Factsheet for Solyc03g113080.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plasma membrane 1
plastid 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	17.6	52.5
Solyc06g070940.2.1	Tomato	plasma membrane	64.25	24.39
Solyc06g070960.1.1	Tomato	plasma membrane	59.22	22.89
Solyc06g068600.2.1	Tomato	cytosol	9.5	18.38
Solyc06g070920.2.1	Tomato	extracellular, plasma membrane	27.93	15.67
Solyc02g068180.2.1	Tomato	plastid	11.73	15.33
Solyc03g117810.2.1	Tomato	cytosol	9.78	13.31
Solyc04g056650.2.1	Tomato	plastid	11.73	12.0
Solyc06g070950.1.1	Tomato	plasma membrane	28.49	11.45
Solyc03g113060.2.1	Tomato	extracellular	28.21	10.7
Solyc03g113040.2.1	Tomato	plastid	28.21	10.69
AT2G41700.1	Thale cress	mitochondrion, plasma membrane	34.92	6.64
CDY22536	Canola	mitochondrion, plasma membrane	34.08	6.58
Bra000236.1-P	Field mustard	mitochondrion	33.8	6.57
CDY35403	Canola	mitochondrion, plasma membrane	34.08	6.56
KRH66908	Soybean	cytosol	33.24	6.52
Solyc04g015970.2.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	34.36	6.44
VIT_08s0007g08730.t01	Wine grape	mitochondrion, plasma membrane	33.52	6.38
Bra038152.1-P	Field mustard	plasma membrane, vacuole	1.4	1.22
Solyc06g070930.2.1	Tomato	plastid	0.28	0.36
Solyc03g113070.2.1	Tomato	plasma membrane	0.56	0.35

Protein Annotations

MapMan:24.1.3.2.1	Gene3D:3.40.50.300	InterPro:ABCA	InterPro:ABC_transporter-like	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0043231	GO:GO:0055085	InterPro:IPR003439
UniProt:K4BKG1	InterPro:P-loop_NTPase	PFAM:PF00005	PANTHER:PTHR19229	PANTHER:PTHR19229:SF193	SUPFAM:SSF52540
EnsemblPlantsGene:Solyc03g113080.2	EnsemblPlants:Solyc03g113080.2.1	UniParc:UPI0002767A30	:	:	:

Description

No Description!

Coordinates

chr3:+:63372062..63374060

Molecular Weight (calculated)

39246.3 Da

IEP (calculated)

5.899

GRAVY (calculated)

-0.145

Length

358 amino acids

Sequence
(BLAST)

001: MIGVCPQFDI LWDALSGQEH LHIFASIKGL PPGLIKEVVE KSLAEVKLTQ ATRMRAGSYS GGMKRRLSVA IALIGEPKLV ILDEPTTGMD PITRRHVWDI
101: IEDAKKGRAI ILTTHSMEEA DILSDRIGIM AKGRLRCIGT SIRLKSRFGT GFIANVSFSG GTNGTPDRED TLSTPQHEAV KQFFKSRLDV VPTEENKSFL
201: TFIIPHAKEK LLTDFFAELQ DRDKEFGISD IQLGLTTLEE VFLNIARQAE LEEVAEGSSA TLTLNTGVSL QIPIGARFVK IPGTESSENP IGTMVEVYWD
301: QDDSGRLCIS GHSPDMPIPA HVQLIDPPTD TSSRGFLRKR KQIQGIVIDP AQITGASS

Best Arabidopsis Sequence Match ( AT3G47730.1 )
(BLAST)

001: MTLQRGLPLL LQQYTALFKK NLLLSWRSKR ATFLQLFASF FFILLIFCIQ AAMEKSFASS TALKTVTDPT ALISPPIPPC EDKFFVNLPC YDFVWSGNRS
101: SKVTQIVNAI MKNNPGRSIP IEKVRSFVDP EAVDTWLMAN PLLVPGALHF IERNATVISY GIQTNSTPEM NRGRFEDPTF KFQIPLQIAA EREIARSLIG
201: DPNFNWVVGF KEFPHPTIEA IVALDTIGPT FFLAVAMFGF VLQISSLITE KELKLRQAMT MMGVFDTAYW LSWLTWEGIL TAISALLTVL FGMMFQFDFF
301: LKNSFPVVFL LFMLFQFNLI GLAFMLSAFI SKSTSATTVG FFVFLVGFVT QLATSSGFPY AKKYSRMIRA LWSLFPPNTF SQGLKLLADA TSTPQDPGIS
401: WSKRAECGPN DDTGCVLTIN DIYLWLLGTF FLWFVLALYF DNITPNASGV RKSIFYFLKP GYWTGKGGNR VEEGGICSCI GSVPPVDHIT PDDEDVLEEE
501: TLVKQHSMEG LVDPNVAVQI RGLAKTYPGT TKFGCCKCKK TSPFHALKGL WMNIAKDQLF CLLGPNGAGK TTTINCLTGL FPVTGGDALI YGNSIRSSVG
601: MSNIRKMIGV CPQFDILWDA LSGEEHLKLF ASIKGLPPSS INSMVEKSLA EVKLTEAGKI RAGSYSGGMK RRLSVAVSLI GDPKLVFLDE PTTGMDPITR
701: RHVWDIIQET KKGRAIILTT HSMEEADILS DRIGIMAKGR LRCIGTSIRL KSRFGTGFIA NISFVESNNH NGEAGSDSRE PVKKFFKDHL KVKPIEENKA
801: FMTFVIPHDK ENLLTSFFAE LQDREEEFGI SDIQLGLATL EEVFLNIARK AELESAAVDG TMVTLDLTSG SSVEIPVGAR FIGIPGTETA ENPRGVMVEV
901: YWQQDESGSL CISGHSTEMP IPENIPVTDP VAPGHGGVNL LGRRGRRQVQ GIVIDPEFAT FTRSGSTSSR RFSRSGSSRR FSS

Arabidopsis Description

ABCA2ATH1 [Source:UniProtKB/TrEMBL;Acc:A0A178V6R6]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.