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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:endoplasmic reticulum, plasma membrane, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033785.1-P Field mustard plasma membrane 99.58 99.58
CDX94927 Canola cytosol 11.36 89.92
CDX68441 Canola plasma membrane 89.17 89.17
CDY36930 Canola plasma membrane 86.41 86.41
CDY24156 Canola plasma membrane 86.31 86.31
AT3G47780.1 Thale cress plasma membrane 84.08 84.71
CDY02120 Canola cytosol, nucleus, plasma membrane 52.87 75.57
CDY36932 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 70.49 74.94
CDY31786 Canola cytosol, nucleus, plasma membrane 52.44 74.85
CDX77421 Canola plasma membrane 73.67 74.22
CDY24158 Canola plasma membrane 72.51 73.76
CDY39546 Canola plasma membrane 73.14 73.69
CDY24157 Canola plastid 72.51 71.82
CDY36931 Canola plastid 70.7 71.54
CDX68440 Canola cytosol, mitochondrion 10.3 69.78
CDY62599 Canola plasma membrane 62.74 68.01
KRH54520 Soybean plasma membrane, plastid 58.17 67.91
CDY02114 Canola plasma membrane 63.38 67.31
CDY23043 Canola cytosol, mitochondrion 36.52 67.19
CDY23039 Canola plasma membrane 63.06 66.89
CDY24573 Canola plasma membrane 11.25 66.67
Solyc03g113040.2.1 Tomato plastid 66.14 65.93
CDY23798 Canola nucleus, peroxisome, plasma membrane 26.75 65.62
CDY21797 Canola plasma membrane 61.78 64.38
Solyc03g113060.2.1 Tomato extracellular 64.23 64.09
KRH63384 Soybean plasma membrane 49.36 63.87
CDX77874 Canola plasma membrane 55.63 63.21
KRG88422 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 32.91 63.14
KRH56933 Soybean plasma membrane, plastid 62.63 62.17
Solyc06g070920.2.1 Tomato extracellular, plasma membrane 42.04 62.07
KRH03450 Soybean plasma membrane, plastid 62.0 61.22
TraesCS7A01G367700.1 Wheat plasma membrane 36.09 59.86
KXG25097 Sorghum plasma membrane 60.3 59.29
Os08t0398300-01 Rice plasma membrane 59.77 58.83
TraesCS1D01G345200.1 Wheat plasma membrane 59.34 58.72
TraesCS1A01G343000.1 Wheat plasma membrane 59.13 58.45
TraesCS1B01G356200.1 Wheat plasma membrane 58.7 58.09
HORVU1Hr1G075620.5 Barley plasma membrane 58.39 57.65
CDX68438 Canola endoplasmic reticulum, extracellular, plasma membrane 26.01 57.51
HORVU4Hr1G087670.8 Barley mitochondrion 58.28 57.19
Zm00001d050259_P002 Maize plasma membrane 59.55 57.01
TraesCS4B01G365000.1 Wheat plasma membrane 59.13 56.61
TraesCSU01G138200.1 Wheat plasma membrane 58.92 55.61
TraesCS3D01G368700.2 Wheat plasma membrane 56.48 54.96
OQU89360 Sorghum plasma membrane 55.31 54.96
TraesCS5A01G534100.3 Wheat cytosol 58.81 54.85
TraesCS5A01G193200.1 Wheat plasma membrane 54.99 54.76
TraesCS5D01G195700.1 Wheat plasma membrane 54.78 54.55
