Factsheet for VIT_14s0068g01730.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g068180.2.1	Tomato	plastid	65.85	68.25
Bra008779.1-P	Field mustard	plastid	65.14	67.52
CDX69605	Canola	plastid	64.79	67.15
CDY58413	Canola	cytosol, plastid	64.44	66.79
TraesCS3A01G399500.1	Wheat	plastid	62.68	66.67
KRG94568	Soybean	mitochondrion	61.27	66.67
AT5G14100.1	Thale cress	plastid	65.14	66.55
HORVU3Hr1G089880.8	Barley	plastid	63.03	65.81
TraesCS3D01G393600.2	Wheat	plastid	63.38	65.22
TraesCS3B01G432400.1	Wheat	plastid	62.68	64.96
KXG28389	Sorghum	plastid	61.27	63.97
Os11t0490800-02	Rice	plastid	62.32	61.25
GSMUA_Achr1P13520_001	Banana	plastid	64.44	58.47
Zm00001d007328_P003	Maize	plastid	56.34	52.81
TraesCS3A01G399400.1	Wheat	cytosol	34.51	38.74
VIT_11s0052g00540.t01	Wine grape	cytosol	22.89	24.25
VIT_04s0023g00290.t01	Wine grape	plastid	22.54	18.77
VIT_12s0055g00730.t01	Wine grape	extracellular	5.99	13.39
VIT_18s0041g02240.t01	Wine grape	plasma membrane	21.48	8.29
VIT_17s0000g05860.t01	Wine grape	plasma membrane, plastid	22.89	6.85
VIT_17s0000g05850.t01	Wine grape	plasma membrane	22.18	6.58
VIT_08s0007g08730.t01	Wine grape	mitochondrion, plasma membrane	22.18	3.35
VIT_07s0095g00600.t01	Wine grape	extracellular	0.7	2.9

Protein Annotations

EntrezGene:100242979	wikigene:100242979	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like
ProteinID:CBI21327	ProteinID:CBI21327.3	UniProt:D7SVM8	EMBL:FN595232	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	GO:GO:0009941	GO:GO:0016020	GO:GO:0016787
GO:GO:0016887	InterPro:IPR003439	EntrezGene:LOC100242979	wikigene:LOC100242979	InterPro:P-loop_NTPase	PFAM:PF00005
PFscan:PS50893	PANTHER:PTHR43553	PANTHER:PTHR43553:SF12	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI000198493C
ArrayExpress:VIT_14s0068g01730	EnsemblPlantsGene:VIT_14s0068g01730	EnsemblPlants:VIT_14s0068g01730.t01	RefSeq:XP_002274500	RefSeq:XP_002274500.1	RefSeq:XP_019080846.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr14:-:25427501..25440208

Molecular Weight (calculated)

31859.6 Da

IEP (calculated)

8.600

GRAVY (calculated)

-0.113

Length

284 amino acids

Sequence
(BLAST)

001: MTNYVCKAQP PPTAVSSASY FGHSLFFHSP PAILTRPCRS KFWRIRNLRI SCEYSCIEVR GVSYRPQGTE FDLLNDVNFS LPEKSFGLIF GRSGSGKTTL
101: LQLLAGINKP TSGSIFVQKY GDDGKLTQTS EPLPSERVGI LFQFPERYFV ADNVLEEVTF GWPRQRGSFQ LKEHLALGLE RAINWVGLNG ISLDKDPHSL
201: SGGYKRRLAL AIQLVQIPDL LILDEPLAGL DWKARADVVE LLKHLKKELT ILVVSHDLKE LAALVDRSWR MEMGGVLKEE PIAF

Best Arabidopsis Sequence Match ( AT5G14100.1 )
(BLAST)

001: MAVSTFSSPT PVFGIAEPPA SFSSTAIGWK QPLRFRRTKK PRVISCDYSC IEVRDVCYRP PGTQLNILNG VNFSLREKSF GLIFGKSGSG KTTLLQLLAG
101: LNKPTSGSIC IQGYGDDGQP KADPDLLPTE KVGIVFQFPE RFFVADNVLD EITFGWPRQK GSLQLKEQLT SNLQRAFNWV GLDSIPLDKD PQLLSGGYKR
201: RLALAIQLVQ TPDLLILDEP LAGLDWKARA DVAKLLKHLK KELTLLVVSH DLRELAALVD QSWRMETGGV LVAERPPL

Arabidopsis Description

ABCI11ABC transporter I family member 11, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LEF6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.