CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
endoplasmic reticulum 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d036927_P001	Maize	plasma membrane, plastid	94.97	93.89
TraesCS7A01G367700.1	Wheat	plasma membrane	50.94	85.56
Os06t0589300-01	Rice	plasma membrane	83.12	83.56
TraesCS7D01G355100.1	Wheat	plastid	82.18	82.09
TraesCS7B01G260800.1	Wheat	plastid	81.76	81.59
HORVU7Hr1G085680.2	Barley	endoplasmic reticulum, peroxisome, plastid	81.76	78.71
HORVU3Hr1G030470.1	Barley	cytosol, extracellular, plasma membrane	12.58	71.43
HORVU6Hr1G043820.1	Barley	cytosol, endoplasmic reticulum, plasma membrane	12.47	70.83
HORVU4Hr1G039510.1	Barley	cytosol	11.84	67.26
CDX94927	Canola	cytosol	8.07	64.71
PGSC0003DMT400083070	Potato	cytosol	7.76	59.68
VIT_17s0000g05860.t01	Wine grape	plasma membrane, plastid	58.6	58.9
KRH54520	Soybean	plasma membrane, plastid	49.37	58.36
Solyc03g113040.2.1	Tomato	plastid	56.6	57.14
CDY02120	Canola	cytosol, nucleus, plasma membrane	39.41	57.06
KRH63384	Soybean	plasma membrane	43.29	56.73
CDY31786	Canola	cytosol, nucleus, plasma membrane	39.2	56.67
KXG25097	Sorghum	plasma membrane	56.71	56.47
Solyc03g113060.2.1	Tomato	extracellular	55.77	56.36
Bra018114.1-P	Field mustard	cytosol, peroxisome, plasma membrane	37.11	56.28
Solyc06g070920.2.1	Tomato	extracellular, plasma membrane	37.63	56.27
AT3G47790.1	Thale cress	plasma membrane	52.2	55.27
OQU89360	Sorghum	plasma membrane	54.72	55.06
CDX68440	Canola	cytosol, mitochondrion	7.97	54.68
CDX77421	Canola	plasma membrane	53.25	54.33
Bra019513.1-P	Field mustard	plasma membrane	50.73	54.2
CDY39546	Canola	plasma membrane	53.04	54.12
KRH56933	Soybean	plasma membrane, plastid	53.67	53.95
CDY36932	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	50.0	53.84
Bra033785.1-P	Field mustard	plasma membrane	52.94	53.61
AT3G47780.1	Thale cress	plasma membrane	52.52	53.58
AT3G47760.3	Thale cress	plasma membrane	52.52	53.53
Bra018113.1-P	Field mustard	plasma membrane	52.83	53.5
CDX68441	Canola	plasma membrane	52.83	53.5
CDX83025	Canola	plasma membrane	52.83	53.5
AT3G47750.1	Thale cress	mitochondrion, plasma membrane	52.52	53.47