Zm00001d020208_P003 Maize plasma membrane 54.35 54.01
Solyc06g070950.1.1 Tomato plasma membrane 50.96 53.87
Os06t0589300-01 Rice plasma membrane 53.61 53.21
TraesCS7D01G355100.1 Wheat plastid 53.72 52.98
TraesCS5B01G188600.1 Wheat plasma membrane 53.4 52.95
EER89983 Sorghum plastid 53.5 52.83
HORVU5Hr1G056930.20 Barley plasma membrane 54.78 52.81
TraesCS7B01G260800.1 Wheat plastid 53.29 52.51
Zm00001d036927_P001 Maize plasma membrane, plastid 53.72 52.44
HORVU7Hr1G085680.2 Barley endoplasmic reticulum, peroxisome, plastid 53.61 50.96
GSMUA_Achr7P23890_001 Banana plasma membrane 61.68 49.66
CDX68439 Canola nucleus 8.28 49.37
GSMUA_Achr3P20510_001 Banana plasma membrane 60.08 48.25
CDY02119 Canola endoplasmic reticulum, plasma membrane, plastid 9.13 48.04
HORVU3Hr1G030470.1 Barley cytosol, extracellular, plasma membrane 7.43 41.67
HORVU6Hr1G043820.1 Barley cytosol, endoplasmic reticulum, plasma membrane 7.43 41.67
CDY23799 Canola cytosol, peroxisome, plasma membrane 8.92 41.18
HORVU4Hr1G039510.1 Barley cytosol 7.22 40.48
Solyc06g070930.2.1 Tomato plastid 11.68 40.15
CDY64180 Canola plasma membrane 16.67 25.04
CDX96058 Canola cytosol 7.01 25.0
CDY01873 Canola cytosol 6.9 24.62
CDY62594 Canola cytosol 11.89 24.51
CDY02116 Canola plasma membrane 21.55 24.17
CDY16404 Canola plastid 8.39 24.01
CDX69605 Canola plastid 6.9 23.72
CDY58413 Canola cytosol, plastid 6.9 23.72
CDY23042 Canola plasma membrane 23.57 23.69
CDY24159 Canola golgi, mitochondrion 23.57 23.69
CDY23040 Canola plasma membrane 23.78 23.48
CDY57805 Canola plastid 8.17 23.4
CDY23800 Canola plasma membrane 22.61 23.28
CDY36933 Canola golgi, mitochondrion 23.57 23.01
CDX68436 Canola plasma membrane 7.11 22.79
CDY52820 Canola cytosol, nucleus, plasma membrane 21.23 22.78
CDY02118 Canola plasma membrane 23.67 22.41
CDX68434 Canola plasma membrane 16.24 21.55
CDY02115 Canola extracellular, mitochondrion, plasma membrane, plastid 8.07 20.82
CDY62596 Canola cytosol, plasma membrane, vacuole 6.48 19.87
CDX68435 Canola mitochondrion, plastid 5.1 18.39
CDY39288 Canola cytosol 3.61 17.17
CDY35403 Canola mitochondrion, plasma membrane 20.38 10.32
CDY22536 Canola mitochondrion, plasma membrane 20.28 10.31
Protein Annotations
MapMan:24.1.3.2.1Gene3D:3.40.50.300GO:A0A078D1N4InterPro:AAA+_ATPaseInterPro:ABCAInterPro:ABC_transporter-like
InterPro:ABC_transporter_CSEnsemblPlants:CDX83025ProteinID:CDX83025ProteinID:CDX83025.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626
GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00138490001InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF12698
ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19229PANTHER:PTHR19229:SF141SMART:SM00382SUPFAM:SSF52540
TMHMM:TMhelixUniParc:UPI0004EE49F5SEG:seg:::
Description
BnaA01g20250D
Coordinates
chrLK031831:+:623591..628164
Molecular Weight (calculated)
105513.0 Da
IEP (calculated)
8.396
GRAVY (calculated)
0.012
Length
942 amino acids
Sequence
(BLAST)
001: MADPGTASFL TRANALLRKN LTYQKRNIWS NVRLIMIPFL LCVMLVALQI VFDTVVNNAD NNRCGCQCIV TNQNGNCLNE TCGIEFSSSD QAFFCPISSP
101: PRWPPLLQVP RPESRAVNTT FLPDMGLPDE TCRRTRTCPV TILFTGNNRS LGTSLFGNLL PSSVTVNISD PLQGLAYNVL GTEAESELTN YLDPGIASNL
201: SIYNIQSGCI SNAAFPFSFE EETLKFKKEL RCAQGLNLWR NNSREVNDVI FKGYRKGNPE GKINEIAAAY DLLNTDRNNF NVHIWYNSTY RNGTNDRPST
301: LLRVPGLVNL VSNAYLHFLQ GPGTKMLFEY VKEVPKLESK LRLDIASLIG PLFFTWVILL LFPVILSSLV YEKQERLRII MKMHGLGDGP YWMISYAYFL
401: SISMLYFIAL MIFGSAIGLK FFRINDYSIQ FTFYFLYVNL QIALCFLVSS IFSKVKTSTV SSYIYVFLSG LVGSFLLQFL IEDSSFPRGW IIVLELYPAF
501: SLFRGLYEFS QFSFRGNLRG ADGMKWKDFG DSAMDEVFII IIVEWFLALI AAYYIDKIVS SGKDPLFFLT NPFQKSPSMR RPSLQRQGSK VVVEMEKPDV
601: TQEIEKVEKL MLEPSTSHAI VCENLKKVYP GRDGNPPKLA VRGLSLAVPS GECFGMLGPN GAGKTSFINM MTGLLKPTSG TGLVRGLDIC NDMDRVYTSM
701: GVCPQHDLLW ETLTGREHLL FYGRLKNLKG SELIQAVEES LKSVNLFHGG VADKPAGKYS GGMKRRLSVA ISLIGNPKVV YMDEPSTGLD PASRKNLWTV
801: IKRAKQNTAI ILTTHSMEEA EFLCDRLGIF VDGSLQCIGN PKELKGRYGG SYVFTMTTSS EHEGNVERLI QDVSPNAKKI YHIAGTQKFE LPKEEVRISE
901: VFQAVEKAKS NFTVFAWGLA DTTLEDVFIK VARTGQAFNV FS
Best Arabidopsis Sequence Match ( AT3G47780.1 )
(BLAST)
001: MADPGPASFS TRANALLRKN LTYQKRNLWS NIRLIMIPFY LCILLVIIQI LFDTQVNNSA DNRCGCECIE RNRAGKCQRE LCGLEHSKPD QAFFCSIPRP
101: PLWPPLLQIP RPESRDVRGL RDDSCRRTGS CPVTILFTGN NRSLGTTVSE NLFTSSVSAN ASEILRTLAN NVLGTTVEAD FTNYLDPGIA SNLSIYNIQP
201: RCILNATFPF SFEQPPLKFE KELRCVQGSN LWTNTSKEVN DKIFKGYKKG NPEGKINEIA AAYDLLNTDR NNFNVHIWYN STYKDDAGNR LIKLIRVPRS
301: VNLVSNAYLQ FLQGPGTRML FEYVKEMPKP ETSLRLDIAS LIGPLFFTWV ILLLFPVILS SLVYEKQQHL RIIMKMHGLG DGPYWMISYA YFLTISVLYV
401: ICLMIFGSAI GLKFFRLNSY SIQFVFYFLY LNLQIALAFL VSSVFSKVKT STVASYIYVF GSGLLGLFLL NFLIEDSSFP RGWIIVMELY PGFSLYRGLY
501: ELAQFAFRGN LRGEDGMKWK DFGDSAMDDV FYIIVVEWFL ALIAAYYIDK ISSSGRNPLF FLQNPFKKSP SLRRPSLQRQ GSKVSVDMEK PDVTHESKKV
601: ERLMLESSTS HAIVCDNLKK VYPGRDGNPP KLAVRGLSLA VPSGECFGML GPNGAGKTSF INMMTGLLKP TSGTALVQGL DICNDMDRVY TSMGVCPQHD
701: LLWETLTGRE HLLFYGRLKN LKGADLNQAV EESLKSVNLF HGGVADKPAG KYSGGMKRRL SVAISLIGNP KVVYMDEPST GLDPASRKNL WTVIKRAKQN
801: TAIILTTHSM EEAEFLCDRL GIFVDGGLQC IGNPKELKGR YGGSYVFTMT TSSEHEQNVE KLIKDVSPNA KKIYHIAGTQ KFELPKEEVR ISEVFQAVEK
901: AKSNFTVFAW GLADTTLEDV FIKVVRNGQA FNVFS
Arabidopsis Description
ABCA7ABC transporter A family member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.