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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • golgi 1
  • mitochondrion 2
  • plasma membrane 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d016395_P001 Maize plasma membrane, plastid 73.58 79.77
OQU84622 Sorghum cytosol, peroxisome, plasma membrane 49.27 66.01
EES04733 Sorghum plasma membrane 54.93 54.98
KXG25097 Sorghum plasma membrane 47.59 47.39
OQU89360 Sorghum plasma membrane 45.7 45.99
EER89983 Sorghum plastid 44.65 44.65
OQU80391 Sorghum mitochondrion 42.98 43.76
OQU80389 Sorghum mitochondrion, plasma membrane 40.88 36.45
KXG28389 Sorghum plastid 7.23 25.37
EES14950 Sorghum mitochondrion, plasma membrane, plastid 24.0 23.83
EER90300 Sorghum cytosol, endoplasmic reticulum, mitochondrion 6.29 22.39
EER96343 Sorghum plastid 7.65 20.68
Protein Annotations
MapMan:24.1.3.2.1Gene3D:3.40.50.300UniProt:A0A194YNG7InterPro:AAA+_ATPaseInterPro:ABCAInterPro:ABC_transporter-like
InterPro:ABC_transporter_CSGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085InterPro:IPR003439EnsemblPlants:KXG29778
ProteinID:KXG29778ProteinID:KXG29778.1InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF12698ScanProsite:PS00211
PFscan:PS50893PANTHER:PTHR19229PANTHER:PTHR19229:SF127SMART:SM00382EnsemblPlantsGene:SORBI_3004G089400SUPFAM:SSF52540
TMHMM:TMhelixUniParc:UPI0007F24805SEG:seg:::
Description
hypothetical protein
Coordinates
chr4:+:7586606..7593793
Molecular Weight (calculated)
106337.0 Da
IEP (calculated)
6.645
GRAVY (calculated)
0.045
Length
954 amino acids
Sequence
(BLAST)
001: MGANYLAQTN ALFRKNLVIQ RRNHRSNCCL ICFPLLICVL LGGVQLIVAI AYFTSSAHRA PRTDCGYCAT STNTSSTDTV GGLVCPTQCP LPIAPKWPPV
101: LQLPPAPDDL DDFGSSAAST NLTAADSITR AKAEPPAATF LVTGTNRSFA ERVMSNMLPK HDDELKSAAD ISTIADFALG TDAMHFISNG AEELGSDFDH
201: RNHIFFLQSN CTPNATLSFP VQEGRSNFTK DAGCIKGLFL WREDSSVINS ESYRVYYKED KQANQIASAY DLTSSNLNKF NLIVSYNSTY KGATQLSLSL
301: SSLSFSPILL RVPRLLNLVS NAYLQLRGNG TKMQFEFIKD MPRVAQQELP IDISFLVGKL VFVWMIMLLF PVILSNLVYE KEHKLRTIMK MHGLGDMAYW
401: IISYCYFLLL SLLYMLFLVF FGSLFGIKLF ILSDYRVQFV IYFTYINLQI SFAFLMATYF SKVGTASVTG YLFTIGSAYL GEYLFRPIFE DMSMSRSWTT
501: LMEFFPPFSF YCIIYEFSPP PSPLYRTDFS GIHWEDLSDH KNGMTDILII MAVEWATFLL LTFFLDEFCT LRNRIRKIAS ACHSSTDWSS HTCQMQTIQL
601: QEFVSSAEAD RTDALREREI VEQLLQESDS SYSVICDNLK KVYHGKDGNA EKTAVTGLSL SMQRGQCFGI LGPNGAGKTS LISMLTGFTK PTSGTAYIDG
701: MDIRLDMNKI YTGIGVCPQF DLLWETLTGR EHLMFYGRLK NLRGGALDMA VEHSLKSVRL FDDGIADKRV AKYSGGMKRR LSVAISLIGD PKVVYMDEPS
801: SGLDPASRRA LWNAVMSAKE NRAIILTTHS MEEAEALCDR IGIMVNGSLQ CIGNSKELKA KYGGTYVLTI TTAAGEEEAV EQLVRSLCPA ANRVYRISGT
901: QKFEMAKQGL RISEVFQAME HAKSWLNIAA WGLSDATLED TFIKVASESD VSSV
Best Arabidopsis Sequence Match ( AT3G47740.1 )
(BLAST)
001: MADSGPASFW TRANAILRKN LTYQKRNIWS NVRLIMIPFY LCIVLVFIQA LFDSQVNNSL DNQCGCQCID KLGDGKCQMT CGLEYSTRDQ GFFCAIPKPQ
101: PWPPLILIPR PEYRALDANF TNDSCRRKNS CPVTILFTGN NHSLGAVLSR NLLRRPFAMN SSDLLFSLAN NVLATTFKGS ATNYLDAGIV SDGSIYNIQP
201: RCPPNSNFSI SIGQSPLNFT KDMRCVQGLN LWRNNSIEVN LELFEGYHKG NSDGMINEIV AAYDLFDTNM TNFNVNIWFN ATYKDEARNQ PYKVVRVPRL
301: VNWVSNAYLQ YLQGPRTKML FEFVKEMPKP ETKLRLDIAS LIGPIFFTWV ILLLLPVILN SLVYEKQQRL RIIMKMHGLG DGPYWIISYA YFLALSTFYI
401: IFLMIFGSVI GLKFFLLNDF SLQFSFYFVY INLQISIAFL LSSAFSKVET ASVAAYLYVF GSGLLGMFLF QFLLEGLSFP RRWIFVMELY PGFSLYRGLY
501: EFSQNAYQGN LNGKDGMKWK YFSDNAIDEV FYIIIVEWFV ALIATYYIDK MSSSGKDLLF FLKNQNPFKI SHSLQKQVSA ISVEMEKLDV IHESEKVAQL
601: MLESSTSHAI VCDKLRKVYP GRDGNPPKKA VRVLSLAVPS GECFGMLGPN GAGKTSFINM MTGLVKPTSG AAFVQGLDIC KDMDRVYTSM GVCPQHDLLW
701: ETLTGREHLL FYGRLKNLKG VDLNQAVEES LRSVNLFHGG VADKPAGKYS GGMKRRLSVA ISLIGNPKVV YMDEPSTGLD PASRKNLWTV IKNAKRHTAI
801: ILTTHSMEEA EFLCDRLGIF VDGRLQCIGN PKELKGRYGG SYVLTMTTSS EHEKDVEMLV QEVSPNVKKI YHIAGTQKFE IPKDEVRISE VFQVVEKAKS
901: NFKVFAWGLA DTTLEDVFIK VARTAQAFNV FS
Arabidopsis Description
ABCA3ABC transporter A family member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEH6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.