CDY21797	Canola	plasma membrane	50.63	53.43
CDY36930	Canola	plasma membrane	52.73	53.4
CDY24156	Canola	plasma membrane	52.73	53.4
KRG88422	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	27.46	53.36
AT3G47740.1	Thale cress	plasma membrane	52.1	53.33
KRH03450	Soybean	plasma membrane, plastid	53.25	53.25
Bra015049.1-P	Field mustard	plasma membrane	49.69	53.08
CDY24158	Canola	plasma membrane	51.47	53.02
Bra018115.1-P	Field mustard	plasma membrane	51.36	52.92
AT3G47770.2	Thale cress	endoplasmic reticulum, golgi, plasma membrane, plastid	50.94	52.48
CDX77874	Canola	plasma membrane	45.49	52.35
AT5G61700.1	Thale cress	plasma membrane	49.58	51.58
Solyc06g070950.1.1	Tomato	plasma membrane	48.11	51.52
AT5G61740.1	Thale cress	plasma membrane	49.06	51.49
CDY62599	Canola	plasma membrane	46.65	51.21
VIT_12s0055g00730.t01	Wine grape	extracellular	6.81	51.18
CDY02114	Canola	plasma membrane	47.06	50.62
CDY23043	Canola	cytosol, mitochondrion	27.15	50.59
CDY24157	Canola	plastid	50.31	50.47
CDY23039	Canola	plasma membrane	46.86	50.34
PGSC0003DMT400083071	Potato	plasma membrane	49.27	50.27
CDY36931	Canola	plastid	48.95	50.16
Bra012931.1-P	Field mustard	cytosol, peroxisome, plasma membrane	30.82	49.66
OQU80391	Sorghum	mitochondrion	46.96	47.81
OQU84622	Sorghum	cytosol, peroxisome, plasma membrane	35.64	47.75
CDY23798	Canola	nucleus, peroxisome, plasma membrane	18.97	47.14
Bra033786.1-P	Field mustard	cytosol, mitochondrion, nucleus	14.68	46.98
Bra012927.1-P	Field mustard	cytosol	30.19	46.83
VIT_18s0041g02240.t01	Wine grape	plasma membrane	35.32	45.79
EES04733	Sorghum	plasma membrane	45.28	45.33
KXG29778	Sorghum	plasma membrane	44.65	44.65
CDX68438	Canola	endoplasmic reticulum, extracellular, plasma membrane	19.08	42.72
OQU80389	Sorghum	mitochondrion, plasma membrane	46.44	41.4
CDX68439	Canola	nucleus	6.81	41.14
Solyc06g070930.2.1	Tomato	plastid	10.48	36.5
VIT_07s0095g00600.t01	Wine grape	extracellular	2.62	36.23
EES14950	Sorghum	mitochondrion, plasma membrane, plastid	23.38	23.2
KXG28389	Sorghum	plastid	6.18	21.69
EER90300	Sorghum	cytosol, endoplasmic reticulum, mitochondrion	5.87	20.9
EER96343	Sorghum	plastid	7.65	20.68

