulum, golgi, mitochondrion, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Predotar:plastid
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra018115.1-P Field mustard plasma membrane 99.55 95.25
CDX94927 Canola cytosol 12.42 92.44
CDY24158 Canola plasma membrane 96.39 92.22
AT3G47750.1 Thale cress mitochondrion, plasma membrane 79.46 75.13
AT3G47760.3 Thale cress plasma membrane 79.12 74.89
CDY02120 Canola cytosol, nucleus, plasma membrane 54.74 73.6
CDX68440 Canola cytosol, mitochondrion 11.51 73.38
CDY31786 Canola cytosol, nucleus, plasma membrane 54.29 72.88
CDY36930 Canola plasma membrane 77.09 72.51
CDX77421 Canola plasma membrane 76.41 72.41
CDY24156 Canola plasma membrane 76.75 72.19
CDY39546 Canola plasma membrane 75.96 71.98
CDY36931 Canola plastid 75.06 71.43
CDY24157 Canola plastid 76.52 71.29
CDX68441 Canola plasma membrane 75.51 71.02
CDX83025 Canola plasma membrane 74.94 70.49
KRH54520 Soybean plasma membrane, plastid 59.71 65.55
CDY23043 Canola cytosol, mitochondrion 37.81 65.43
CDY62599 Canola plasma membrane 62.42 63.64
CDY24573 Canola plasma membrane 11.29 62.89
CDY02114 Canola plasma membrane 62.42 62.34
CDY23039 Canola plasma membrane 62.42 62.27
Solyc06g070920.2.1 Tomato extracellular, plasma membrane 44.81 62.23
KRG88422 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 34.09 61.51
CDY23798 Canola nucleus, peroxisome, plasma membrane 26.52 61.2
CDY21797 Canola plasma membrane 62.42 61.17
Solyc03g113040.2.1 Tomato plastid 64.9 60.85
KRH63384 Soybean plasma membrane 49.77 60.58
CDX77874 Canola plasma membrane 56.09 59.95
TraesCS7A01G367700.1 Wheat plasma membrane 38.15 59.51
Solyc03g113060.2.1 Tomato extracellular 62.75 58.9
KRH56933 Soybean plasma membrane, plastid 61.51 57.43
KRH03450 Soybean plasma membrane, plastid 61.4 57.02
CDX68438 Canola endoplasmic reticulum, extracellular, plasma membrane 27.2 56.57
TraesCS1A01G343000.1 Wheat plasma membrane 58.01 53.93
TraesCS1D01G345200.1 Wheat plasma membrane 57.79 53.78
TraesCS1B01G356200.1 Wheat plasma membrane 57.67 53.68
KXG25097 Sorghum plasma membrane 57.9 53.55
Os08t0398300-01 Rice plasma membrane 57.79 53.5
HORVU4Hr1G087670.8 Barley mitochondrion 56.88 52.5
HORVU1Hr1G075620.5 Barley plasma membrane 56.09 52.1
TraesCS5D01G195700.1 Wheat plasma membrane 55.42 51.9
TraesCS5A01G193200.1 Wheat plasma membrane 55.19 51.69
OQU89360 Sorghum plasma membrane 55.3 51.69
Zm00001d020208_P003 Maize plasma membrane 55.19 51.58
Zm00001d050259_P002 Maize plasma membrane 57.22 51.52
TraesCS4B01G365000.1 Wheat plasma membrane 56.88 51.22
Solyc06g070950.1.1 Tomato plasma membrane 51.47 51.18
TraesCS7D01G355100.1 Wheat plastid 54.63 50.68
