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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:endoplasmic reticulum, plasma membrane, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX77421 Canola plasma membrane 98.72 98.72
CDX94927 Canola cytosol 12.51 98.32
CDY36932 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 71.98 75.96
CDY36930 Canola plasma membrane 76.04 75.48
CDY24158 Canola plasma membrane 74.22 74.95
CDY24156 Canola plasma membrane 75.4 74.84
AT3G47770.2 Thale cress endoplasmic reticulum, golgi, plasma membrane, plastid 73.05 73.76
CDX83025 Canola plasma membrane 73.69 73.14
CDX68441 Canola plasma membrane 73.58 73.04
CDX68440 Canola cytosol, mitochondrion 10.7 71.94
CDY24157 Canola plastid 71.98 70.77
CDY36931 Canola plastid 70.16 70.46
CDY02120 Canola cytosol, nucleus, plasma membrane 49.41 70.11
CDY31786 Canola cytosol, nucleus, plasma membrane 48.98 69.39
KRH54520 Soybean plasma membrane, plastid 57.11 66.17
CDY24573 Canola plasma membrane 11.23 66.04
CDY02114 Canola plasma membrane 61.71 65.05
CDY23039 Canola plasma membrane 61.6 64.86
CDX68438 Canola endoplasmic reticulum, extracellular, plasma membrane 29.52 64.79
CDY21797 Canola plasma membrane 61.07 63.16
KRH63384 Soybean plasma membrane 48.98 62.91
CDY23043 Canola cytosol, mitochondrion 34.44 62.89
KRG88422 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 32.94 62.73
CDY62599 Canola plasma membrane 58.29 62.72
Solyc03g113040.2.1 Tomato plastid 63.21 62.54
CDX77874 Canola plasma membrane 55.19 62.24
TraesCS7A01G367700.1 Wheat plasma membrane 37.11 61.09
Solyc03g113060.2.1 Tomato extracellular 61.28 60.7
KRH56933 Soybean plasma membrane, plastid 61.28 60.38
Solyc06g070920.2.1 Tomato extracellular, plasma membrane 41.07 60.19
CDY23798 Canola nucleus, peroxisome, plasma membrane 24.71 60.16
KRH03450 Soybean plasma membrane, plastid 60.53 59.33
KXG25097 Sorghum plasma membrane 56.9 55.53
TraesCS1D01G345200.1 Wheat plasma membrane 55.62 54.62
TraesCS1A01G343000.1 Wheat plasma membrane 55.62 54.56
Os08t0398300-01 Rice plasma membrane 55.62 54.34
TraesCS1B01G356200.1 Wheat plasma membrane 55.08 54.1
HORVU4Hr1G087670.8 Barley mitochondrion 55.4 53.96
HORVU1Hr1G075620.5 Barley plasma membrane 54.76 53.67
Zm00001d050259_P002 Maize plasma membrane 56.15 53.35
Os06t0589300-01 Rice plasma membrane 54.01 53.21
TraesCS7D01G355100.1 Wheat plastid 54.33 53.19
TraesCS7B01G260800.1 Wheat plastid 54.33 53.14
EER89983 Sorghum plastid 54.12 53.04
TraesCS4B01G365000.1 Wheat plasma membrane 55.51 52.74
OQU89360 Sorghum plasma membrane 53.48 52.74
Zm00001d020208_P003 Maize plasma membrane 53.48 52.74
TraesCS5D01G195700.1 Wheat plasma membrane 53.05 52.43
