Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- vacuole 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY02115 | Canola | extracellular, mitochondrion, plasma membrane, plastid | 77.52 | 65.21 |
| CDX68435 | Canola | mitochondrion, plastid | 40.39 | 47.51 |
| CDY52820 | Canola | cytosol, nucleus, plasma membrane | 86.97 | 30.41 |
| CDY23040 | Canola | plasma membrane | 88.93 | 28.62 |
| CDY23042 | Canola | plasma membrane | 77.85 | 25.51 |
| CDY02116 | Canola | plasma membrane | 68.4 | 25.0 |
| AT5G61730.2 | Thale cress | plasma membrane, plastid | 75.24 | 24.32 |
| CDY02118 | Canola | plasma membrane | 77.2 | 23.82 |
| CDY23800 | Canola | plasma membrane | 68.08 | 22.84 |
| CDY24573 | Canola | plasma membrane | 11.73 | 22.64 |
| CDY24159 | Canola | golgi, mitochondrion | 61.56 | 20.17 |
| VIT_17s0000g05850.t01 | Wine grape | plasma membrane | 62.54 | 20.04 |
| GSMUA_Achr7P23880_001 | Banana | plasma membrane | 61.89 | 19.83 |
| CDY36933 | Canola | golgi, mitochondrion | 61.56 | 19.59 |
| PGSC0003DMT400046727 | Potato | plasma membrane | 58.96 | 19.38 |
| TraesCS1B01G356100.2 | Wheat | plasma membrane | 59.28 | 18.88 |
| TraesCS1A01G342900.2 | Wheat | plasma membrane | 59.28 | 18.84 |
| KRH54517 | Soybean | plasma membrane | 58.96 | 18.72 |
| TraesCS1D01G345100.2 | Wheat | mitochondrion, plasma membrane, plastid | 58.63 | 18.65 |
| Os08t0398000-01 | Rice | plasma membrane | 58.63 | 18.59 |
| HORVU1Hr1G075640.9 | Barley | golgi | 59.28 | 18.59 |
| EES14950 | Sorghum | mitochondrion, plasma membrane, plastid | 57.65 | 18.42 |
| Zm00001d032279_P005 | Maize | golgi, plastid | 57.65 | 18.25 |
| KRH63387 | Soybean | plasma membrane, plastid | 55.7 | 17.78 |
| Solyc06g070960.1.1 | Tomato | plasma membrane | 49.84 | 16.52 |
| CDY64180 | Canola | plasma membrane | 33.55 | 16.43 |
| CDX68434 | Canola | plasma membrane | 20.85 | 9.01 |
| CDY23798 | Canola | nucleus, peroxisome, plasma membrane | 10.75 | 8.59 |
| CDX77874 | Canola | plasma membrane | 21.82 | 8.08 |
| CDY02119 | Canola | endoplasmic reticulum, plasma membrane, plastid | 4.23 | 7.26 |
| CDY21797 | Canola | plasma membrane | 20.85 | 7.08 |
| CDY23799 | Canola | cytosol, peroxisome, plasma membrane | 4.56 | 6.86 |
| CDY36930 | Canola | plasma membrane | 20.85 | 6.79 |
| CDY24156 | Canola | plasma membrane | 20.85 | 6.79 |
| CDY24157 | Canola | plastid | 20.52 | 6.62 |
| CDY02120 | Canola | cytosol, nucleus, plasma membrane | 14.01 | 6.53 |
| CDY31786 | Canola | cytosol, nucleus, plasma membrane | 14.01 | 6.52 |
| CDY24158 | Canola | plasma membrane | 19.54 | 6.48 |
