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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 2
  • endoplasmic reticulum 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:endoplasmic reticulum, golgi, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY24157 Canola plastid 96.67 94.64
Bra018114.1-P Field mustard cytosol, peroxisome, plasma membrane 63.16 93.48
CDX94927 Canola cytosol 10.96 85.71
AT3G47750.1 Thale cress mitochondrion, plasma membrane 76.48 75.99
AT3G47760.3 Thale cress plasma membrane 76.37 75.96
CDY36932 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 71.43 75.06
CDY24158 Canola plasma membrane 74.22 74.62
CDY36930 Canola plasma membrane 73.04 72.19
CDY24156 Canola plasma membrane 72.5 71.66
CDY02120 Canola cytosol, nucleus, plasma membrane 50.16 70.86
CDX83025 Canola plasma membrane 71.54 70.7
CDX77421 Canola plasma membrane 70.78 70.48
CDY39546 Canola plasma membrane 70.46 70.16
CDX68441 Canola plasma membrane 70.68 69.85
CDY31786 Canola cytosol, nucleus, plasma membrane 49.52 69.85
KRH54520 Soybean plasma membrane, plastid 56.28 64.93
CDX68440 Canola cytosol, mitochondrion 9.67 64.75
CDY62599 Canola plasma membrane 58.86 63.06
CDY02114 Canola plasma membrane 59.51 62.46
CDY23039 Canola plasma membrane 59.08 61.94
CDY23043 Canola cytosol, mitochondrion 34.05 61.91
KRH63384 Soybean plasma membrane 47.91 61.26
Solyc03g113040.2.1 Tomato plastid 61.65 60.74
CDY21797 Canola plasma membrane 58.11 59.85
Solyc03g113060.2.1 Tomato extracellular 60.37 59.53
CDX77874 Canola plasma membrane 52.95 59.47
CDY23798 Canola nucleus, peroxisome, plasma membrane 24.27 58.85
KRG88422 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 30.93 58.66
Solyc06g070920.2.1 Tomato extracellular, plasma membrane 40.06 58.46
CDY24573 Canola plasma membrane 9.88 57.86
KRH56933 Soybean plasma membrane, plastid 58.75 57.64
KRH03450 Soybean plasma membrane, plastid 58.54 57.13
TraesCS7A01G367700.1 Wheat plasma membrane 34.69 56.87
CDX68438 Canola endoplasmic reticulum, extracellular, plasma membrane 25.35 55.4
KXG25097 Sorghum plasma membrane 55.32 53.76
TraesCS1A01G343000.1 Wheat plasma membrane 53.81 52.57
TraesCS1D01G345200.1 Wheat plasma membrane 53.71 52.52
Os08t0398300-01 Rice plasma membrane 53.81 52.35
TraesCS1B01G356200.1 Wheat plasma membrane 53.49 52.31
HORVU4Hr1G087670.8 Barley mitochondrion 53.81 52.19
TraesCS4B01G365000.1 Wheat plasma membrane 54.35 51.42
HORVU1Hr1G075620.5 Barley plasma membrane 52.52 51.26
Zm00001d050259_P002 Maize plasma membrane 54.03 51.12
Solyc06g070950.1.1 Tomato plasma membrane 48.55 50.73
TraesCS5D01G195700.1 Wheat plasma membrane 51.45 50.63
OQU89360 Sorghum plasma membrane 51.56 50.63
TraesCS5A01G193200.1 Wheat plasma membrane 51.34 50.53
