Factsheet for TraesCS3A01G399400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G399500.1	Wheat	plastid	49.01	46.44
TraesCS3B01G432400.1	Wheat	plastid	49.41	45.62
TraesCS3D01G393600.2	Wheat	plastid	49.01	44.93
HORVU3Hr1G089880.8	Barley	plastid	47.83	44.49
KXG28389	Sorghum	plastid	45.06	41.91
Os11t0490800-02	Rice	plastid	45.45	39.79
KRG94568	Soybean	mitochondrion	38.74	37.55
Bra008779.1-P	Field mustard	plastid	40.32	37.23
CDX69605	Canola	plastid	40.32	37.23
Zm00001d007328_P003	Maize	plastid	43.87	36.63
CDY58413	Canola	cytosol, plastid	39.53	36.5
AT5G14100.1	Thale cress	plastid	38.74	35.25
Solyc02g068180.2.1	Tomato	plastid	37.55	34.67
VIT_14s0068g01730.t01	Wine grape	plastid	38.74	34.51
GSMUA_Achr1P13520_001	Banana	plastid	40.32	32.59
TraesCS7A01G427700.1	Wheat	cytosol	18.58	18.08
TraesCS4A01G414400.1	Wheat	cytosol	17.0	16.35
TraesCS5A01G367900.1	Wheat	golgi	17.39	11.55
TraesCS7A01G367700.1	Wheat	plasma membrane	16.6	7.39
TraesCS6A01G183200.1	Wheat	plasma membrane	19.37	5.26
TraesCS5A01G193200.1	Wheat	plasma membrane	18.97	5.07
TraesCS1A01G343200.1	Wheat	mitochondrion	18.58	4.99
TraesCS1A01G343000.1	Wheat	plasma membrane	17.79	4.72
TraesCS5A01G534100.3	Wheat	cytosol	17.79	4.46
TraesCS1A01G342900.2	Wheat	plasma membrane	16.6	4.35

Protein Annotations

EnsemblPlants:TraesCS3A01G399400.1	EnsemblPlantsGene:TraesCS3A01G399400	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0016787	GO:GO:0016887	InterPro:ABC_transporter-like	InterPro:IPR003439
InterPro:P-loop_NTPase	PANTHER:PTHR43553	PANTHER:PTHR43553:SF12	PFAM:PF00005	SEG:seg	SUPFAM:SSF52540
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr3A:-:646502271..646505590

Molecular Weight (calculated)

26978.5 Da

IEP (calculated)

5.070

GRAVY (calculated)

0.130

Length

253 amino acids

Sequence
(BLAST)

001: MPNAPSISLV DAELVRADAL PIVAVGRRRS TPASPPCSIG GQDWYLSVPV RLKSAFSDSL SVDNTEVAAS IAGSFTRKLI EVFLEMSGRT GLSWVLPVGE
101: RQISCSVNVD KVGEHLSAGD SLISQLLAGL SEPTSGSICI QKYDDSGNPM GLSEVLAPQR VGIVGQSAIS LDKDPQSLSG GFKRRLALAI QLVQTPDLLL
201: LDEPLAGLDW KARADVMNLL RDLKKDHTIL VVSHDLSWNA DPFVVAVNRL IAS

Best Arabidopsis Sequence Match ( AT5G14100.1 )
(BLAST)

001: MAVSTFSSPT PVFGIAEPPA SFSSTAIGWK QPLRFRRTKK PRVISCDYSC IEVRDVCYRP PGTQLNILNG VNFSLREKSF GLIFGKSGSG KTTLLQLLAG
101: LNKPTSGSIC IQGYGDDGQP KADPDLLPTE KVGIVFQFPE RFFVADNVLD EITFGWPRQK GSLQLKEQLT SNLQRAFNWV GLDSIPLDKD PQLLSGGYKR
201: RLALAIQLVQ TPDLLILDEP LAGLDWKARA DVAKLLKHLK KELTLLVVSH DLRELAALVD QSWRMETGGV LVAERPPL

Arabidopsis Description

ABCI11ABC transporter I family member 11, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LEF6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.