Factsheet for AT3G47780.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 2
endoplasmic reticulum 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	endoplasmic reticulum, mitochondrion, plasma membrane, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018113.1-P	Field mustard	plasma membrane	85.56	84.93
CDY36930	Canola	plasma membrane	85.24	84.61
CDY24156	Canola	plasma membrane	84.92	84.29
CDX83025	Canola	plasma membrane	84.71	84.08
Bra033785.1-P	Field mustard	plasma membrane	84.6	83.97
CDX68441	Canola	plasma membrane	83.21	82.59
AT3G47740.1	Thale cress	plasma membrane	76.58	76.82
AT3G47750.1	Thale cress	mitochondrion, plasma membrane	76.58	76.41
AT3G47760.3	Thale cress	plasma membrane	76.36	76.28
AT3G47770.2	Thale cress	endoplasmic reticulum, golgi, plasma membrane, plastid	73.26	73.97
AT5G61740.1	Thale cress	plasma membrane	68.88	70.85
AT5G61700.1	Thale cress	plasma membrane	69.3	70.67
KRH54520	Soybean	plasma membrane, plastid	59.36	68.77
AT3G47790.1	Thale cress	plasma membrane	64.92	67.37
Solyc03g113040.2.1	Tomato	plastid	67.17	66.45
KRG88422	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	34.33	65.38
KRH63384	Soybean	plasma membrane	50.8	65.25
Solyc03g113060.2.1	Tomato	extracellular	65.35	64.72
Solyc06g070920.2.1	Tomato	extracellular, plasma membrane	42.67	62.54
KRH56933	Soybean	plasma membrane, plastid	63.1	62.17
KRH03450	Soybean	plasma membrane, plastid	62.67	61.43
TraesCS7A01G367700.1	Wheat	plasma membrane	36.26	59.68
KXG25097	Sorghum	plasma membrane	60.21	58.77
Os08t0398300-01	Rice	plasma membrane	59.89	58.52
TraesCS1D01G345200.1	Wheat	plasma membrane	59.25	58.19
TraesCS1B01G356200.1	Wheat	plasma membrane	59.14	58.09
TraesCS1A01G343000.1	Wheat	plasma membrane	59.14	58.03
HORVU1Hr1G075620.5	Barley	plasma membrane	58.72	57.55
HORVU4Hr1G087670.8	Barley	mitochondrion	58.72	57.19
Zm00001d050259_P002	Maize	plasma membrane	60.11	57.11
OQU89360	Sorghum	plasma membrane	57.11	56.33
TraesCS5A01G193200.1	Wheat	plasma membrane	56.79	56.13
TraesCS5D01G195700.1	Wheat	plasma membrane	56.58	55.92
TraesCS4B01G365000.1	Wheat	plasma membrane	58.82	55.89
Zm00001d020208_P003	Maize	plasma membrane	56.47	55.7
TraesCSU01G138200.1	Wheat	plasma membrane	58.93	55.21
VIT_07s0095g00600.t01	Wine grape	extracellular	4.06	55.07
Solyc06g070950.1.1	Tomato	plasma membrane	52.41	54.99
TraesCS5A01G534100.3	Wheat	cytosol	59.04	54.65
TraesCS3D01G368700.2	Wheat	plasma membrane	56.15	54.24
TraesCS5B01G188600.1	Wheat	plasma membrane	55.08	54.21
HORVU5Hr1G056930.20	Barley	plasma membrane	56.36	53.94
Os06t0589300-01	Rice	plasma membrane	54.22	53.42
TraesCS7D01G355100.1	Wheat	plastid	53.9	52.77
EER89983	Sorghum	plastid	53.58	52.52
TraesCS7B01G260800.1	Wheat	plastid	53.48	52.3
Zm00001d036927_P001	Maize	plasma membrane, plastid	53.8	52.12
HORVU7Hr1G085680.2	Barley	endoplasmic reticulum, peroxisome, plastid	54.01	50.96
GSMUA_Achr7P23890_001	Banana	plasma membrane	62.57	50.0
GSMUA_Achr3P20510_001	Banana	plasma membrane	61.07	48.68
HORVU6Hr1G043820.1	Barley	cytosol, endoplasmic reticulum, plasma membrane	7.38	41.07
HORVU3Hr1G030470.1	Barley	cytosol, extracellular, plasma membrane	7.38	41.07
HORVU4Hr1G039510.1	Barley	cytosol	7.17	39.88
Solyc06g070930.2.1	Tomato	plastid	11.55	39.42
AT3G47730.1	Thale cress	mitochondrion, plasma membrane	25.45	24.21
AT1G67940.1	Thale cress	cytosol	6.74	23.95
AT5G61730.2	Thale cress	plasma membrane, plastid	24.28	23.89
AT5G61690.2	Thale cress	plasma membrane	24.06	23.61
AT5G14100.1	Thale cress	plastid	6.95	23.38
AT1G65410.1	Thale cress	plastid	8.13	22.03
AT2G41700.1	Thale cress	mitochondrion, plasma membrane	21.18	10.52

