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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:
  • plastid 1
  • mitochondrion 4
  • endoplasmic reticulum 1
  • plasma membrane 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY35403 Canola mitochondrion, plasma membrane 98.22 97.85
Bra000236.1-P Field mustard mitochondrion 96.87 97.45
AT2G41700.1 Thale cress mitochondrion, plasma membrane 91.53 90.12
GSMUA_AchrUn_... Banana cytosol 5.07 78.33
VIT_08s0007g08730.t01 Wine grape mitochondrion, plasma membrane 73.07 71.98
KRH66908 Soybean cytosol 67.03 68.02
Solyc03g113080.2.1 Tomato cytosol 6.58 34.08
CDY62594 Canola cytosol 7.5 30.42
CDX94927 Canola cytosol 1.89 29.41
CDY64180 Canola plasma membrane 9.88 29.19
CDY02116 Canola plasma membrane 12.74 28.1
CDX68439 Canola nucleus 2.37 27.85
CDY23043 Canola cytosol, mitochondrion 7.66 27.73
CDY02120 Canola cytosol, nucleus, plasma membrane 9.55 26.86
CDY23040 Canola plasma membrane 13.76 26.73
CDY23042 Canola plasma membrane 13.49 26.68
CDY52820 Canola cytosol, nucleus, plasma membrane 12.63 26.65
CDY24159 Canola golgi, mitochondrion 13.33 26.36
CDY23800 Canola plasma membrane 12.95 26.23
CDY31786 Canola cytosol, nucleus, plasma membrane 9.34 26.21
CDX68434 Canola plasma membrane 10.04 26.2
CDY36933 Canola golgi, mitochondrion 13.6 26.11
CDY02118 Canola plasma membrane 13.55 25.23
CDX68440 Canola cytosol, mitochondrion 1.78 23.74
CDY01873 Canola cytosol 3.35 23.48
CDX96058 Canola cytosol 3.29 23.11
CDX69605 Canola plastid 3.35 22.63
CDY58413 Canola cytosol, plastid 3.35 22.63
CDY62599 Canola plasma membrane 10.58 22.55
CDX68435 Canola mitochondrion, plastid 3.02 21.46
CDY02114 Canola plasma membrane 10.15 21.2
CDY23039 Canola plasma membrane 10.09 21.06
CDY36932 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 9.98 20.88
CDY21797 Canola plasma membrane 10.09 20.69
Solyc03g113070.2.1 Tomato plasma membrane 6.37 20.49
CDY24158 Canola plasma membrane 10.2 20.41
CDX77874 Canola plasma membrane 9.12 20.39
CDY24156 Canola plasma membrane 10.36 20.38
CDY36930 Canola plasma membrane 10.36 20.38
CDY57805 Canola plastid 3.62 20.36
CDY16404 Canola plastid 3.62 20.36
CDX83025 Canola plasma membrane 10.31 20.28
CDX68441 Canola plasma membrane 10.25 20.17
CDY39546 Canola plasma membrane 10.04 19.89
CDX77421 Canola plasma membrane 9.98 19.79
CDY36931 Canola plastid 9.66 19.23
CDY23798 Canola nucleus, peroxisome, plasma membrane 3.94 19.01
CDY02115 Canola extracellular, mitochondrion, plasma membrane, plastid 3.72 18.9
CDY24157 Canola plastid 9.66 18.82
CDY62596 Canola cytosol, plasma membrane, vacuole 3.02 18.24
CDX68438 Canola endoplasmic reticulum, extracellular, plasma membrane 3.72 16.2
CDY39288 Canola cytosol 1.62 15.15
CDX68436 Canola plasma membrane 2.32 14.63
