Factsheet for HORVU4Hr1G039510.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G043820.1	Barley	cytosol, endoplasmic reticulum, plasma membrane	96.43	96.43
HORVU3Hr1G030470.1	Barley	cytosol, extracellular, plasma membrane	83.33	83.33
TraesCS7A01G367700.1	Wheat	plasma membrane	77.38	22.89
VIT_12s0055g00730.t01	Wine grape	extracellular	15.48	20.47
CDY23798	Canola	nucleus, peroxisome, plasma membrane	34.52	15.1
CDX68438	Canola	endoplasmic reticulum, extracellular, plasma membrane	37.5	14.79
KRG88422	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	42.26	14.46
TraesCS7D01G355100.1	Wheat	plastid	76.19	13.4
TraesCS7B01G260800.1	Wheat	plastid	76.19	13.39
HORVU7Hr1G085680.2	Barley	endoplasmic reticulum, peroxisome, plastid	77.38	13.12
CDY23043	Canola	cytosol, mitochondrion	36.31	11.91
EER89983	Sorghum	plastid	67.26	11.84
Solyc06g070920.2.1	Tomato	extracellular, plasma membrane	43.45	11.44
Zm00001d036927_P001	Maize	plasma membrane, plastid	64.29	11.19
Os06t0589300-01	Rice	plasma membrane	63.1	11.17
Bra033786.1-P	Field mustard	cytosol, mitochondrion, nucleus	18.45	10.4
Bra018114.1-P	Field mustard	cytosol, peroxisome, plasma membrane	34.52	9.22
KRH54520	Soybean	plasma membrane, plastid	42.26	8.8
Bra012927.1-P	Field mustard	cytosol	32.14	8.78
VIT_18s0041g02240.t01	Wine grape	plasma membrane	37.5	8.56
PGSC0003DMT400083071	Potato	plasma membrane	43.45	7.81
CDX77874	Canola	plasma membrane	37.5	7.6
CDY31786	Canola	cytosol, nucleus, plasma membrane	29.76	7.58
Solyc03g113060.2.1	Tomato	extracellular	42.26	7.52
CDY36932	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	39.29	7.45
CDY02120	Canola	cytosol, nucleus, plasma membrane	29.17	7.44
Bra015049.1-P	Field mustard	plasma membrane	39.29	7.39
CDX77421	Canola	plasma membrane	41.07	7.38
KRH56933	Soybean	plasma membrane, plastid	41.67	7.38
VIT_17s0000g05860.t01	Wine grape	plasma membrane, plastid	41.67	7.38
AT3G47770.2	Thale cress	endoplasmic reticulum, golgi, plasma membrane, plastid	40.48	7.34
CDX68441	Canola	plasma membrane	41.07	7.32
CDY39546	Canola	plasma membrane	40.48	7.27
Bra033785.1-P	Field mustard	plasma membrane	40.48	7.22
CDY36930	Canola	plasma membrane	40.48	7.22
CDX83025	Canola	plasma membrane	40.48	7.22
Bra018113.1-P	Field mustard	plasma membrane	40.48	7.22
Solyc03g113040.2.1	Tomato	plastid	40.48	7.2
AT3G47780.1	Thale cress	plasma membrane	39.88	7.17
HORVU1Hr1G075620.5	Barley	plasma membrane	40.48	7.13
Bra018115.1-P	Field mustard	plasma membrane	39.29	7.13
AT3G47740.1	Thale cress	plasma membrane	39.29	7.08
CDY24156	Canola	plasma membrane	39.29	7.01
HORVU4Hr1G087670.8	Barley	mitochondrion	39.88	6.98
Bra019513.1-P	Field mustard	plasma membrane	36.9	6.94
HORVU6Hr1G038520.24	Barley	endoplasmic reticulum, plasma membrane	38.69	6.92
KRH03450	Soybean	plasma membrane, plastid	39.29	6.92
CDY24158	Canola	plasma membrane	38.1	6.91
AT3G47790.1	Thale cress	plasma membrane	36.9	6.88
CDY21797	Canola	plasma membrane	36.9	6.86
AT3G47750.1	Thale cress	mitochondrion, plasma membrane	38.1	6.83
Solyc06g070950.1.1	Tomato	plasma membrane	35.71	6.73
AT3G47760.3	Thale cress	plasma membrane	37.5	6.73
HORVU5Hr1G056930.20	Barley	plasma membrane	38.69	6.65
CDY02114	Canola	plasma membrane	35.12	6.65
AT5G61700.1	Thale cress	plasma membrane	35.71	6.54
HORVU1Hr1G075610.7	Barley	extracellular, mitochondrion, plasma membrane	35.71	6.5
CDY36931	Canola	plastid	35.71	6.44
CDY23039	Canola	plasma membrane	33.93	6.42
AT5G61740.1	Thale cress	plasma membrane	34.52	6.38
CDY24157	Canola	plastid	35.12	6.2
CDY62599	Canola	plasma membrane	30.36	5.87
HORVU3Hr1G089880.8	Barley	plastid	8.33	5.15
HORVU5Hr1G091750.1	Barley	plastid	10.12	4.39
HORVU7Hr1G098490.2	Barley	plastid	7.14	4.11
Bra012931.1-P	Field mustard	cytosol, peroxisome, plasma membrane	13.69	3.89
HORVU4Hr1G079940.5	Barley	cytosol	7.14	3.85
HORVU4Hr1G025760.12	Barley	cytosol	3.57	3.49
HORVU1Hr1G075640.9	Barley	golgi	19.64	3.37
CDX68439	Canola	nucleus	2.98	3.16
CDX68440	Canola	cytosol, mitochondrion	0.6	0.72
KRH63384	Soybean	plasma membrane	1.19	0.27
PGSC0003DMT400083070	Potato	cytosol	0.0	0.0
Solyc06g070930.2.1	Tomato	plastid	0.0	0.0
CDX94927	Canola	cytosol	0.0	0.0
VIT_07s0095g00600.t01	Wine grape	extracellular	0.0	0.0