| CDX83025 | Canola | plasma membrane | 19.87 | 6.48 |
| CDY36931 | Canola | plastid | 19.22 | 6.34 |
| CDY02114 | Canola | plasma membrane | 18.24 | 6.31 |
| CDX77421 | Canola | plasma membrane | 19.22 | 6.31 |
| CDY39546 | Canola | plasma membrane | 19.22 | 6.31 |
| CDY23039 | Canola | plasma membrane | 18.24 | 6.31 |
| CDY62599 | Canola | plasma membrane | 17.59 | 6.21 |
| CDY36932 | Canola | endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid | 17.92 | 6.21 |
| CDX68441 | Canola | plasma membrane | 17.92 | 5.84 |
| CDX68438 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 7.17 | 5.16 |
| CDX68436 | Canola | plasma membrane | 3.26 | 3.4 |
| CDY22536 | Canola | mitochondrion, plasma membrane | 18.24 | 3.02 |
| CDY35403 | Canola | mitochondrion, plasma membrane | 17.92 | 2.96 |
| CDX68440 | Canola | cytosol, mitochondrion | 1.3 | 2.88 |
| CDX68439 | Canola | nucleus | 0.98 | 1.9 |
| CDY58413 | Canola | cytosol, plastid | 1.63 | 1.82 |
| GSMUA_Achr3P20560_001 | Banana | plastid | 1.3 | 1.39 |
| CDY01873 | Canola | cytosol | 0.98 | 1.14 |
| CDX96058 | Canola | cytosol | 0.98 | 1.14 |
| CDX69605 | Canola | plastid | 0.98 | 1.09 |
| CDY16404 | Canola | plastid | 0.98 | 0.91 |
| CDY57805 | Canola | plastid | 0.65 | 0.61 |
| CDY62594 | Canola | cytosol | 0.0 | 0.0 |
| GSMUA_Achr3P20540_001 | Banana | cytosol, extracellular, nucleus | 0.0 | 0.0 |
| CDX94927 | Canola | cytosol | 0.0 | 0.0 |
| CDY39288 | Canola | cytosol | 0.0 | 0.0 |
| CDY23043 | Canola | cytosol, mitochondrion | 0.0 | 0.0 |
Protein Annotations
| MapMan:35.1 | GO:A0A078JCU2 | UniProt:A0A078JCU2 | InterPro:ABCA | EnsemblPlants:CDY62596 | ProteinID:CDY62596 |
| ProteinID:CDY62596.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0042626 | GO:GO:0055085 |
| EnsemblPlantsGene:GSBRNA2T00036431001 | PFAM:PF12698 | PANTHER:PTHR19229 | PANTHER:PTHR19229:SF193 | TMHMM:TMhelix | UniParc:UPI0004EE353B |
| SEG:seg | : | : | : | : | : |
Description
BnaCnng40480DBnaCnng40480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JCU2]
Coordinates
chrLK034166:-:11532..14355
Molecular Weight (calculated)
34655.3 Da
IEP (calculated)
6.783
GRAVY (calculated)
0.421
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MLELNRLTHS SEHVNITDPK ALASPPIPLC EDKFYAKLPC YDFVWSGNQS RRVSDIVSAI MANNPGRPIP TNKVWFLLWP EEVDAWFTSH PLHAPGALHF
101: TERNATMISY GVQTNSSSAP KRGQTEDPTF KFIVPLQIAA EREIARFLIG DPKFCWSFGF KEFAQPAVAK DVTISPLNLM GPVFFLAFSM FSFALQLGFL
201: ATEKELKLCQ AMTVMGVYDT AYWLSWLIWD GILTFVSSLF LVLFGMMFQF DFFLKNSFFV IFLLFLLFHL AFMLSSFISK SSSATTVGFL VFLIVFITQT
301: VATGGFP