Protein Annotations

MapMan:24.1.3.2.1	Gene3D:3.40.50.300	EntrezGene:823932	InterPro:AAA+_ATPase	InterPro:ABCA	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	ProteinID:AEE78328.1	ArrayExpress:AT3G47780	EnsemblPlantsGene:AT3G47780	RefSeq:AT3G47780	TAIR:AT3G47780
RefSeq:AT3G47780-TAIR-G	EnsemblPlants:AT3G47780.1	TAIR:AT3G47780.1	Symbol:ATATH6	ProteinID:CAB41861.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150
GO:GO:0009506	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626
GO:GO:0043231	GO:GO:0055085	InterPro:IPR003439	RefSeq:NP_190362.2	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF12698	PO:PO:0000084	PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0009005
PO:PO:0009025	PO:PO:0009029	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0020030	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	ScanProsite:PS00211	PFscan:PS50893
PANTHER:PTHR19229	PANTHER:PTHR19229:SF141	UniProt:Q9STT5	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix
UniParc:UPI00001636D6	SEG:seg	:	:	:	:

Description

ABCA7ABC transporter A family member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT5]

Coordinates

chr3:+:17624340..17629285

Molecular Weight (calculated)

105053.0 Da

IEP (calculated)

9.080

GRAVY (calculated)

-0.059

Length

935 amino acids

Sequence
(BLAST)

001: MADPGPASFS TRANALLRKN LTYQKRNLWS NIRLIMIPFY LCILLVIIQI LFDTQVNNSA DNRCGCECIE RNRAGKCQRE LCGLEHSKPD QAFFCSIPRP
101: PLWPPLLQIP RPESRDVRGL RDDSCRRTGS CPVTILFTGN NRSLGTTVSE NLFTSSVSAN ASEILRTLAN NVLGTTVEAD FTNYLDPGIA SNLSIYNIQP
201: RCILNATFPF SFEQPPLKFE KELRCVQGSN LWTNTSKEVN DKIFKGYKKG NPEGKINEIA AAYDLLNTDR NNFNVHIWYN STYKDDAGNR LIKLIRVPRS
301: VNLVSNAYLQ FLQGPGTRML FEYVKEMPKP ETSLRLDIAS LIGPLFFTWV ILLLFPVILS SLVYEKQQHL RIIMKMHGLG DGPYWMISYA YFLTISVLYV
401: ICLMIFGSAI GLKFFRLNSY SIQFVFYFLY LNLQIALAFL VSSVFSKVKT STVASYIYVF GSGLLGLFLL NFLIEDSSFP RGWIIVMELY PGFSLYRGLY
501: ELAQFAFRGN LRGEDGMKWK DFGDSAMDDV FYIIVVEWFL ALIAAYYIDK ISSSGRNPLF FLQNPFKKSP SLRRPSLQRQ GSKVSVDMEK PDVTHESKKV
601: ERLMLESSTS HAIVCDNLKK VYPGRDGNPP KLAVRGLSLA VPSGECFGML GPNGAGKTSF INMMTGLLKP TSGTALVQGL DICNDMDRVY TSMGVCPQHD
701: LLWETLTGRE HLLFYGRLKN LKGADLNQAV EESLKSVNLF HGGVADKPAG KYSGGMKRRL SVAISLIGNP KVVYMDEPST GLDPASRKNL WTVIKRAKQN
801: TAIILTTHSM EEAEFLCDRL GIFVDGGLQC IGNPKELKGR YGGSYVFTMT TSSEHEQNVE KLIKDVSPNA KKIYHIAGTQ KFELPKEEVR ISEVFQAVEK
901: AKSNFTVFAW GLADTTLEDV FIKVVRNGQA FNVFS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.