Protein Annotations

MapMan:24.1.3.2.1	Gene3D:3.40.50.300	EntrezGene:8079323	InterPro:AAA+_ATPase	InterPro:ABCA	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	UniProt:C5Z565	EnsemblPlants:EER89983	ProteinID:EER89983	ProteinID:EER89983.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0043231	GO:GO:0055085
InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF12698	ScanProsite:PS00211	PFscan:PS50893
PANTHER:PTHR19229	PANTHER:PTHR19229:SF141	SMART:SM00382	EnsemblPlantsGene:SORBI_3010G176800	SUPFAM:SSF52540	TMHMM:TMhelix
UniParc:UPI0001A89915	RefSeq:XP_002438616.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:51466678..51475957

Molecular Weight (calculated)

106385.0 Da

IEP (calculated)

8.783

GRAVY (calculated)

0.011

Length

954 amino acids

Sequence
(BLAST)

001: MEPPSAAARA AAAPRPPSFA SQTNALLRKN LIFQKRNRKG TIRLIIVPIY LCLIISVLQR VINNFLDKPK YRCGCKCIVV NGTGPCQNVC GIQYSTLDQA
101: PSCPIPNPPK WPALVQVPLP EYRAVQDSSG LFTGFPDESC RKTQSCTASI PFAGANRTLS NSIMQNLFTS SPLLNISDYT SISSHLLGTD VPGSSTGFVE
201: PAFISARPIY VLQPQCKSSD SVTIPITVGS VNAQKEIKCV QGLPLWRNSS ATINEETFQG YRKGKTAEGI NEIVMGYDFQ DSNEKHFNVL ALYNSTYENA
301: SFIPMPFALL RIPRSLNAVS NAYLQLIRGS GVNMLLDFTK EMPKQATRLT FDFSAVAGPL FFEWVVVLLF PVMLTYLVYE KQHKLRTMMK MHGLGDGPYW
401: IIYYMYFLIF STLYMIVFVI FGSVIGVNFF KINDYSIQFV FFFSFINLQI VLAFLASSFF SKVNTAQAIA YLYIFGSGLM AGYLIRNFIE GGKFPRHWIT
501: VLEIIPAFSL YRGLYELGQY AVRSSETGSP GMRWSDLNDH TNGMRDVLII IILEWLVLLP VAYYFDHASS VGHRSSLLSI IKHLLKDPTS RRITVNKIAD
601: KDVHIEMEKL DIIKERETVD QVLQQHTSGY AVICDDLKKV YRGKDGNPDK FAVQGVSLAL PYGECLGILG PNGAGKSSFI SMMIGFVKPT SGNAFVRGFS
701: IQNDMEKIYS SMGVCPQNDM LWETLTGREH LQFYGRLKGL SGSSLDLAVD ESLRSVNLLH GGAPDKQVKK YSGGMRRRLS VAISLIGDAK VVYMDEPSTG
801: LDPASRKSLW SAVKQAKQDR AIILTTHSME EAETLCDRLC IMVDGSLQCI GTPKELIARY GGYYVLTMTT LPEFEQEVEN LVRKLSPSSR KVYHLSGTQK
901: YELPKQEARI SDVFMAVESF KKRVEVQAWG LADTTMEDVF VKVAKGARSS EELS

Best Arabidopsis Sequence Match ( AT3G47780.1 )
(BLAST)

001: MADPGPASFS TRANALLRKN LTYQKRNLWS NIRLIMIPFY LCILLVIIQI LFDTQVNNSA DNRCGCECIE RNRAGKCQRE LCGLEHSKPD QAFFCSIPRP
101: PLWPPLLQIP RPESRDVRGL RDDSCRRTGS CPVTILFTGN NRSLGTTVSE NLFTSSVSAN ASEILRTLAN NVLGTTVEAD FTNYLDPGIA SNLSIYNIQP
201: RCILNATFPF SFEQPPLKFE KELRCVQGSN LWTNTSKEVN DKIFKGYKKG NPEGKINEIA AAYDLLNTDR NNFNVHIWYN STYKDDAGNR LIKLIRVPRS
301: VNLVSNAYLQ FLQGPGTRML FEYVKEMPKP ETSLRLDIAS LIGPLFFTWV ILLLFPVILS SLVYEKQQHL RIIMKMHGLG DGPYWMISYA YFLTISVLYV
401: ICLMIFGSAI GLKFFRLNSY SIQFVFYFLY LNLQIALAFL VSSVFSKVKT STVASYIYVF GSGLLGLFLL NFLIEDSSFP RGWIIVMELY PGFSLYRGLY
501: ELAQFAFRGN LRGEDGMKWK DFGDSAMDDV FYIIVVEWFL ALIAAYYIDK ISSSGRNPLF FLQNPFKKSP SLRRPSLQRQ GSKVSVDMEK PDVTHESKKV
601: ERLMLESSTS HAIVCDNLKK VYPGRDGNPP KLAVRGLSLA VPSGECFGML GPNGAGKTSF INMMTGLLKP TSGTALVQGL DICNDMDRVY TSMGVCPQHD
701: LLWETLTGRE HLLFYGRLKN LKGADLNQAV EESLKSVNLF HGGVADKPAG KYSGGMKRRL SVAISLIGNP KVVYMDEPST GLDPASRKNL WTVIKRAKQN
801: TAIILTTHSM EEAEFLCDRL GIFVDGGLQC IGNPKELKGR YGGSYVFTMT TSSEHEQNVE KLIKDVSPNA KKIYHIAGTQ KFELPKEEVR ISEVFQAVEK
901: AKSNFTVFAW GLADTTLEDV FIKVVRNGQA FNVFS

Arabidopsis Description

ABCA7ABC transporter A family member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.