TraesCS7B01G260800.1 Wheat plastid 54.29 50.31
TraesCSU01G138200.1 Wheat plasma membrane 56.66 50.3
TraesCS5B01G188600.1 Wheat plasma membrane 53.84 50.21
HORVU5Hr1G056930.20 Barley plasma membrane 55.3 50.15
TraesCS5A01G534100.3 Wheat cytosol 57.11 50.1
Os06t0589300-01 Rice plasma membrane 53.61 50.05
EER89983 Sorghum plastid 53.84 50.0
CDX68439 Canola nucleus 8.92 50.0
TraesCS3D01G368700.2 Wheat plasma membrane 54.4 49.79
Zm00001d036927_P001 Maize plasma membrane, plastid 54.18 49.74
HORVU7Hr1G085680.2 Barley endoplasmic reticulum, peroxisome, plastid 54.51 48.74
GSMUA_Achr7P23890_001 Banana plasma membrane 60.38 45.73
GSMUA_Achr3P20510_001 Banana plasma membrane 58.47 44.16
HORVU6Hr1G043820.1 Barley cytosol, endoplasmic reticulum, plasma membrane 7.79 41.07
HORVU3Hr1G030470.1 Barley cytosol, extracellular, plasma membrane 7.67 40.48
HORVU4Hr1G039510.1 Barley cytosol 7.45 39.29
CDY02119 Canola endoplasmic reticulum, plasma membrane, plastid 7.9 39.11
CDY23799 Canola cytosol, peroxisome, plasma membrane 7.9 34.31
Solyc06g070930.2.1 Tomato plastid 9.93 32.12
CDY64180 Canola plasma membrane 17.83 25.2
CDX96058 Canola cytosol 7.45 25.0
CDY62594 Canola cytosol 12.75 24.73
CDY01873 Canola cytosol 7.34 24.62
CDY16404 Canola plastid 9.03 24.32
CDY24159 Canola golgi, mitochondrion 25.39 24.01
CDY02116 Canola plasma membrane 22.57 23.81
CDX69605 Canola plastid 7.34 23.72
CDY58413 Canola cytosol, plastid 7.34 23.72
CDY57805 Canola plastid 8.8 23.71
CDY36933 Canola golgi, mitochondrion 25.39 23.32
CDY23040 Canola plasma membrane 24.94 23.17
CDX68436 Canola plasma membrane 7.67 23.13
CDY23800 Canola plasma membrane 23.59 22.84
CDY23042 Canola plasma membrane 24.15 22.84
CDY52820 Canola cytosol, nucleus, plasma membrane 22.46 22.67
CDX68434 Canola plasma membrane 17.27 21.55
CDY02118 Canola plasma membrane 24.15 21.51
CDY02115 Canola extracellular, mitochondrion, plasma membrane, plastid 7.9 19.18
CDY62596 Canola cytosol, plasma membrane, vacuole 6.21 17.92
CDX68435 Canola mitochondrion, plastid 5.19 17.62
CDY39288 Canola cytosol 3.72 16.67
CDY22536 Canola mitochondrion, plasma membrane 20.88 9.98
CDY35403 Canola mitochondrion, plasma membrane 20.77 9.89
Protein Annotations
MapMan:24.1.3.2.1Gene3D:3.40.50.300GO:A0A078HGH6UniProt:A0A078HGH6InterPro:AAA+_ATPaseInterPro:ABCA
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDY36932ProteinID:CDY36932ProteinID:CDY36932.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887
GO:GO:0042626GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00063074001InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005
