CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 3
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012930.1-P	Field mustard	plasma membrane	90.25	98.9
CDY23042	Canola	plasma membrane	92.66	98.4
CDY23800	Canola	plasma membrane	85.43	92.9
AT5G61690.2	Thale cress	plasma membrane	83.22	86.88
CDY02115	Canola	extracellular, mitochondrion, plasma membrane, plastid	30.15	82.19
CDY23040	Canola	plasma membrane	77.49	80.82
CDY02116	Canola	plasma membrane	67.64	80.12
CDY64180	Canola	plasma membrane	49.65	78.79
CDY52820	Canola	cytosol, nucleus, plasma membrane	68.64	77.79
CDY62596	Canola	cytosol, plasma membrane, vacuole	23.82	77.2
CDY62594	Canola	cytosol	35.08	76.37
CDY24159	Canola	golgi, mitochondrion	68.14	72.36
CDY36933	Canola	golgi, mitochondrion	69.05	71.19
CDX68435	Canola	mitochondrion, plastid	18.59	70.88
GSMUA_Achr3P20540_001	Banana	cytosol, extracellular, nucleus	11.36	66.47
VIT_17s0000g05850.t01	Wine grape	plasma membrane	63.12	65.55
CDX68434	Canola	plasma membrane	45.83	64.23
GSMUA_Achr7P23880_001	Banana	plasma membrane	60.7	63.05
PGSC0003DMT400046727	Potato	plasma membrane	58.99	62.85
KRH54517	Soybean	plasma membrane	60.9	62.67
TraesCS1B01G356100.2	Wheat	plasma membrane	59.9	61.83
TraesCS1D01G345100.2	Wheat	mitochondrion, plasma membrane, plastid	59.8	61.66
TraesCS1A01G342900.2	Wheat	plasma membrane	59.8	61.59
EES14950	Sorghum	mitochondrion, plasma membrane, plastid	59.3	61.39
Os08t0398000-01	Rice	plasma membrane	59.4	61.05
KRH63387	Soybean	plasma membrane, plastid	58.79	60.81
Zm00001d032279_P005	Maize	golgi, plastid	58.79	60.31
HORVU1Hr1G075640.9	Barley	golgi	59.1	60.06
GSMUA_Achr3P20560_001	Banana	plastid	16.68	57.84
Solyc06g070960.1.1	Tomato	plasma membrane	52.66	56.59
CDX94927	Canola	cytosol	3.72	31.09
CDY02120	Canola	cytosol, nucleus, plasma membrane	19.5	29.44
CDY31786	Canola	cytosol, nucleus, plasma membrane	19.3	29.09
CDX68439	Canola	nucleus	4.52	28.48
CDY23043	Canola	cytosol, mitochondrion	14.57	28.32
CDX77874	Canola	plasma membrane	21.31	25.57
CDY24573	Canola	plasma membrane	4.02	25.16
CDY21797	Canola	plasma membrane	22.61	24.89
CDY62599	Canola	plasma membrane	21.11	24.17
CDY36932	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	21.51	24.15
CDY02114	Canola	plasma membrane	21.51	24.13
CDY23039	Canola	plasma membrane	21.41	23.99
CDY23798	Canola	nucleus, peroxisome, plasma membrane	9.25	23.96
CDY36930	Canola	plasma membrane	22.61	23.89
CDY36931	Canola	plastid	22.31	23.85
CDY24157	Canola	plastid	22.71	23.76
CDX68440	Canola	cytosol, mitochondrion	3.32	23.74
CDX83025	Canola	plasma membrane	22.41	23.67
CDY24156	Canola	plasma membrane	22.31	23.57
CDY24158	Canola	plasma membrane	21.71	23.33
CDY39546	Canola	plasma membrane	21.91	23.32
CDX77421	Canola	plasma membrane	21.81	23.21
CDX68441	Canola	plasma membrane	21.71	22.93
CDX68438	Canola	endoplasmic reticulum, extracellular, plasma membrane	9.75	22.77
CDY16404	Canola	plastid	7.04	21.28
CDY58413	Canola	cytosol, plastid	5.83	21.17
CDY57805	Canola	plastid	6.93	20.97
CDX69605	Canola	plastid	5.73	20.8
CDY01873	Canola	cytosol	4.92	18.56
CDX96058	Canola	cytosol	4.82	18.18
CDX68436	Canola	plasma membrane	4.72	15.99
CDY39288	Canola	cytosol	2.71	13.64
CDY22536	Canola	mitochondrion, plasma membrane	25.23	13.55
CDY35403	Canola	mitochondrion, plasma membrane	25.23	13.49
CDY02119	Canola	endoplasmic reticulum, plasma membrane, plastid	2.21	12.29
CDY23799	Canola	cytosol, peroxisome, plasma membrane	2.31	11.27

Protein Annotations

MapMan:24.1.3.2.1	Gene3D:3.40.50.300	MapMan:5.8.5	GO:A0A078ERG8	InterPro:ABCA	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	EnsemblPlants:CDY02118	ProteinID:CDY02118	ProteinID:CDY02118.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626
GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00113510001	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF12698
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19229	PANTHER:PTHR19229:SF193	SUPFAM:SSF52540	TMHMM:TMhelix
UniParc:UPI0004EDF0FB	SEG:seg	:	:	:	:

