Factsheet for HORVU3Hr1G089880.8

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G399500.1	Wheat	plastid	89.34	91.01
TraesCS3B01G432400.1	Wheat	plastid	88.97	88.32
TraesCS3D01G393600.2	Wheat	plastid	88.6	87.32
KXG28389	Sorghum	plastid	79.78	79.78
Os11t0490800-02	Rice	plastid	78.68	74.05
Zm00001d007328_P003	Maize	plastid	73.53	66.01
CDX69605	Canola	plastid	63.97	63.5
Bra008779.1-P	Field mustard	plastid	63.6	63.14
Solyc02g068180.2.1	Tomato	plastid	63.6	63.14
VIT_14s0068g01730.t01	Wine grape	plastid	65.81	63.03
CDY58413	Canola	cytosol, plastid	62.87	62.41
KRG94568	Soybean	mitochondrion	58.46	60.92
AT5G14100.1	Thale cress	plastid	61.76	60.43
GSMUA_Achr1P13520_001	Banana	plastid	68.38	59.42
TraesCS3A01G399400.1	Wheat	cytosol	44.49	47.83
HORVU7Hr1G098490.2	Barley	plastid	25.74	23.97
HORVU4Hr1G079940.5	Barley	cytosol	27.21	23.72
HORVU5Hr1G091750.1	Barley	plastid	25.0	17.57
HORVU4Hr1G025760.12	Barley	cytosol	8.82	13.95
HORVU6Hr1G043820.1	Barley	cytosol, endoplasmic reticulum, plasma membrane	5.15	8.33
HORVU4Hr1G039510.1	Barley	cytosol	5.15	8.33
HORVU6Hr1G038520.24	Barley	endoplasmic reticulum, plasma membrane	26.84	7.77
HORVU3Hr1G030470.1	Barley	cytosol, extracellular, plasma membrane	4.78	7.74
HORVU1Hr1G075610.7	Barley	extracellular, mitochondrion, plasma membrane	26.1	7.69
HORVU5Hr1G056930.20	Barley	plasma membrane	25.0	6.96
HORVU1Hr1G075620.5	Barley	plasma membrane	24.26	6.92
HORVU4Hr1G087670.8	Barley	mitochondrion	24.26	6.88
HORVU1Hr1G075640.9	Barley	golgi	23.53	6.54
HORVU7Hr1G085680.2	Barley	endoplasmic reticulum, peroxisome, plastid	23.16	6.36

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	GO:GO:0009941	GO:GO:0016020	GO:GO:0016787
GO:GO:0016887	EnsemblPlantsGene:HORVU3Hr1G089880	EnsemblPlants:HORVU3Hr1G089880.8	InterPro:IPR003439	UniProt:M0X8C2	InterPro:P-loop_NTPase
PFAM:PF00005	PFscan:PS50893	PANTHER:PTHR43553	PANTHER:PTHR43553:SF12	SMART:SM00382	SUPFAM:SSF52540
UniParc:UPI00029585AA	SEG:seg	:	:	:	:

Description

Predicted protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:M0X8C2]

Coordinates

chrchr3H:+:630214664..630218410

Molecular Weight (calculated)

30601.2 Da

IEP (calculated)

9.542

GRAVY (calculated)

-0.122

Length

272 amino acids

Sequence
(BLAST)

001: MLFLSLNPVY SHIFSFSYPL RALMVSRRFS WRCRAERVSA GYSQLEVRKV SYRPPGTEQN LLNQTSLFLR EKSFGLIFGR SGSGKTTLLQ LLAGLSEPTS
101: GSICIQKYDD NGKPMGPSEV LASQRVGIVF QFPERYFLSD TILEEVTFGW PRQKADISLR EQLGLKLQNA INSVGLSAIS LDKDPQSLSG GFKRRLALAI
201: QLVQTPDLLL LDEPLAGLDW KARADVVNLL KDLKKDHTIL VVSHDLRELY PLVDRSWRME MGGVLKEESL PV

Best Arabidopsis Sequence Match ( AT5G14100.1 )
(BLAST)

001: MAVSTFSSPT PVFGIAEPPA SFSSTAIGWK QPLRFRRTKK PRVISCDYSC IEVRDVCYRP PGTQLNILNG VNFSLREKSF GLIFGKSGSG KTTLLQLLAG
101: LNKPTSGSIC IQGYGDDGQP KADPDLLPTE KVGIVFQFPE RFFVADNVLD EITFGWPRQK GSLQLKEQLT SNLQRAFNWV GLDSIPLDKD PQLLSGGYKR
201: RLALAIQLVQ TPDLLILDEP LAGLDWKARA DVAKLLKHLK KELTLLVVSH DLRELAALVD QSWRMETGGV LVAERPPL

Arabidopsis Description

ABCI11ABC transporter I family member 11, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LEF6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.