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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 5
  • plasma membrane 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d050260_P001 Maize mitochondrion 85.27 81.28
HORVU1Hr1G075610.7 Barley extracellular, mitochondrion, plasma membrane 73.96 75.08
TraesCS1D01G345300.1 Wheat mitochondrion, plasma membrane 75.77 74.97
Os08t0398350-00 Rice cytosol 66.92 74.55
TraesCS1A01G343200.1 Wheat mitochondrion 74.71 74.39
TraesCS1B01G356300.1 Wheat mitochondrion 74.92 74.36
OQU80389 Sorghum mitochondrion, plasma membrane 67.02 58.69
KXG25097 Sorghum plasma membrane 55.5 54.28
OQU89360 Sorghum plasma membrane 54.54 53.9
OQU84622 Sorghum cytosol, peroxisome, plasma membrane 36.5 48.03
EER89983 Sorghum plastid 47.81 46.96
EES04733 Sorghum plasma membrane 44.08 43.34
KXG29778 Sorghum plasma membrane 43.76 42.98
KXG28389 Sorghum plastid 7.36 25.37
EES14950 Sorghum mitochondrion, plasma membrane, plastid 24.33 23.73
EER96343 Sorghum plastid 8.0 21.25
EER90300 Sorghum cytosol, endoplasmic reticulum, mitochondrion 5.98 20.9
Protein Annotations
MapMan:24.1.3.2.1Gene3D:3.40.50.300UniProt:A0A1Z5RAC5InterPro:AAA+_ATPaseInterPro:ABCAInterPro:ABC_transporter-like
InterPro:ABC_transporter_CSGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085InterPro:IPR003439EnsemblPlants:OQU80391
ProteinID:OQU80391ProteinID:OQU80391.1ProteinID:OQU80392.1InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF12698
ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19229PANTHER:PTHR19229:SF141SMART:SM00382EnsemblPlantsGene:SORBI_3007G120200
SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI000B42385DSEG:seg::
Description
hypothetical protein
Coordinates
chr7:+:52064980..52072027
Molecular Weight (calculated)
105345.0 Da
IEP (calculated)
9.895
GRAVY (calculated)
0.036
Length
937 amino acids
Sequence
(BLAST)
001: MESRRRSRGL ARFSRQVHAL FLKNLSFQRR NARTNAAIAA FPALLCVLLV TIQRVVDSEL ERPPFRCGCV GTECGIQYST PIQALACAVP APPRWPALVQ
101: VPPTEARALT RLHPRPCKAS EKSCPATVLL TGQNRQLAQG LGNLLFPPVP PQYGLMPAAS NSSDYLDLFS TVVPGSSSLP AHVLFIEPGL VPNETLYLLQ
201: PKCLSESRNI SGHFDGIPME SDMQCVQALS LWCDNSSVIN NHMFKGYKGG NKRRRSNEFL AGYDFLDTNK RRFHIYVWYN SSFSRDNGHH SMTVLRVSRL
301: VNMASTAYLN FLKGENAEMR LEFLKEMPKA AVKTRLDFTT LLDALFFTWT VQLLLPVILT YLVYEKQQRL RLMMKMHGLK DAPYWLVSYA YFLALSAAYM
401: MFFIIFGSII GLVIFRLNSY IIQSLFYFVC INLQIMSAFL LATFFSSVKT ASVIGYMYVF GSSLLGEALL KIFIEDATFP RHWLVIMELV PGFSMYRGIY
501: ELSEYAAAGR NMGKPGMRWV DLNDPINGMK DVLVLMSIEW IILLVVAFLL DHRPAWQPLF LFGFLSTKHS SPSQKPIKLK RQSRRVHVYA TKPDVSLERK
601: VVKRLLKDMD MRNMIICHNL KKVYPGKNGN PDKHAVKGLS LALRKGQCFG MLGPNGAGKT SFINMMIGLV KPTYGTAYIH GMDLRTDMNE IYTNIGVCPQ
701: HDLLWEPLTG REHLMFFGRM KNLTGAALTQ AVEDSLKSVN LFHSGFGDKS VSKYSGGMKR RLSVAIALIG NPKVVYMDEP STGLDSRSRN DLWNIIKRAK
801: KDCTIILTTH SMEEAEELCD RIGIFINGNF QCIGTPKELK VRYGGTRILT ITTSPEHEEA VELIVSRLSP GYTRIYSVSG TQKFALPRRE VGLGCVFGAV
901: EVARRAFPVL GWGVADATLE DVFVRVAKEA RAFHVLS
Best Arabidopsis Sequence Match ( AT3G47790.1 )
(BLAST)
001: MADSSPASFL TQADALLRKN LVFQKRNIWS NIRLITIPFF LCLLLLVIQM LFDTQFNDVH GQCGCNEKTC GLRYSTSEQA AFCAIPNPPQ WTPLLQIPAP
101: EYRAAIPYPS HTSPATFLFT GNNQSLGNIL MGNMYSNSSG FDGDLAYYVL GSSSFPAYTN HMDSAFISDL PIYNIQHECS PNSSFSILIH QSPLAFPKEV
201: NCVQGLNLWR NSSSDVNNEL FKGYRKGNPD KKINEFAGAF DFQNTNGNNL NVSVWYNSTY KNDTVVRPMA LIRVPRLVNL ASNAYLEFLK GSETKILFEY
301: VKEMPKPETK LSLDIASLIG PLFFTWVILL LFPVILTTLV YEKQQRLRIM MKMHGLGDVP YWIVSYTYFL LISILYMLCF AIFGSLIGLN FFRLNDYSIQ
401: LVFFFICINL QISVAFLASA MFSDVKTATV IAYIYVFGTG LLGIFLFQFF LEDPLFPRGW IIAMELYPGF SLYRGLYELS QSAFAGDYRG IDGMKWRDFG
501: NGMKEVTCIM LIEWLLLLGL AYYIDQIIYS RKHPLFFLLQ STSKKKQHFS DNKISKVVVE MEKPDVCRER EKVEQCLLKS TRDSAVLCNN LKKVYSGKDG
601: NPQKLAVRGL SLALPQGECF GMLGPNGAGK TSFINMMTGI IKPSSGTAFV QGLDILTDMD RIYTTIGVCP QHDLLWEKLS GREHLLFYGR LKNLKGSVLT
701: QAVEESLRSV NLFHGGIGDK QVSKYSGGMK RRLSVAISLI GSPKVVYMDE PSTGLDPASR KSLWDVVKRA KRKGAIILTT HSMEEAEILC DRIGIFVDGS
801: LQCIGNPKEL KSRYGGSYVL TVTTSEEHEK EVEQLVHNIS TNAKKIYRTA GTQKFELPKQ EVKIGEVFKA LEKAKTMFPV VAWGLADTTL EDVFIKVAQT
901: S
Arabidopsis Description
ABCA8ABC transporter A family member 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPK0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.