101: TERNATMISY GVQTNSSSAP KRGQTEDPTF KFIVPLQIAA EREIARFLIG DPKFCWSFGF KEFAQPAVAK DVTISPLNLM GPVFFLAFSM FSFALQLGFL
201: ATEKELKLCQ AMTVMGVYDT AYWLSWLIWD GILTFVSSLF LVLFGMMFQF DFFLKNSFFV IFLLFLLFHL AFMLSSFISK SSSATTVGFL VFLIVFITQT
301: VATGGFP
001: MTLQRGLPLL LQQYTALFKK NLLLSWRSKR ATFLQLFASF FFILLIFCIQ AAMEKSFASS TALKTVTDPT ALISPPIPPC EDKFFVNLPC YDFVWSGNRS
101: SKVTQIVNAI MKNNPGRSIP IEKVRSFVDP EAVDTWLMAN PLLVPGALHF IERNATVISY GIQTNSTPEM NRGRFEDPTF KFQIPLQIAA EREIARSLIG
201: DPNFNWVVGF KEFPHPTIEA IVALDTIGPT FFLAVAMFGF VLQISSLITE KELKLRQAMT MMGVFDTAYW LSWLTWEGIL TAISALLTVL FGMMFQFDFF
301: LKNSFPVVFL LFMLFQFNLI GLAFMLSAFI SKSTSATTVG FFVFLVGFVT QLATSSGFPY AKKYSRMIRA LWSLFPPNTF SQGLKLLADA TSTPQDPGIS
401: WSKRAECGPN DDTGCVLTIN DIYLWLLGTF FLWFVLALYF DNITPNASGV RKSIFYFLKP GYWTGKGGNR VEEGGICSCI GSVPPVDHIT PDDEDVLEEE
501: TLVKQHSMEG LVDPNVAVQI RGLAKTYPGT TKFGCCKCKK TSPFHALKGL WMNIAKDQLF CLLGPNGAGK TTTINCLTGL FPVTGGDALI YGNSIRSSVG
601: MSNIRKMIGV CPQFDILWDA LSGEEHLKLF ASIKGLPPSS INSMVEKSLA EVKLTEAGKI RAGSYSGGMK RRLSVAVSLI GDPKLVFLDE PTTGMDPITR
701: RHVWDIIQET KKGRAIILTT HSMEEADILS DRIGIMAKGR LRCIGTSIRL KSRFGTGFIA NISFVESNNH NGEAGSDSRE PVKKFFKDHL KVKPIEENKA
801: FMTFVIPHDK ENLLTSFFAE LQDREEEFGI SDIQLGLATL EEVFLNIARK AELESAAVDG TMVTLDLTSG SSVEIPVGAR FIGIPGTETA ENPRGVMVEV
901: YWQQDESGSL CISGHSTEMP IPENIPVTDP VAPGHGGVNL LGRRGRRQVQ GIVIDPEFAT FTRSGSTSSR RFSRSGSSRR FSS
101: SKVTQIVNAI MKNNPGRSIP IEKVRSFVDP EAVDTWLMAN PLLVPGALHF IERNATVISY GIQTNSTPEM NRGRFEDPTF KFQIPLQIAA EREIARSLIG
201: DPNFNWVVGF KEFPHPTIEA IVALDTIGPT FFLAVAMFGF VLQISSLITE KELKLRQAMT MMGVFDTAYW LSWLTWEGIL TAISALLTVL FGMMFQFDFF
301: LKNSFPVVFL LFMLFQFNLI GLAFMLSAFI SKSTSATTVG FFVFLVGFVT QLATSSGFPY AKKYSRMIRA LWSLFPPNTF SQGLKLLADA TSTPQDPGIS
401: WSKRAECGPN DDTGCVLTIN DIYLWLLGTF FLWFVLALYF DNITPNASGV RKSIFYFLKP GYWTGKGGNR VEEGGICSCI GSVPPVDHIT PDDEDVLEEE
501: TLVKQHSMEG LVDPNVAVQI RGLAKTYPGT TKFGCCKCKK TSPFHALKGL WMNIAKDQLF CLLGPNGAGK TTTINCLTGL FPVTGGDALI YGNSIRSSVG
601: MSNIRKMIGV CPQFDILWDA LSGEEHLKLF ASIKGLPPSS INSMVEKSLA EVKLTEAGKI RAGSYSGGMK RRLSVAVSLI GDPKLVFLDE PTTGMDPITR
701: RHVWDIIQET KKGRAIILTT HSMEEADILS DRIGIMAKGR LRCIGTSIRL KSRFGTGFIA NISFVESNNH NGEAGSDSRE PVKKFFKDHL KVKPIEENKA
801: FMTFVIPHDK ENLLTSFFAE LQDREEEFGI SDIQLGLATL EEVFLNIARK AELESAAVDG TMVTLDLTSG SSVEIPVGAR FIGIPGTETA ENPRGVMVEV
901: YWQQDESGSL CISGHSTEMP IPENIPVTDP VAPGHGGVNL LGRRGRRQVQ GIVIDPEFAT FTRSGSTSSR RFSRSGSSRR FSS
Arabidopsis Description
ABCA2ATH1 [Source:UniProtKB/TrEMBL;Acc:A0A178V6R6]
SUBAcon: [mitochondrion,plasma membrane]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.