Description

BnaA03g40490D

Coordinates

chrLK031932:-:232614..237781

Molecular Weight (calculated)

110146.0 Da

IEP (calculated)

8.783

GRAVY (calculated)

0.049

Length

995 amino acids

Sequence
(BLAST)

001: MILQQGLPLL YQQFTALFKK NLLLSWRNKR STCLQLFSSF FFILVIFCIE EAMKASEASS SAYKNVTDPM LLFSPPILPC EDKFFVKLPC YDFVWSGNNS
101: RRVTDIVSAI MANNPGRPIP TNKVQSFKGP EEVDAWFMSH PLQVPGALHF AERNATVVSY GVQTNSSSEE KRGRIEDPTF KFLIPLQIAA EREIARSLIG
201: DPKFGWSFGF KEFARPAIIG EAISALKVMG PIFFLAFSMF GFVLQLGSLV TEKELKLRQA MTMMGVFDTA YWLSWLIWEG LLTFVSSLFL VLFGMIFQFD
301: FFLKNSFFVV FLLFLLFQFN MISLAFVLSS FISKSSSATT VGFLVFLISF ILQIVSATGF PYSSAYSASR RAIWSLFPPN TFSAGLKLLL DATSTPESSG
401: ISWSERAVCE GGMSTCVISV DIIYQWQVGS FLFWFVLAMY FDNIIPNASG VRKPIFYFLT PGYWTGKGGN KMEVPPVEHV ASEDQDVLEE ETLVKQQAMD
501: GIVDPNIAVQ IHGLAKTYPG TTKLGCCKCT KTSPFHAVKG LWMNIAKDQL FCMLGPNGAG KTTSISCLTG INPITGGDAL IYGDSVRSSV GMSNIRKMIG
601: VCPQFDILWD ALSSEEHLHL FASIKGLPPP SINSTAEKLL ADVKLTGAAK VRAGSYSGGM KRRLSVAVAL IGDPKLTTGM DPITRRHVWD IIQESKKGRA
701: IILTTHSMEE ADILSDRIGI MAKGRLRCIG TSIRLKSRFG TGFVATVSFT ESKKDNSNAS GDSHEPVKRF FNEHLKVEPA DENKAFMTFV IPHDKEKLLT
801: GFFEELENRE SEFGISDIQL GLATLEEVFL NIARRAELEN ATTEGIMVTL DLVSGISLEI PVGARFVGIP DTESAENPSG VMVEVYWQQD GSGSMCITGH
901: SSEMRVPQNV LVTRPPSPNA LGHKGLRQAV RGRKEPMSVA SNRARKLRSR GPGDRGAVTE VAEQLHTEIT KSTHYKGRRR DMKKGTLKPL KRATH

Best Arabidopsis Sequence Match ( AT5G61690.2 )
(BLAST)

001: MILQEGLPLL YQQFTALFGK NLLLSWRNKR ATCLQIFSSF FFILLIFCIE EAMKASDASS SAYKNITDPT LLVSPPILPC EDKFFVKLPC YDFVWSGNNS
101: RRVTDIVSAI MANNPGRPIP TNKVQSFKEP DEVDTWLLSH PLQVPGALHF VERNASVISY GVQTNSSSES KRGQTEDPTF KFLVPLQVAA EREIARSLLG
201: DPNFGWGLGF KEFARPAIIT ETTSALSVMG PVFFLAFSMF GFVLQLGALV TEKELKLRQA MTMMGVYDSA YWLSWLTWEG ILTLVSSLFL VLFGMIFRFD
301: FFLKNSFVLV FLLFLLFQFN MIGLAFALSS IISKSSSATT VGFLVFLIGF ITQFVSATGF PYSSSYAVSR RVMWSLFPPN TFSAGLKLLL DATSTPKSSG
401: ISWSNRAVCE GGQATCVISI NIIYQWLLGT FLFWFVLAIY FDNIIPNASG VRKPIFYFLA PGYWTGKGGN KVEEGSIFSC VGSVPLVEHN TPNDKDVLEE
501: ETEVKQQAMD GIADPNIAVQ IHGLAKTYPG TTKLGCCKCT KTSPFHAVKG LWMNIAKDQL FCLLGPNGAG KTTTISCLTG INPVTGGDAL IYGDSIRSSV
601: GISNIRKMIG VCPQFDILWD ALSSEQHLHL FASIKGLPPA SIKSTAEKLL ADVKLTGAAK VRAGSYSGGM KRRLSVAVAL IGDPKLVFLD EPTTGMDPIT
701: RRHVWDIIQE SKKGRAIILT THSMEEADIL SDRIGIMAKG RLRCIGTSIR LKSRFGTGFV ATVSFIENKN DNNIGVGASH EPLKKFFKEH LKVEPTEENK
801: AFMTFVIPHD KENLLTGFFE ELQNRESEFG ISDIQLGLAT LEEVFLNIAR QAELESATAE GNMVTLELAS GISLEIPVGA RFVGIPDTEN AENPSGVMVE
901: VYWQQDGSGS MCISGHSSEM RVPQNVPVTR PPSPNALGHK SLRQGVRGIV IDL

Arabidopsis Description

ABCA11ABC transporter A family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKF2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.