Solyc06g070950.1.1 Tomato plasma membrane 49.95 52.41
TraesCS5A01G193200.1 Wheat plasma membrane 52.94 52.33
TraesCSU01G138200.1 Wheat plasma membrane 55.62 52.1
Zm00001d036927_P001 Maize plasma membrane, plastid 53.69 52.02
HORVU7Hr1G085680.2 Barley endoplasmic reticulum, peroxisome, plastid 54.44 51.36
TraesCS5A01G534100.3 Wheat cytosol 55.4 51.29
TraesCS3D01G368700.2 Wheat plasma membrane 52.73 50.93
HORVU5Hr1G056930.20 Barley plasma membrane 53.05 50.77
TraesCS5B01G188600.1 Wheat plasma membrane 51.55 50.74
CDX68439 Canola nucleus 8.24 48.73
GSMUA_Achr7P23890_001 Banana plasma membrane 57.33 45.81
GSMUA_Achr3P20510_001 Banana plasma membrane 57.01 45.44
CDY02119 Canola endoplasmic reticulum, plasma membrane, plastid 8.13 42.46
HORVU6Hr1G043820.1 Barley cytosol, endoplasmic reticulum, plasma membrane 7.49 41.67
HORVU3Hr1G030470.1 Barley cytosol, extracellular, plasma membrane 7.38 41.07
HORVU4Hr1G039510.1 Barley cytosol 7.27 40.48
Solyc06g070930.2.1 Tomato plastid 10.8 36.86
CDY23799 Canola cytosol, peroxisome, plasma membrane 8.02 36.76
CDY64180 Canola plasma membrane 16.79 25.04
CDY58413 Canola cytosol, plastid 7.17 24.45
CDX69605 Canola plastid 7.17 24.45
CDY62594 Canola cytosol 11.76 24.07
CDX96058 Canola cytosol 6.74 23.86
CDY01873 Canola cytosol 6.74 23.86
CDX68436 Canola plasma membrane 7.49 23.81
CDY02116 Canola plasma membrane 21.18 23.57
CDY23800 Canola plasma membrane 22.78 23.28
CDY23042 Canola plasma membrane 23.21 23.16
CDY16404 Canola plastid 8.13 23.1
CDY23040 Canola plasma membrane 23.42 22.96
CDY24159 Canola golgi, mitochondrion 22.99 22.95
CDY57805 Canola plastid 8.02 22.8
CDY52820 Canola cytosol, nucleus, plasma membrane 21.07 22.44
CDY36933 Canola golgi, mitochondrion 22.89 22.18
CDY02118 Canola plasma membrane 23.32 21.91
CDX68434 Canola plasma membrane 16.26 21.41
CDY02115 Canola extracellular, mitochondrion, plasma membrane, plastid 7.81 20.0
CDY62596 Canola cytosol, plasma membrane, vacuole 6.31 19.22
CDX68435 Canola mitochondrion, plastid 4.92 17.62
CDY39288 Canola cytosol 3.21 15.15
CDY35403 Canola mitochondrion, plasma membrane 20.11 10.11
CDY22536 Canola mitochondrion, plasma membrane 19.89 10.04
Protein Annotations
MapMan:24.1.3.2.1Gene3D:3.40.50.300GO:A0A078HPQ2UniProt:A0A078HPQ2InterPro:AAA+_ATPaseInterPro:ABCA
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDY39546ProteinID:CDY39546ProteinID:CDY39546.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887
GO:GO:0042626GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00068088001InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005
PFAM:PF12698ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19229PANTHER:PTHR19229:SF141SMART:SM00382
SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0004EDB9B8SEG:seg::
Description
BnaC07g07140DBnaC07g07140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HPQ2]
Coordinates
chrLK032451:-:126452..131375
Molecular Weight (calculated)
105447.0 Da
IEP (calculated)
8.999
GRAVY (calculated)
0.006
Length
935 amino acids
Sequence
(BLAST)
001: MADSDPASFL TQANAILRKN LTYQKRNVWS NVRLIMIPFY LCLVLVGIQA LFDSQVSNSL DNQCGCKCIH KTGDETCQMV CGVEYSTRDQ AVFCAIPNPQ
101: PWPPLILIPL PRNRVVDANL TNVSCKQRNN CPVTILFTGN NQSLGATLSR NLFRRSFPMN YSDLLFSLAD NVLATTYKGS PTNYLDAGIV SDRFIYNIQS
201: RCTPNSKVSF SLGQSPLNFT KEMRCVQGLN LWINSSREIN DDIFKGYLKG NSEGMINEIV AAYDLLDTNR TNFNVNIWYN ATYQDDSGNM PPKLLRVPRL
301: VSLMSNAYLQ YLKSPRTRML LEFVKEMPKP ETKLRLDIAS LIGAVFFTWV ILLLFPVILT SLVYEKQQRL RIIMKMHGLG DGPYWMITYA YFLAISTSYV
401: ICLMIFGSAI GLNFFRLNDY SIHFVFYFLY INLQISLAFL ASSAFSNVET ASVVAYIYVF GSGLLGWFLF QFLIEELSFP RRWIFVMELY PGFSLFRGLY
501: EFAQYAFQGS LTRRQGMKWK DISDSSMDKV FYIIIVEWFF SLIAAYYIDK MSSSGKDLLF FLKNPFNKYL LPQRPSLQKQ VSAVSVEMEK LDVTQESEKV
601: QKLMRAQRTS HAIVCNTMKK VYPGRDGNPP KMAVRGLSLA VPSGECFGML GPNGAGKTSF INMMTGLVKP TSGSAFVQGL DICTDMDRVY TSMGVCPQHD
701: LLWETLSGRE HLFFYGRLKS LKDSKLDQAV EESLKSVNLL HGGVADKPAG KYSGGMKRRL SVAISLIGSP KVVYMDEPST GLDPASRMNL WTVIKRAKTN
801: TAIILTTHSM EEAEFLCDRL GIFVDGRLQC IGNPKELKGR YGGSYVLTMT TASEHEKDVE VLVQDVSPNA KKIYNIAGTQ KFEIPKEEVR ISEVFQAVEK
901: AKSTLKVFAW GLADTTLEDV FIKVARSGQA FNVFS
Best Arabidopsis Sequence Match ( AT3G47740.1 )
(BLAST)
001: MADSGPASFW TRANAILRKN LTYQKRNIWS NVRLIMIPFY LCIVLVFIQA LFDSQVNNSL DNQCGCQCID KLGDGKCQMT CGLEYSTRDQ GFFCAIPKPQ
101: PWPPLILIPR PEYRALDANF TNDSCRRKNS CPVTILFTGN NHSLGAVLSR NLLRRPFAMN SSDLLFSLAN NVLATTFKGS ATNYLDAGIV SDGSIYNIQP
201: RCPPNSNFSI SIGQSPLNFT KDMRCVQGLN LWRNNSIEVN LELFEGYHKG NSDGMINEIV AAYDLFDTNM TNFNVNIWFN ATYKDEARNQ PYKVVRVPRL
301: VNWVSNAYLQ YLQGPRTKML FEFVKEMPKP ETKLRLDIAS LIGPIFFTWV ILLLLPVILN SLVYEKQQRL RIIMKMHGLG DGPYWIISYA YFLALSTFYI
401: IFLMIFGSVI GLKFFLLNDF SLQFSFYFVY INLQISIAFL LSSAFSKVET ASVAAYLYVF GSGLLGMFLF QFLLEGLSFP RRWIFVMELY PGFSLYRGLY
501: EFSQNAYQGN LNGKDGMKWK YFSDNAIDEV FYIIIVEWFV ALIATYYIDK MSSSGKDLLF FLKNQNPFKI SHSLQKQVSA ISVEMEKLDV IHESEKVAQL
601: MLESSTSHAI VCDKLRKVYP GRDGNPPKKA VRVLSLAVPS GECFGMLGPN GAGKTSFINM MTGLVKPTSG AAFVQGLDIC KDMDRVYTSM GVCPQHDLLW
701: ETLTGREHLL FYGRLKNLKG VDLNQAVEES LRSVNLFHGG VADKPAGKYS GGMKRRLSVA ISLIGNPKVV YMDEPSTGLD PASRKNLWTV IKNAKRHTAI
801: ILTTHSMEEA EFLCDRLGIF VDGRLQCIGN PKELKGRYGG SYVLTMTTSS EHEKDVEMLV QEVSPNVKKI YHIAGTQKFE IPKDEVRISE VFQVVEKAKS
901: NFKVFAWGLA DTTLEDVFIK VARTAQAFNV FS
Arabidopsis Description
ABCA3ABC transporter A family member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEH6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.