CDY02119 Canola endoplasmic reticulum, plasma membrane, plastid 1.19 12.29
CDY24573 Canola plasma membrane 1.03 11.95
CDY23799 Canola cytosol, peroxisome, plasma membrane 1.19 10.78
Protein Annotations
MapMan:24.1.3.2.1Gene3D:3.40.50.300GO:A0A078GB01UniProt:A0A078GB01InterPro:AAA+_ATPaseInterPro:ABCA
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDY22536ProteinID:CDY22536ProteinID:CDY22536.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887
GO:GO:0042626GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00019127001InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005
PFAM:PF12698ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19229PANTHER:PTHR19229:SF36SMART:SM00382
SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0004EDFBE0SEG:seg::
Description
BnaC03g23460DBnaC03g23460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GB01]
Coordinates
chrLK032132:-:465056..477151
Molecular Weight (calculated)
205540.0 Da
IEP (calculated)
6.547
GRAVY (calculated)
0.129
Length
1853 amino acids
Sequence
(BLAST)
0001: MGTWRRQLKA MLRKNWLLKT RHPFVTAAEI LLPTVVMLLL IAVRTRVDTT IHPARSNIEK DTVVQVGEGI SPSFPQVLEL LIADGEYLAF APDTDETNNM
0101: IDILSLNFPD LRLVTRIFKD DIELETYITS AHYAVCSDVR NCSNPKLNGA VVFHEQGPHV YDYSIRLNHT WALAGFPNVK SIMDTNGPYI NDLEMGINTI
0201: PTMQYSFSGF LTLQQVVDSF IIFASQQNID LPSSHASLGS ALSLEMPWTM FSPSKIRMVP FPTREYTDDE FQSIVKSVMG LLYLLGFLFP ISRLISYSAF
0301: EKEQKIREGL YMMGLKDEIF HLSWFITYAL QAVRIVRWDY YSFAIMLSFL ISTFFTRAKT AVAVGTLAFL GAFFPYYTVN DESVSMVLKV VASLLSPTAF
0401: ALGSINFADY ERAHVGLRWS NIWLASSGVS FFVCLLMMLL DSILYCAIGL YLDKVLPREN GVRYPWNFIF NKCFGRKKNN QYCIPGLNTN IEGTQGEPFD
0501: PVIESISLEM RQQELDGRCI QIKNLHKVFA SGRGNCCAVN SLRLTLYENQ ILSLLGHNGA GKSTTISMLV GLLPPTSGDA LILGNSIVSN MDEIRKELGV
0601: CPQHDILFPE LTVREHLEMF AVLKGVKEDS LKSTVTDMAE EVGLSDKIST LVRALSGGMK RKLSLGIALI GNSKVIILDE PTSGMDPYSM RLTWQLIKKI
0701: KKGRIILLTT HSMDEAEELG DRIGIMANGS LKCCGSSMFL KHHYGVGYTL TLVKTSPAVS VAANIVHRHI PSATCVSEVG NEISFKLPLA SLPCFENMFR
0801: EVESCMKSSV DRSRISEIED SDYPGIQSYG ISVTTLEEVF LRVAGCNLDI EDKQEDTFAS PDTEASLVCI ESVQKSTSQP KLLASCNEGV GVIITSIAKA
0901: CRLIVAAVWA FIGFISMQCC GCSVISRSMF WRHCKALFIK RARSAFRDRK TVAFQLIIPA VFLLFGLLLL QLKPHPDQKS ITLTTAYFNP LLSGYGGGGP
1001: IPFDLSQPIA KEVAEYIEGG WIQPLRNSSY KFPNPKEALA DAIDAAGPTL GPTLLSMSEF LMSSFDQSYE SRYGAVLMDS QHPDGSVGYT VLHNSTCQHA
1101: GPIYINVMHS ALLRLASGNK NMTIQTRNHP LPPTKSQRLQ RHDLDAFSAA IIVSIAFSFI PASFAVPIVK EREVKAKHQQ LISGVSVLSY WLSTYVWDFV
1201: SFLFPSTFAV ILFYAFGLEQ FIGIGRFLPT FLMLLEYGLA IASSTYCLTF FFTEHSMAQN VILMVHFFSG LILMVISFVM GLIPATVNAN SYLKTFFRLS
1301: PGFCFSDGLA SLALLRQGMK DKSSHGVFDW NVTGASISYL ALESIFYFLL TLGLEVLPVQ KVMSFSIGEW WQNFKGFKQG AGSSSTEPLL KDSTGAISAD
1401: MEDDIDVQEE RDRVISGLTD NTIFYLQNLR KVYPGSNHHV PKVAVQSLTF SVQAGECFGF LGTNGAGKTT TLSMLSGEET PTSGTAFVFG KDIVASPKVI
