CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG29778	Sorghum	plasma membrane	66.01	49.27
Zm00001d053603_P005	Maize	plasma membrane	82.02	45.98
EES04733	Sorghum	plasma membrane	57.87	43.23
KXG25097	Sorghum	plasma membrane	53.51	39.77
OQU89360	Sorghum	plasma membrane	50.84	38.19
OQU80391	Sorghum	mitochondrion	48.03	36.5
EER89983	Sorghum	plastid	47.75	35.64
OQU80389	Sorghum	mitochondrion, plasma membrane	45.79	30.47
KXG28389	Sorghum	plastid	9.97	26.1
EER90300	Sorghum	cytosol, endoplasmic reticulum, mitochondrion	8.85	23.51
EES14950	Sorghum	mitochondrion, plasma membrane, plastid	28.51	21.12
EER96343	Sorghum	plastid	9.41	18.98

Protein Annotations

MapMan:24.1.3.2.1	Gene3D:3.40.50.300	UniProt:A0A1Z5RLJ6	InterPro:AAA+_ATPase	InterPro:ABCA	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	EnsemblPlants:OQU84622
ProteinID:OQU84622	ProteinID:OQU84622.1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF12698	ScanProsite:PS00211
PFscan:PS50893	PANTHER:PTHR19229	PANTHER:PTHR19229:SF127	SMART:SM00382	EnsemblPlantsGene:SORBI_3004G089300	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI000B8B98F7	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:7572387..7579566

Molecular Weight (calculated)

79889.2 Da

IEP (calculated)

8.316

GRAVY (calculated)

0.060

Length

712 amino acids

Sequence
(BLAST)

001: MDNKEARCSQ ALFEWRENSI VINNELYKGF RESKATERIE NTNDIVSAYD LTSSDLKHYN MIVQYNSEKS NMLRVARLMN LASNAYLQLR GNGTKMRFGF
101: VKDMPRDGHP LKAPDMSFIV GKLVFIQIIM LLFPVILSSL VYEKQQKLRA MMKMHGLGDM AYWTISYCYF LLISLLYIFL LVTFGATVGI KLFAVNSYML
201: QFLVYFIYMN LQISFAFFTT TYFSTTTIAN VAGHLYVTGS GFIGEYLFRP FVEDTSVPRS LITLMEFFPP ISLYRIIYEL SPPPSEGFFS DFSGVHLGDL
301: SNPKNGILVL LIIMVLEWPI FIFLTLYLDE FGCLRNGIRK LLTASRPDGS YQTLQKPSTQ PQEFEASIEI DRTDILRERE IVDRFLKQPD TSYSVIIDNI
401: RKVYPPKDGN AEVVAVKGFS LSIQRGQCFG LLGSNGAGKT SLISMLTGFT KPTSGTAYID GMDIRTDMSE IYTRIGVCPQ FNLLWETLTG REHLMFYGRL
501: KRLNGAALFE AAEQSLKALQ IFEGGVADTL VSQYSGGMKR RLSVAISLIG DPKVVYLDEP STGLDPASRS ALWNALKFAK KDKAIILTTH SMEEAEALCD
601: RIGIAAYGRL RCTGTSKELK AKYGGTLVFT VTVAAAAGED EDEAVERLVR SISPAAKRTY HIAGTQKFEL PKQGVKIAEV FRAMEQAKRS LNIAAWGLVD
701: TTLEDVFIKV AC

Best Arabidopsis Sequence Match ( AT3G47760.3 )
(BLAST)

001: MGNHVPAGFF TQANSLFRKN LTYQKRNIWS NVRLIVIPFY LCVLLVGIQV LFDTQVNNSA DNRCGCRCID KNGDGKCGQK SCGLQYSSQN QAFFCAFPNP
101: PPLLPLLHIP RPETRSSDRD RDSCRQTGSC PVTILLTGNN HSLGTTISRN LLSTSFAMNS SDLFLRNLAY NVLGTTSKAD YTNYLDPGIL SDLPIFNVQP
201: RCTPDTTTFS FPFRQSPLEF HKEVRCVEGL NLWRNNSIEI SNEIFKGYRQ GNLEEIINEV AAAYDLMDTD INNFNVTIWY NSTYKGDLRD RRVKYVRVPR
301: SVNLVSNAYL EFLQGSGTKM LFDFVKEMPK QETRLRLEMA SLIGPIFFTW VILLLFPVML TSLVYEKQQH LRIIMKMHGL GDGPYWMITY AYFLAISIVY
401: IICLMIFGSA IGLKFFRFND YSIQFIFYFL CINLQISIAF LVSSAFSKIE TASVAAYLYV FGSGLLGAFL FQFLLEGLSF PRSWIYIMEL YPGFSLYRGL
501: YEFSQYAFKR NLNGSGGMKW KDFNDSAMEE IFYIIIVEWF VALIAAYYTD KISSSGIDPF FFLKNQNPFK KSPSPYGLQR QVSAIAIEME KLDVAHERVK
601: VEQLMLETST GHAIVCDNLK KVYPCRDGNP QKMAVRGLSL AVPSGECFGM LGPNGAGKTS FINMMTGLMK PTSGAAFVHG LDICKDMDIV YTSIGVCPQH
701: DLLWETLTGR EHLLFYGRLK NLKGSDLDQA VEESLKSVNL FRGGVADKPA GKYSGGMKRR LSVAISLIGS PKVVYMDEPS TGLDPASRRS LWTAIKRAKN
801: HTAIILTTHS MEEAEFLCDR LGIFVDGRLQ CVGNPKELKA RYGGSYVLTM TTPSEHEKDV EMLVQDVSPN AKKIYHIAGT QKFEIPKEEV RISEVFQAVE
901: KAKDNFRVFA WGLADTTLED VFIKVARTAQ ASNVFS

Arabidopsis Description

ABCA5ABC transporter A family member 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.