Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 3
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G211300.1 | Wheat | cytosol, peroxisome, plasma membrane | 79.34 | 93.83 |
| TraesCS6A01G183200.1 | Wheat | plasma membrane | 90.95 | 91.73 |
| TraesCS6D01G170100.1 | Wheat | plastid | 90.84 | 91.23 |
| Os02t0107900-00 | Rice | cytosol | 19.6 | 76.35 |
| EES04733 | Sorghum | plasma membrane | 66.99 | 66.0 |
| Zm00001d016396_P001 | Maize | plasma membrane | 50.8 | 62.43 |
| HORVU1Hr1G075620.5 | Barley | plasma membrane | 50.27 | 49.48 |
| HORVU4Hr1G087670.8 | Barley | mitochondrion | 49.95 | 48.85 |
| HORVU5Hr1G056930.20 | Barley | plasma membrane | 48.24 | 46.37 |
| HORVU1Hr1G075610.7 | Barley | extracellular, mitochondrion, plasma membrane | 44.62 | 45.4 |
| HORVU7Hr1G085680.2 | Barley | endoplasmic reticulum, peroxisome, plastid | 45.05 | 42.68 |
| HORVU6Hr1G043820.1 | Barley | cytosol, endoplasmic reticulum, plasma membrane | 7.03 | 39.29 |
| HORVU4Hr1G039510.1 | Barley | cytosol | 6.92 | 38.69 |
| HORVU3Hr1G030470.1 | Barley | cytosol, extracellular, plasma membrane | 6.71 | 37.5 |
| HORVU3Hr1G089880.8 | Barley | plastid | 7.77 | 26.84 |
| HORVU1Hr1G075640.9 | Barley | golgi | 23.75 | 22.78 |
| HORVU7Hr1G098490.2 | Barley | plastid | 6.5 | 20.89 |
| HORVU4Hr1G079940.5 | Barley | cytosol | 6.6 | 19.87 |
| HORVU4Hr1G025760.12 | Barley | cytosol | 3.51 | 19.19 |
| HORVU5Hr1G091750.1 | Barley | plastid | 7.35 | 17.83 |
Protein Annotations
| MapMan:24.1.3.2.1 | Gene3D:3.40.50.300 | UniProt:A0A287TZ07 | InterPro:AAA+_ATPase | InterPro:ABCA | InterPro:ABC_transporter-like |
| InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | EnsemblPlantsGene:HORVU6Hr1G038520 | EnsemblPlants:HORVU6Hr1G038520.24 |
| InterPro:IPR003439 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF12698 | ScanProsite:PS00211 | PFscan:PS50893 |
| PANTHER:PTHR19229 | PANTHER:PTHR19229:SF127 | SMART:SM00382 | SUPFAM:SSF52540 | SignalP:SignalP-TM | TMHMM:TMhelix |
| UniParc:UPI000B47651D | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:+:197023194..197028990
Molecular Weight (calculated)
104344.0 Da
IEP (calculated)
7.473
GRAVY (calculated)