PFAM:PF12698ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19229PANTHER:PTHR19229:SF141SMART:SM00382
SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0004EF44A9SEG:seg::
Description
BnaA06g17170DBnaA06g17170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HGH6]
Coordinates
chrLK032387:-:213062..217194
Molecular Weight (calculated)
100020.0 Da
IEP (calculated)
8.916
GRAVY (calculated)
-0.057
Length
886 amino acids
Sequence
(BLAST)
001: MADLVPASFL TQANALSRKN LAYQRRNLWS NVRLIVIPLY LCVLLVSIQA LFDTQVNNSP DNQCGCQCID DKNRDGICDK NSCGLEYSSQ KQALFCAFPS
101: PPPLPPFLQI PRPKNPSDSC RRLNGSCPGT TSEPDFTNYF DPGIHSNLPI FNIQTQCTPR TTFSFSFGQS PQKFQKVEVR CVQGLSLWRN NSIDVTHDIL
201: KRYQKGNHEE VINEVAAAYD LLDTDRNKFN VTIWYNSTSK TKLLERRVKL VRVPRSVNLI SNAYLQYLKG PGTKILFEFV KEMPKVETWL HVDVASSIGP
301: IFFTWVILLL FPVVLNTLVY EKQQRLRIIM KMHGLGDGPY WMISYAYFLS ISTLYVICLL IFGSVIGRLK FFRLNNYSIQ FLFYFIYINL QISIAFLVSS
401: AFSKVKTSSV AAYIYVFGSG LLGAFLFQFL MEDPSFPRRW IFFMEVYPGF SLYCGLYEFS EYALNKKDGM KWDDFSNSGM DEVFYIIIIE WFVSLIAAYY
501: IDKISSSGKD PLFFLKNPFK FLPRPSLQKQ GSAVSVEMEK LDVAQEREKV DQLMMLEPTT RYAIVCDNLK KMYPGRDGNQ PKIAVHGLSL AVPSGECFGM
601: LGPNGAGKTS FINMMTGLVK PTSGTAFVRG LDICKDMDRA YTSMGVCPQH DLLWETLTGR EHLLFYGRLK NLKGSDLNQA VEESLKSVNL SRGGVGDKPA
701: GKYSGGMKRR LSVAISLIGC PKVVYMDEPS TGLDPASRMN LWTVIKRAKT NTAIILTTHS MEEAEFLCDR LGIFVDGRLQ CIGNPKELKG RYGGSYVFTM
801: TTSSEHEKDV EMLVKDVSPN AKKIYHIGGT QKFEIPKGEV RISEVFQAVE KAKSSFKVFA WGLADTTLED VFIKVARTAQ AFNVLS
Best Arabidopsis Sequence Match ( AT3G47760.1 )
(BLAST)
001: MGNHVPAGFF TQANSLFRKN LTYQKRNIWS NVRLIVIPFY LCVLLVGIQV LFDTQVNNSA DNRCGCRCID KNGDGKCGQK SCGLQYSSQN QAFFCAFPNP
101: PPLLPLLHIP RPETRSSDRD RDSCRQTGSC PVTILLTGNN HSLGTNYTNY LDPGILSDLP IFNVQPRCTP DTTTFSFPFR QSPLEFHKEV RCVEGLNLWR
201: NNSIEISNEI FKGYRQGNLE EIINEVAAAY DLMDTDINNF NVTIWYNSTY KGDLRDRRVK YVRVPRSVNL VSNAYLEFLQ GSGTKMLFDF VKEMPKQETR
301: LRLEMASLIG PIFFTWVILL LFPVMLTSLV YEKQQHLRII MKMHGLGDGP YWMITYAYFL AISIVYIICL MIFGSAIGLK FFRFNDYSIQ FIFYFLCINL
401: QISIAFLVSS AFSKIETASV AAYLYVFGSG LLGAFLFQFL LEGLSFPRSW IYIMELYPGF SLYRGLYEFS QYAFKRNLNG SGGMKWKDFN DSAMEEIFYI
501: IIVEWFVALI AAYYTDKISS SGIDPFFFLK NQNPFKKSPS PYGLQRQVSA IAIEMEKLDV AHELMLETST GHAIVCDNLK KVYPCRDGNP QKMAVRGLSL
601: AVPSGECFGM LGPNGAGKTS FINMMTGLMK PTSGAAFVHG LDICKDMDIV YTSIGVCPQH DLLWETLTGR EHLLFYGRLK NLKGSDLDQA VEESLKSVNL
701: FRGGVADKPA GKYSGGMKRR LSVAISLIGS PKVVYMDEPS TGLDPASRRS LWTAIKRAKN HTAIILTTHS MEEAEFLCDR LGIFVDGRLQ CVGNPKELKA
801: RYGGSYVLTM TTPSEHEKDV EMLVQDVSPN AKKIYHIAGT QKFEIPKEEV RISEVFQAVE KAKDNFRVFA WGLADTTLED VFIKVARTAQ ASNVFS
Arabidopsis Description
ABCA5ABC transporter A family member 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.