Zm00001d020208_P003 Maize plasma membrane 51.45 50.53
TraesCSU01G138200.1 Wheat plasma membrane 54.03 50.4
TraesCS7D01G355100.1 Wheat plastid 51.34 50.05
TraesCS7B01G260800.1 Wheat plastid 51.34 50.0
TraesCS5A01G534100.3 Wheat cytosol 54.03 49.8
Os06t0589300-01 Rice plasma membrane 50.59 49.63
HORVU5Hr1G056930.20 Barley plasma membrane 51.77 49.33
TraesCS5B01G188600.1 Wheat plasma membrane 50.27 49.26
EER89983 Sorghum plastid 50.16 48.95
TraesCS3D01G368700.2 Wheat plasma membrane 50.7 48.76
Zm00001d036927_P001 Maize plasma membrane, plastid 50.38 48.6
HORVU7Hr1G085680.2 Barley endoplasmic reticulum, peroxisome, plastid 51.45 48.34
CDX68439 Canola nucleus 7.84 46.2
GSMUA_Achr7P23890_001 Banana plasma membrane 56.61 45.04
GSMUA_Achr3P20510_001 Banana plasma membrane 54.89 43.56
CDY02119 Canola endoplasmic reticulum, plasma membrane, plastid 7.95 41.34
HORVU6Hr1G043820.1 Barley cytosol, endoplasmic reticulum, plasma membrane 6.66 36.9
HORVU3Hr1G030470.1 Barley cytosol, extracellular, plasma membrane 6.66 36.9
Solyc06g070930.2.1 Tomato plastid 10.74 36.5
CDY23799 Canola cytosol, peroxisome, plasma membrane 7.95 36.27
HORVU4Hr1G039510.1 Barley cytosol 6.44 35.71
CDY62594 Canola cytosol 12.35 25.16
CDY64180 Canola plasma membrane 16.76 24.88
CDY58413 Canola cytosol, plastid 7.2 24.45
CDX69605 Canola plastid 7.2 24.45
CDY02116 Canola plasma membrane 21.48 23.81
CDY24159 Canola golgi, mitochondrion 23.95 23.8
CDY23042 Canola plasma membrane 23.74 23.59
CDY23800 Canola plasma membrane 23.09 23.5
CDY23040 Canola plasma membrane 23.95 23.38
CDX68436 Canola plasma membrane 7.3 23.13
CDY36933 Canola golgi, mitochondrion 23.95 23.11
CDY16404 Canola plastid 8.06 22.8
CDX96058 Canola cytosol 6.44 22.73
CDY01873 Canola cytosol 6.44 22.73
CDY52820 Canola cytosol, nucleus, plasma membrane 21.27 22.55
CDY02118 Canola plasma membrane 23.85 22.31
CDY57805 Canola plastid 7.84 22.19
CDX68434 Canola plasma membrane 16.54 21.69
CDX68435 Canola mitochondrion, plastid 5.69 20.31
CDY02115 Canola extracellular, mitochondrion, plasma membrane, plastid 7.84 20.0
CDY62596 Canola cytosol, plasma membrane, vacuole 6.34 19.22
CDY39288 Canola cytosol 3.22 15.15
CDY35403 Canola mitochondrion, plasma membrane 19.33 9.68
CDY22536 Canola mitochondrion, plasma membrane 19.23 9.66
Protein Annotations
MapMan:24.1.3.2.1Gene3D:3.40.50.300GO:A0A078HGN3UniProt:A0A078HGN3InterPro:AAA+_ATPaseInterPro:ABCA
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDY36931ProteinID:CDY36931ProteinID:CDY36931.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887
GO:GO:0042626GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00063073001InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005
ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19229PANTHER:PTHR19229:SF141SMART:SM00382SUPFAM:SSF52540