0.075
Length
939 amino acids
Sequence
(BLAST)
(BLAST)
001: GQASVFILLV LCFLWDIFSP LITQSNRQRR ACKTNCCLIL FPLILCAGVG GLQIAINRAV KGDTTPLDCS CSDAVVPENT TGGAACSEDC PQPRAPKWPP
101: VVQIPPSSTS RFGGGPPGAS CGAQGSCAAT FLVTGANQSF VGSAMDDMIP VHDASVNVSA DDMTALADFV LAGYFWYSGS PLPDSFLQNK CTPNLTLSYS
201: FVNGNETETQ DVDCTDGLML WRDSSWLVRD DLYSGYTNRS NEIAAAYDFL SSDQGNFNLI ISYNSTYEYG AYYGFPIPFV QFSRWNTPRL LGVPRLTNMA
301: SNAYLRLIGN GLKISFDFVK EMPRAGRSLG MFDLTSTIGP LPYVLTIQLL FPVILTNIVY EKQKKLRIMM KMHGLGDLPY WTISYCYFIL LSMLYLLSFM
401: VFGTVFGFTF FRLNSYGVQF VFYFAYMSLQ ISFAFLMATC FSNVRTAAVT GYFYVFGSGL IADFFFKPYI EDIFISRSWI ILLELFPPFS LYRIVYEFSQ
501: SAFLVSQIDR TGMQWSDLND PKNGMASVLT IMVLEWILFL LLSFYLDHFG SFQSGIRKAV LLLHSRRAGN RSQSVEQQTT QIQEFKASVE MERTDVIKER
601: EMVGQLLQEP NSNYSVICDN LKKVYPGKDG NSKKIAVREL SLSMARGQCF GVLGPNGAGK TTLINMLTGF TKPTSGTAYI EGMDIRLHMD TIYTGIGVCP
701: QHDLLWENLT GREHLMFYGR LKKLKGAKLA QAIEQSLRSV RLFDGGVPDK LVQKYSGGMK RRLSVAISLI GDPKVVYMDE PSSGLDPASR KDLWKAVKSA
801: KQDRAIILTT HSMEEAEVLC DRIGIIADGT LQCIGNSREL KTKYGGSYVL TITTVASEEA EEEVAKLVRS ISPAVSRVYR ISGTQKFEMP KQEVRISAVF
901: HAMESAKSRM TILAWGLADT TLEDVFIRVA KESEASSVT
101: VVQIPPSSTS RFGGGPPGAS CGAQGSCAAT FLVTGANQSF VGSAMDDMIP VHDASVNVSA DDMTALADFV LAGYFWYSGS PLPDSFLQNK CTPNLTLSYS
201: FVNGNETETQ DVDCTDGLML WRDSSWLVRD DLYSGYTNRS NEIAAAYDFL SSDQGNFNLI ISYNSTYEYG AYYGFPIPFV QFSRWNTPRL LGVPRLTNMA
301: SNAYLRLIGN GLKISFDFVK EMPRAGRSLG MFDLTSTIGP LPYVLTIQLL FPVILTNIVY EKQKKLRIMM KMHGLGDLPY WTISYCYFIL LSMLYLLSFM
401: VFGTVFGFTF FRLNSYGVQF VFYFAYMSLQ ISFAFLMATC FSNVRTAAVT GYFYVFGSGL IADFFFKPYI EDIFISRSWI ILLELFPPFS LYRIVYEFSQ
501: SAFLVSQIDR TGMQWSDLND PKNGMASVLT IMVLEWILFL LLSFYLDHFG SFQSGIRKAV LLLHSRRAGN RSQSVEQQTT QIQEFKASVE MERTDVIKER
601: EMVGQLLQEP NSNYSVICDN LKKVYPGKDG NSKKIAVREL SLSMARGQCF GVLGPNGAGK TTLINMLTGF TKPTSGTAYI EGMDIRLHMD TIYTGIGVCP
701: QHDLLWENLT GREHLMFYGR LKKLKGAKLA QAIEQSLRSV RLFDGGVPDK LVQKYSGGMK RRLSVAISLI GDPKVVYMDE PSSGLDPASR KDLWKAVKSA
801: KQDRAIILTT HSMEEAEVLC DRIGIIADGT LQCIGNSREL KTKYGGSYVL TITTVASEEA EEEVAKLVRS ISPAVSRVYR ISGTQKFEMP KQEVRISAVF
901: HAMESAKSRM TILAWGLADT TLEDVFIRVA KESEASSVT
