Factsheet for GSMUA_Achr3P20560_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 3
cytosol 1
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY62594	Canola	cytosol	52.26	32.82
GSMUA_AchrUn_...	Banana	cytosol	11.5	27.5
CDY64180	Canola	plasma membrane	55.4	25.36
GSMUA_Achr7P23880_001	Banana	plasma membrane	78.05	23.38
CDX68434	Canola	plasma membrane	56.1	22.68
Os08t0398000-01	Rice	plasma membrane	70.38	20.87
TraesCS1D01G345100.2	Wheat	mitochondrion, plasma membrane, plastid	69.34	20.62
TraesCS1B01G356100.2	Wheat	plasma membrane	68.99	20.54
TraesCS1A01G342900.2	Wheat	plasma membrane	68.99	20.5
HORVU1Hr1G075640.9	Barley	golgi	69.69	20.43
EES14950	Sorghum	mitochondrion, plasma membrane, plastid	67.94	20.29
CDY02116	Canola	plasma membrane	58.19	19.88
Zm00001d032279_P005	Maize	golgi, plastid	66.9	19.79
VIT_17s0000g05850.t01	Wine grape	plasma membrane	64.46	19.31
PGSC0003DMT400046727	Potato	plasma membrane	62.72	19.27
KRH54517	Soybean	plasma membrane	63.76	18.92
KRH63387	Soybean	plasma membrane, plastid	63.07	18.82
CDY52820	Canola	cytosol, nucleus, plasma membrane	57.14	18.68
AT5G61730.2	Thale cress	plasma membrane, plastid	60.98	18.42
AT5G61690.2	Thale cress	plasma membrane	60.98	18.36
CDY23800	Canola	plasma membrane	58.19	18.25
CDY24159	Canola	golgi, mitochondrion	59.58	18.25
CDY36933	Canola	golgi, mitochondrion	61.32	18.24
Bra012930.1-P	Field mustard	plasma membrane	57.14	18.06
Bra018116.1-P	Field mustard	golgi, mitochondrion	61.32	17.85
CDY23042	Canola	plasma membrane	58.19	17.82
CDY23040	Canola	plasma membrane	59.23	17.82
AT3G47730.1	Thale cress	mitochondrion, plasma membrane	60.28	17.6
CDY02118	Canola	plasma membrane	57.84	16.68
Solyc06g070960.1.1	Tomato	plasma membrane	53.66	16.63
Bra012928.1-P	Field mustard	plasma membrane	52.61	16.29
GSMUA_Achr1P08960_001	Banana	cytosol, mitochondrion, plastid	6.97	6.76
GSMUA_Achr8P05670_001	Banana	plasma membrane	17.77	5.43
GSMUA_Achr3P20510_001	Banana	plasma membrane	20.21	4.94
GSMUA_Achr1P13520_001	Banana	plastid	5.23	4.79
GSMUA_Achr7P23890_001	Banana	plasma membrane	19.51	4.79
GSMUA_AchrUn_...	Banana	extracellular, golgi, plasma membrane	18.12	4.58
GSMUA_Achr7P19550_001	Banana	endoplasmic reticulum, extracellular, vacuole	4.88	4.52
GSMUA_Achr3P20540_001	Banana	cytosol, extracellular, nucleus	1.74	2.94
CDX68435	Canola	mitochondrion, plastid	1.39	1.53
GSMUA_AchrUn_...	Banana	mitochondrion	1.74	1.36
CDY62596	Canola	cytosol, plasma membrane, vacuole	1.39	1.3
GSMUA_AchrUn_...	Banana	extracellular	0.7	0.59
GSMUA_Achr3P20520_001	Banana	plasma membrane, plastid	1.05	0.49

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	InterPro:ABCA	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0042626	GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr3G20560_001	EnsemblPlants:GSMUA_Achr3P20560_001	EnsemblPlants:GSMUA_Achr3T20560_001	UniProt:M0SGC2
InterPro:P-loop_NTPase	PANTHER:PTHR19229	PANTHER:PTHR19229:SF193	SUPFAM:SSF52540	UniParc:UPI0002958CB5	SEG:seg