TMHMM:TMhelixUniParc:UPI0004EE006ASEG:seg:::
Description
BnaA06g17160DBnaA06g17160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HGN3]
Coordinates
chrLK032387:-:206063..210762
Molecular Weight (calculated)
105213.0 Da
IEP (calculated)
8.650
GRAVY (calculated)
-0.086
Length
931 amino acids
Sequence
(BLAST)
001: MVTNPVPASF LTRANALFRK NLTFQKRNIW SNVRLIVIPL YLCVLLVGIQ ALFNTQFNNS VDNRCGCKCI DEKNGDGKCE RKSCGPEYSS PNQAFFCAFP
101: NPPPLPPLLH IPSSVLDSNS CTRNTRSCHV TILVTGNNHT LGATISRNLL PTYSTVNSSD DFLRNPAYNV LASSEILVVS IGTTSEAGNT NYLDPGTHSN
201: LSIFNIQARC TPNTTLSSFS FQQPLHEFHK AEERCVQGLN LWRNNSMEVN NEIFEGYQKE NHEESINEIV AAYDLLDTNR NNFNVTIWYN STYKFNIKDR
301: RVKLVQVPRS VNLVSNAYLH FLQGPGTKML FEYVKEVPKL ESRLRLDIAS LIGPLFFTWV ILLLFPVILT SLVYEKQQRL RIIMKMHGLG DGPYWMISYF
401: LAGLKFFLFN DYSFQLIFYF LYINLQISTA FLVSSAFSKV ETASVVSYIH IFGSGLLGAF LFQFLLEDVS FPRRWIFFME LYPGFSLYRG LYEFSIYAYQ
501: KNVTGRDGMK WKDFTNKVSI NAMDEVFYII IVEWFVALIA TYYIDQGSLS MEDSFSFLRK KFKQSLYPQK PRTSMQSSSV TVEMEKLDVT QERDKVEKMM
601: LEPSISHAIV CDNLKKVYPR RDGNPPKMAV RGLSLAVASK ECFGMLGPNG AGKTSFINTM TGLVKPTSGA AFVQGLDICK DMDKVYTSMG VCPQHDLLWE
701: TLTGREHLLF YGRLKNLKGS ELNQVVEDSL KNVNLFNGGV ADKPAGKYSG GMKRRLSVAI SLIGSPKVVY MDEPSTGLDP ASRMNLWTAI KRAKRHTAII
801: LTTHSMEEAE FLCDRLGIFV DGRLQCIGNP KELKARYGGS YVFTMTTSSE HEKDVEMLIL YLSPNAKKIY HIAGTQKFEI PKGEVGISKV FEAVEKAKSS
901: FTVFAWGLED TTLEDVFIKV ARGAHDFNVL S
Best Arabidopsis Sequence Match ( AT3G47770.2 )
(BLAST)
001: MAKPVAASFL TQANALFKKN LTYQKRNIWS NVRLIVIPLY LCVVLVCIQA VFDSLVNNSV DNQCGCRCAD DDKNGDGKCE IKSCGLQYSS QNQAVFCAFP
101: NPPPLLPLLH IPPSVNRDSC QRTGSCPVTI LVTGNNQSLG TTLSENLLST SFTVNSSSDL FLRNLAYNVL STTSETDYTN YRDPGIYSDL PIFNIQPQCT
201: PATILSLSFR QPPLEFHKEV RCVQGLNLWR NNSLEVNDEI FKGFRKENHE EIINEVAAAY DLLNTDRNKF NVTIWYYTTY KGDLQDWRVK YVRVPRSVNM
301: VSNAYLQFLR GPGTKILFDF VKEMPKQETR LRMDMASLIG PIFFTWVILL LFPVILTSLV YEKQQRLRII MKMHGLGDAP YWMISYAYFL AISTLYIVCL
401: MIFGSAIGLK FFRFNDYTIQ FMFYFLYINL QISIAFLVSS AFSKAVTASV VAYIYVFGSG LLGAFLFQFL IESLSFPRRW IFVMELYPGF SLYRGLYEFS
501: QYAFQRNLNG RDGMKWKDFR GSAMDEVFTI IIVEWVVALV ATYYIDRVSS SSKDTFAFLK NPFKLSPTPQ MLSFQKERSD VSVEMEKLDV IQEKETVKQL
601: IFERSKNHGI VCDNLKKVYQ GRDGNPPKLA VCGLSLAVPS GECFGMLGPN GAGKTSFINM MTGLVKPSSG SAFVQGLDIC KDMDKVYISM GVCPQHDLLW
701: ETLTGKEHLL FYGRLKNLKG HDLNQAVEES LKSVNLFHGG VADIPAGKYS GGMKRRLSVA ISLIGSPKVV YMDEPSTGLD PASRINLWTV IKRAKKHAAI
801: ILTTHSMEEA EFLCDRLGIF VDGRLQCIGN PKELKGRYGG SYVLTITTSP EHEKDVETLV QEVSSNARKI YHIAGTQKFE FPKEEVRISE VFQAVENAKR
901: NFTVFAWGFA DTTLEDVFIK VAKTGL
Arabidopsis Description
ABCA6ABC transporter A family member 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT6]
SUBAcon: [endoplasmic reticulum,golgi,plastid,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.