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A287NV09	InterPro:ABCA	InterPro:ABC_transporter-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
GO:GO:0042626	GO:GO:0055085	EnsemblPlantsGene:HORVU4Hr1G039510	EnsemblPlants:HORVU4Hr1G039510.1	InterPro:IPR003439	InterPro:P-loop_NTPase
PFAM:PF00005	PANTHER:PTHR19229	PANTHER:PTHR19229:SF141	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000B46261B
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:-:302675340..302678058

Molecular Weight (calculated)

18646.7 Da

IEP (calculated)

9.203

GRAVY (calculated)

-0.105

Length

168 amino acids

Sequence
(BLAST)

001: MRWSDLNDRT NGMRDVMIII IVEWLXXXXX XYYFDYAASA RNNSGLLSII KRLLRKNPTW RRITVNKVAD NDVHVEMGKL DIIKEVSYYI TVHHSYIQFK
101: FSPDICDYVV VYDDLKKLYH GKDGNPDKYV VRALSLTLPY GECLGILGPN GAGKISFISM MIGFSKPT

Best Arabidopsis Sequence Match ( AT3G47770.3 )
(BLAST)

001: MAKPVAASFL TQANALFKKN LTYQKRNIWS NVRLIVIPLY LCVVLVCIQA VFDSLVNNSV DNQCGCRCAD DDKNGDGKCE IKSCGLQYSS QNQAVFCAFP
101: NPPPLLPLLH IPPSVNRDSC QRTGSCPVTI LVTGNNQSLG TTLSENLLST SFTVNSSSDL FLRNLAYNVL STTSETDYTN YRDPGIYSDL PIFNIQPQCT
201: PATILSLSFR QPPLEFHKEV RCVQGLNLWR NNSLEVNDEI FKGFRKENHE EIINEVAAAY DLLNTDRNKF NVTIWYYTTY KGDLQDWRVK YVRVPRSVNM
301: VSNAYLQFLR GPGTKILFDF VKEMPKQETR LRMDMASLIG PIFFTWVILL LFPVILTSLV YEKQQRLRII MKMHGLGDAP YWMISYAYFL AISTLYIVCL
401: MIFGSAIGLK FFRFNDYTIQ FMFYFLYINL QISIAFLVSS AFSKAVTASV VAYIYVFGSG LLGAFLFQFL IESLSFPRRW IFVMELYPGF SLYRGLYEFS
501: QYAFQRNLNG RDGMKWKDFR GSAMDEVFTI IIVEWVVALV ATYYIDRVSS SSKDTFAFLK NPFKLSPTPQ MLSFQKERSD VSVEMEKLDV IQEKETVKQL
601: IFERSKNHGI VCDNLKKVYQ GRDGNPPKLA VCGLSLAVPS GECFGMLGPN GAGKTSFINM MTGLVKPSSG SAFVQGLDIC KDMDKVYISM GVCPQHE

Arabidopsis Description

ABCA6ABC transporter A family member 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.