Description

ABC transporter A family member 2 [Source:GMGC_GENE;Acc:GSMUA_Achr3G20560_001]

Coordinates

chr3:+:21669033..21673352

Molecular Weight (calculated)

32045.1 Da

IEP (calculated)

5.916

GRAVY (calculated)

-0.244

Length

287 amino acids

Sequence
(BLAST)

001: MDSAFYSSIV LVPKSNYWSS STTGMDPITR RRVWDIIEDA KRGRAIVLTT HSMEEADILS DRIAIMAKGK LRCIGTSIRL KSRFGTGYVA NISFLGNTPG
101: QTHNVYGSTP VYNPHLQLVK QFFKDRLHVE PKEENKTFFT FTIPHNREEL LANFFAELQD REKEFGILDT QLGLTTLEEV FLNIAQLAEL ESSSSEESLV
201: TLNLLSGSSI QIPKGARFVG IPGTESSEHP RGLMVEVYWG QDDTGTLCIS GHSPETDVPR NVRLTVNQAR SRIGLYDVPV GFVIDSN

Best Arabidopsis Sequence Match ( AT3G47730.1 )
(BLAST)

001: MTLQRGLPLL LQQYTALFKK NLLLSWRSKR ATFLQLFASF FFILLIFCIQ AAMEKSFASS TALKTVTDPT ALISPPIPPC EDKFFVNLPC YDFVWSGNRS
101: SKVTQIVNAI MKNNPGRSIP IEKVRSFVDP EAVDTWLMAN PLLVPGALHF IERNATVISY GIQTNSTPEM NRGRFEDPTF KFQIPLQIAA EREIARSLIG
201: DPNFNWVVGF KEFPHPTIEA IVALDTIGPT FFLAVAMFGF VLQISSLITE KELKLRQAMT MMGVFDTAYW LSWLTWEGIL TAISALLTVL FGMMFQFDFF
301: LKNSFPVVFL LFMLFQFNLI GLAFMLSAFI SKSTSATTVG FFVFLVGFVT QLATSSGFPY AKKYSRMIRA LWSLFPPNTF SQGLKLLADA TSTPQDPGIS
401: WSKRAECGPN DDTGCVLTIN DIYLWLLGTF FLWFVLALYF DNITPNASGV RKSIFYFLKP GYWTGKGGNR VEEGGICSCI GSVPPVDHIT PDDEDVLEEE
501: TLVKQHSMEG LVDPNVAVQI RGLAKTYPGT TKFGCCKCKK TSPFHALKGL WMNIAKDQLF CLLGPNGAGK TTTINCLTGL FPVTGGDALI YGNSIRSSVG
601: MSNIRKMIGV CPQFDILWDA LSGEEHLKLF ASIKGLPPSS INSMVEKSLA EVKLTEAGKI RAGSYSGGMK RRLSVAVSLI GDPKLVFLDE PTTGMDPITR
701: RHVWDIIQET KKGRAIILTT HSMEEADILS DRIGIMAKGR LRCIGTSIRL KSRFGTGFIA NISFVESNNH NGEAGSDSRE PVKKFFKDHL KVKPIEENKA
801: FMTFVIPHDK ENLLTSFFAE LQDREEEFGI SDIQLGLATL EEVFLNIARK AELESAAVDG TMVTLDLTSG SSVEIPVGAR FIGIPGTETA ENPRGVMVEV
901: YWQQDESGSL CISGHSTEMP IPENIPVTDP VAPGHGGVNL LGRRGRRQVQ GIVIDPEFAT FTRSGSTSSR RFSRSGSSRR FSS

Arabidopsis Description

ABCA2ATH1 [Source:UniProtKB/TrEMBL;Acc:A0A178V6R6]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.