Factsheet for Solyc02g068180.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008779.1-P	Field mustard	plastid	67.52	67.52
CDX69605	Canola	plastid	67.15	67.15
AT5G14100.1	Thale cress	plastid	67.88	66.91
CDY58413	Canola	cytosol, plastid	66.79	66.79
TraesCS3A01G399500.1	Wheat	plastid	64.23	65.92
KRG94568	Soybean	mitochondrion	62.77	65.9
VIT_14s0068g01730.t01	Wine grape	plastid	68.25	65.85
KXG28389	Sorghum	plastid	63.5	63.97
TraesCS3B01G432400.1	Wheat	plastid	63.87	63.87
TraesCS3D01G393600.2	Wheat	plastid	64.23	63.77
HORVU3Hr1G089880.8	Barley	plastid	63.14	63.6
GSMUA_Achr1P13520_001	Banana	plastid	66.42	58.15
Os11t0490800-02	Rice	plastid	61.31	58.13
Zm00001d007328_P003	Maize	plastid	57.66	52.15
TraesCS3A01G399400.1	Wheat	cytosol	34.67	37.55
Solyc06g068600.2.1	Tomato	cytosol	18.61	27.57
Solyc03g117810.2.1	Tomato	cytosol	25.18	26.24
Solyc04g056650.2.1	Tomato	plastid	24.82	19.43
Solyc03g113080.2.1	Tomato	cytosol	15.33	11.73
Solyc06g070920.2.1	Tomato	extracellular, plasma membrane	25.18	10.81
Solyc06g070950.1.1	Tomato	plasma membrane	24.45	7.52
Solyc03g113040.2.1	Tomato	plastid	24.45	7.09
Solyc03g113060.2.1	Tomato	extracellular	24.09	6.99
Solyc06g070960.1.1	Tomato	plasma membrane	20.8	6.16
Solyc06g070940.2.1	Tomato	plasma membrane	20.07	5.83
Solyc04g015970.2.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	21.53	3.09
Solyc03g113070.2.1	Tomato	plasma membrane	4.74	2.26
Solyc06g070930.2.1	Tomato	plastid	0.0	0.0

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	GO:GO:0009941	GO:GO:0016020	GO:GO:0016787
GO:GO:0016887	InterPro:IPR003439	UniProt:K4B7F0	InterPro:P-loop_NTPase	PFAM:PF00005	PFscan:PS50893
PANTHER:PTHR43553	PANTHER:PTHR43553:SF12	SMART:SM00382	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc02g068180.2	EnsemblPlants:Solyc02g068180.2.1
UniParc:UPI000276791A	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2:+:38200587..38207677

Molecular Weight (calculated)

30246.7 Da

IEP (calculated)

9.503

GRAVY (calculated)

-0.135

Length

274 amino acids

Sequence
(BLAST)

001: MGSVPLPSSS LLISSSSSSI FGRSSSTISY PHRRFRKVDV SCDYSCFEIR DVSYRPPGTK IDLLSQVNLS IPEKSFGLIF GRSGSGKTTL LQLIAGLSKP
101: TSGSIYVQRY GDDDQQIKSP EPLQPERVGI VFQFPERYFV ADTVLDEVTF GWPRQKGGLQ LRELLASRLQ KAIMSVGLTG ISLDKDPHSL SGGYKRRLAL
201: AIQLVQTPDL LILDEPLAGL DWKARADVAK LLKDLKKELT LLVVSHDLKE LASLVDQSWR MEMGGALKKE PLPI

Best Arabidopsis Sequence Match ( AT5G14100.1 )
(BLAST)

001: MAVSTFSSPT PVFGIAEPPA SFSSTAIGWK QPLRFRRTKK PRVISCDYSC IEVRDVCYRP PGTQLNILNG VNFSLREKSF GLIFGKSGSG KTTLLQLLAG
101: LNKPTSGSIC IQGYGDDGQP KADPDLLPTE KVGIVFQFPE RFFVADNVLD EITFGWPRQK GSLQLKEQLT SNLQRAFNWV GLDSIPLDKD PQLLSGGYKR
201: RLALAIQLVQ TPDLLILDEP LAGLDWKARA DVAKLLKHLK KELTLLVVSH DLRELAALVD QSWRMETGGV LVAERPPL

Arabidopsis Description

ABCI11ABC transporter I family member 11, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LEF6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.