001: MADSGPASFW TRANAILRKN LTYQKRNIWS NVRLIMIPFY LCIVLVFIQA LFDSQVNNSL DNQCGCQCID KLGDGKCQMT CGLEYSTRDQ GFFCAIPKPQ
101: PWPPLILIPR PEYRALDANF TNDSCRRKNS CPVTILFTGN NHSLGAVLSR NLLRRPFAMN SSDLLFSLAN NVLATTFKGS ATNYLDAGIV SDGSIYNIQP
201: RCPPNSNFSI SIGQSPLNFT KDMRCVQGLN LWRNNSIEVN LELFEGYHKG NSDGMINEIV AAYDLFDTNM TNFNVNIWFN ATYKDEARNQ PYKVVRVPRL
301: VNWVSNAYLQ YLQGPRTKML FEFVKEMPKP ETKLRLDIAS LIGPIFFTWV ILLLLPVILN SLVYEKQQRL RIIMKMHGLG DGPYWIISYA YFLALSTFYI
401: IFLMIFGSVI GLKFFLLNDF SLQFSFYFVY INLQISIAFL LSSAFSKVET ASVAAYLYVF GSGLLGMFLF QFLLEGLSFP RRWIFVMELY PGFSLYRGLY
501: EFSQNAYQGN LNGKDGMKWK YFSDNAIDEV FYIIIVEWFV ALIATYYIDK MSSSGKDLLF FLKNQNPFKI SHSLQKQVSA ISVEMEKLDV IHESEKVAQL
601: MLESSTSHAI VCDKLRKVYP GRDGNPPKKA VRVLSLAVPS GECFGMLGPN GAGKTSFINM MTGLVKPTSG AAFVQGLDIC KDMDRVYTSM GVCPQHDLLW
701: ETLTGREHLL FYGRLKNLKG VDLNQAVEES LRSVNLFHGG VADKPAGKYS GGMKRRLSVA ISLIGNPKVV YMDEPSTGLD PASRKNLWTV IKNAKRHTAI
801: ILTTHSMEEA EFLCDRLGIF VDGRLQCIGN PKELKGRYGG SYVLTMTTSS EHEKDVEMLV QEVSPNVKKI YHIAGTQKFE IPKDEVRISE VFQVVEKAKS
901: NFKVFAWGLA DTTLEDVFIK VARTAQAFNV FS
101: PWPPLILIPR PEYRALDANF TNDSCRRKNS CPVTILFTGN NHSLGAVLSR NLLRRPFAMN SSDLLFSLAN NVLATTFKGS ATNYLDAGIV SDGSIYNIQP
201: RCPPNSNFSI SIGQSPLNFT KDMRCVQGLN LWRNNSIEVN LELFEGYHKG NSDGMINEIV AAYDLFDTNM TNFNVNIWFN ATYKDEARNQ PYKVVRVPRL
301: VNWVSNAYLQ YLQGPRTKML FEFVKEMPKP ETKLRLDIAS LIGPIFFTWV ILLLLPVILN SLVYEKQQRL RIIMKMHGLG DGPYWIISYA YFLALSTFYI
401: IFLMIFGSVI GLKFFLLNDF SLQFSFYFVY INLQISIAFL LSSAFSKVET ASVAAYLYVF GSGLLGMFLF QFLLEGLSFP RRWIFVMELY PGFSLYRGLY
501: EFSQNAYQGN LNGKDGMKWK YFSDNAIDEV FYIIIVEWFV ALIATYYIDK MSSSGKDLLF FLKNQNPFKI SHSLQKQVSA ISVEMEKLDV IHESEKVAQL
601: MLESSTSHAI VCDKLRKVYP GRDGNPPKKA VRVLSLAVPS GECFGMLGPN GAGKTSFINM MTGLVKPTSG AAFVQGLDIC KDMDRVYTSM GVCPQHDLLW
701: ETLTGREHLL FYGRLKNLKG VDLNQAVEES LRSVNLFHGG VADKPAGKYS GGMKRRLSVA ISLIGNPKVV YMDEPSTGLD PASRKNLWTV IKNAKRHTAI
801: ILTTHSMEEA EFLCDRLGIF VDGRLQCIGN PKELKGRYGG SYVLTMTTSS EHEKDVEMLV QEVSPNVKKI YHIAGTQKFE IPKDEVRISE VFQVVEKAKS
901: NFKVFAWGLA DTTLEDVFIK VARTAQAFNV FS
Arabidopsis Description
ABCA3ABC transporter A family member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEH6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.