Factsheet for GSMUA_Achr1P13520_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G399500.1	Wheat	plastid	60.06	70.41
KXG28389	Sorghum	plastid	61.02	70.22
HORVU3Hr1G089880.8	Barley	plastid	59.42	68.38
TraesCS3D01G393600.2	Wheat	plastid	59.74	67.75
TraesCS3B01G432400.1	Wheat	plastid	59.11	67.52
Solyc02g068180.2.1	Tomato	plastid	58.15	66.42
KRG94568	Soybean	mitochondrion	53.99	64.75
VIT_14s0068g01730.t01	Wine grape	plastid	58.47	64.44
Os11t0490800-02	Rice	plastid	59.42	64.36
Bra008779.1-P	Field mustard	plastid	55.59	63.5
AT5G14100.1	Thale cress	plastid	56.23	63.31
CDX69605	Canola	plastid	55.27	63.14
CDY58413	Canola	cytosol, plastid	54.63	62.41
Zm00001d007328_P003	Maize	plastid	56.55	58.42
TraesCS3A01G399400.1	Wheat	cytosol	32.59	40.32
GSMUA_AchrUn_...	Banana	cytosol	10.54	27.5
GSMUA_Achr7P19550_001	Banana	endoplasmic reticulum, extracellular, vacuole	23.0	23.23
GSMUA_Achr1P08960_001	Banana	cytosol, mitochondrion, plastid	20.77	21.96
GSMUA_Achr3P20540_001	Banana	cytosol, extracellular, nucleus	11.82	21.76
GSMUA_AchrUn_...	Banana	extracellular	7.99	7.42
GSMUA_Achr8P05670_001	Banana	plasma membrane	21.73	7.23
GSMUA_Achr7P23880_001	Banana	plasma membrane	19.49	6.37
GSMUA_Achr3P20510_001	Banana	plasma membrane	21.41	5.71
GSMUA_Achr7P23890_001	Banana	plasma membrane	21.09	5.64
GSMUA_Achr3P20560_001	Banana	plastid	4.79	5.23
GSMUA_Achr3P20520_001	Banana	plasma membrane, plastid	1.92	0.98
GSMUA_AchrUn_...	Banana	mitochondrion	0.64	0.54
GSMUA_AchrUn_...	Banana	extracellular, golgi, plasma membrane	0.64	0.18

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	GO:GO:0009941	GO:GO:0016020	GO:GO:0016787
GO:GO:0016887	EnsemblPlantsGene:GSMUA_Achr1G13520_001	EnsemblPlants:GSMUA_Achr1P13520_001	EnsemblPlants:GSMUA_Achr1T13520_001	InterPro:IPR003439	UniProt:M0RZL0
InterPro:P-loop_NTPase	PFAM:PF00005	PFscan:PS50893	PANTHER:PTHR43553	PANTHER:PTHR43553:SF12	SMART:SM00382
SUPFAM:SSF52540	UniParc:UPI0002965E38	SEG:seg	:	:	:

Description

ABC transporter I family member 11, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr1G13520_001]

Coordinates

chr1:-:10313721..10318241

Molecular Weight (calculated)

34646.0 Da

IEP (calculated)

10.295

GRAVY (calculated)

-0.186

Length

313 amino acids

Sequence
(BLAST)

001: MFSPRLSAAQ PATGLQPAKR RAASTVRRRK TAAASVNSAS MAFCYGSPCS GFRHNKLCAA EMVPSAYRRV ATKSRALRIS SDHSCIEVRR VNYRPPGTQH
101: NLLNEVSLSL REKSFGLIFG RSGSGKTTLL HLLAGLSKPT SGSIIVQRYG YDGKPSDSPE PLAPERVGIV FQFPERYFLA DTILEEMTFG WPRQKADFTL
201: REQLALNLQY AVNSVGLNTI SLDEDPHSLS GGYKRRLALA IQLVQTPQLL LLDEPLAGLD WKARADVVKL LKHLKKELTI LVVSHDLKEL SSLVDISWRM
301: QMGGILKEEA FPL

Best Arabidopsis Sequence Match ( AT5G14100.1 )
(BLAST)

001: MAVSTFSSPT PVFGIAEPPA SFSSTAIGWK QPLRFRRTKK PRVISCDYSC IEVRDVCYRP PGTQLNILNG VNFSLREKSF GLIFGKSGSG KTTLLQLLAG
101: LNKPTSGSIC IQGYGDDGQP KADPDLLPTE KVGIVFQFPE RFFVADNVLD EITFGWPRQK GSLQLKEQLT SNLQRAFNWV GLDSIPLDKD PQLLSGGYKR
201: RLALAIQLVQ TPDLLILDEP LAGLDWKARA DVAKLLKHLK KELTLLVVSH DLRELAALVD QSWRMETGGV LVAERPPL

Arabidopsis Description

ABCI11ABC transporter I family member 11, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LEF6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.