1501: RQHIGYCPQF DALFDYLTVK EHLELYARIK GVVDYRIDNV VMEKLVEFDL LKHSHKPSFT LSGGNKRKLS VAIAMIGDPP IVILDEPSTG MDPVAKRFMW
1601: DVISRLSTRS GKTAVILTTH SMNEAQALCT RIGIMVGGRL RCIGSPQHLK TRFGNHLELE VKPNEVSHVD LENLCQMIQQ WMFNVPSQPR SLLGDLEVCI
1701: GVSDSITPDT ASASEISLSP DMIQSIAKYL GNEQRVSALV PPMPEEDVGF DEQLSEQLFR DGGIPLPIFA EWWLTKEKFS ALDSFIQSSF PGATFKSCNG
1801: LIIKYQLPFG EGGLSLADAF GHLERNRNRL GIAEYSISQS TLETIFNHFA ANS
Best Arabidopsis Sequence Match ( AT2G41700.1 )
(BLAST)
0001: MGSSKRQFKA MLRKNWLLKT RHPFVTSAEI LLPTIVMLLL IAVRTRVDTT IHPAHSNIDK DTVVEVGKGN SPSFPEVLKL LLAEGDFLAF APDTDETNNM
0101: IDILSLKFPE LRLVTKIFKD DIELETYITS AHYGVCSEVR NCSNPKIKGA VVFHEQGPHL FDYSIRLNHT WAFAGFPNVK SIMDTNGPYI NDLEMGINTI
0201: PTMQYSFSGF LTLQQVVDSF IIFASQQNND LPLSHSNLSS ALRFELPWTL FSPSVIRMVP FPTREYTDDE FQSIVKSVMG LLYLLGFLFP ISRLISYSVF
0301: EKEQKIREGL YMMGLKDEIF HLSWFITYAL QFALCSGIIT ACTMGSLFKY SDKTLVFTYF FLFGLSAIML SFMISTFFTR AKTAVAVGTL TFLGAFFPYY
0401: TVNDESVSMV LKVVASLLSP TAFALGSINF ADYERAHVGL RWSNIWRASS GVSFFVCLLM MLLDSILYCA LGLYLDKVLP RENGVRYPWN FIFSKYFGRK
0501: KNNLQNRIPG FETDMFPADI EVNQGEPFDP VFESISLEMR QQELDGRCIQ VRNLHKVYAS RRGNCCAVNS LQLTLYENQI LSLLGHNGAG KSTTISMLVG
0601: LLPPTSGDAL ILGNSIITNM DEIRKELGVC PQHDILFPEL TVREHLEMFA VLKGVEEGSL KSTVVDMAEE VGLSDKINTL VRALSGGMKR KLSLGIALIG
0701: NSKVIILDEP TSGMDPYSMR LTWQLIKKIK KGRIILLTTH SMDEAEELGD RIGIMANGSL KCCGSSIFLK HHYGVGYTLT LVKTSPTVSV AAHIVHRHIP
0801: SATCVSEVGN EISFKLPLAS LPCFENMFRE IESCMKNSVD RSKISEIEDS DYPGIQSYGI SVTTLEEVFL RVAGCNLDIE DKQEDIFVSP DTKSSLVCIG
0901: SNQKSSMQPK LLASCNDGAG VIITSVAKAF RLIVAAVWTL IGFISIQCCG CSIISRSMFW RHCKALFIKR ARSACRDRKT VAFQFIIPAV FLLFGLLFLQ
1001: LKPHPDQKSI TLTTAYFNPL LSGKGGGGPI PFDLSVPIAK EVAQYIEGGW IQPLRNTSYK FPNPKEALAD AIDAAGPTLG PTLLSMSEFL MSSFDQSYQS
1101: RYGSILMDGQ HPDGSLGYTV LHNGTCQHAG PIYINVMHAA ILRLATGNKN MTIQTRNHPL PPTKTQRIQR HDLDAFSAAI IVNIAFSFIP ASFAVPIVKE
1201: REVKAKHQQL ISGVSVLSYW LSTYVWDFIS FLFPSTFAII LFYAFGLEQF IGIGRFLPTV LMLLEYGLAI ASSTYCLTFF FTEHSMAQNV ILMVHFFSGL
1301: ILMVISFVMG LIPATASANS YLKNFFRLSP GFCFSDGLAS LALLRQGMKD KSSHGVFEWN VTGASICYLG LESIFYFLVT LGLELMPVQK VMSFSIGEWW
1401: QNLKAFKQGA GSSSTEPLLK DSTGAISTDM EDDIDVQEER DRVISGLSDN TMLYLQNLRK VYPGDKHHGP KVAVQSLTFS VQAGECFGFL GTNGAGKTTT
1501: LSMLSGEETP TSGTAFIFGK DIVASPKAIR QHIGYCPQFD ALFEYLTVKE HLELYARIKG VVDHRIDNVV TEKLVEFDLL KHSHKPSFTL SGGNKRKLSV
1601: AIAMIGDPPI VILDEPSTGM DPVAKRFMWD VISRLSTRSG KTAVILTTHS MNEAQALCTR IGIMVGGRLR CIGSPQHLKT RYGNHLELEV KPNEVSNVEL
1701: ENFCQIIQQW LFNVPTQPRS LLGDLEVCIG VSDSITPDTA SASEISLSPE MVQRIAKFLG NEQRVSTLVP PLPEEDVRFD DQLSEQLFRD GGIPLPIFAE
1801: WWLTKEKFSA LDSFIQSSFP GATFKSCNGL SIKYQLPFGE GGLSLADAFG HLERNRNRLG IAEYSISQST LETIFNHFAA NS
Arabidopsis Description
ABCA1ABC transporter A family member 1 [Source:UniProtKB/Swiss-Prot;Acc:Q84M24]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.