Factsheet for TraesCS1A01G343000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
endoplasmic reticulum 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	endoplasmic reticulum, plasma membrane, plastid
ChloroP:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G345200.1	Wheat	plasma membrane	98.43	98.53
TraesCS1B01G356200.1	Wheat	plasma membrane	97.9	98.0
HORVU1Hr1G075620.5	Barley	plasma membrane	94.02	93.92
TraesCS5A01G534100.3	Wheat	cytosol	87.83	82.87
Os08t0398300-01	Rice	plasma membrane	81.85	81.5
KXG25097	Sorghum	plasma membrane	81.53	81.11
Zm00001d050259_P002	Maize	plasma membrane	81.64	79.06
TraesCS5A01G193200.1	Wheat	plasma membrane	72.4	72.94
CDX94927	Canola	cytosol	9.02	72.27
KRH54520	Soybean	plasma membrane, plastid	57.5	67.91
PGSC0003DMT400083070	Potato	cytosol	8.71	66.94
VIT_17s0000g05860.t01	Wine grape	plasma membrane, plastid	66.21	66.49
VIT_12s0055g00730.t01	Wine grape	extracellular	8.71	65.35
Solyc03g113040.2.1	Tomato	plastid	63.9	64.44
KRG88422	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	33.16	64.36
KRH63384	Soybean	plasma membrane	48.48	63.46
CDY02120	Canola	cytosol, nucleus, plasma membrane	43.65	63.13
Solyc06g070920.2.1	Tomato	extracellular, plasma membrane	41.76	62.38
TraesCS7A01G367700.1	Wheat	plasma membrane	37.15	62.32
CDY31786	Canola	cytosol, nucleus, plasma membrane	43.13	62.27
Solyc03g113060.2.1	Tomato	extracellular	61.39	61.97
Bra018114.1-P	Field mustard	cytosol, peroxisome, plasma membrane	40.19	60.89
AT3G47790.1	Thale cress	plasma membrane	56.45	59.71
Bra018113.1-P	Field mustard	plasma membrane	58.55	59.24
AT3G47780.1	Thale cress	plasma membrane	58.03	59.14
CDX83025	Canola	plasma membrane	58.45	59.13
KRH56933	Soybean	plasma membrane, plastid	58.87	59.11
Bra033785.1-P	Field mustard	plasma membrane	58.34	59.02
CDY24156	Canola	plasma membrane	58.24	58.92
CDY36930	Canola	plasma membrane	58.24	58.92
CDX68441	Canola	plasma membrane	57.92	58.6
Bra019513.1-P	Field mustard	plasma membrane	54.88	58.57
KRH03450	Soybean	plasma membrane, plastid	58.45	58.39
CDY36932	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	53.93	58.01
CDY24158	Canola	plasma membrane	56.24	57.88
CDY21797	Canola	plasma membrane	54.77	57.74
CDY23043	Canola	cytosol, mitochondrion	30.95	57.62
CDX68440	Canola	cytosol, mitochondrion	8.39	57.55
Bra018115.1-P	Field mustard	plasma membrane	55.61	57.24
AT3G47750.1	Thale cress	mitochondrion, plasma membrane	55.72	56.67
CDX77874	Canola	plasma membrane	49.21	56.57
VIT_07s0095g00600.t01	Wine grape	extracellular	4.09	56.52
CDY62599	Canola	plasma membrane	51.31	56.27
CDX77421	Canola	plasma membrane	55.09	56.15
AT5G61700.1	Thale cress	plasma membrane	53.83	55.94
AT3G47740.1	Thale cress	plasma membrane	54.56	55.79
CDY02114	Canola	plasma membrane	51.84	55.69
AT5G61740.1	Thale cress	plasma membrane	53.1	55.67
AT3G47760.3	Thale cress	plasma membrane	54.67	55.66
GSMUA_Achr7P23890_001	Banana	plasma membrane	68.31	55.64
CDY39546	Canola	plasma membrane	54.56	55.62
TraesCS1A01G343200.1	Wheat	mitochondrion	54.88	55.58
Solyc06g070950.1.1	Tomato	plasma membrane	51.94	55.56
Bra015049.1-P	Field mustard	plasma membrane	52.05	55.54
CDY23039	Canola	plasma membrane	51.42	55.18
AT3G47770.2	Thale cress	endoplasmic reticulum, golgi, plasma membrane, plastid	53.2	54.75
PGSC0003DMT400083071	Potato	plasma membrane	53.2	54.22
Bra012931.1-P	Field mustard	cytosol, peroxisome, plasma membrane	33.58	54.05
CDY36931	Canola	plastid	52.57	53.81
CDY24157	Canola	plastid	53.31	53.42
CDY23798	Canola	nucleus, peroxisome, plasma membrane	21.41	53.12
Bra033786.1-P	Field mustard	cytosol, mitochondrion, nucleus	16.37	52.35
GSMUA_Achr3P20510_001	Banana	plasma membrane	63.27	51.41
TraesCS6A01G183200.1	Wheat	plasma membrane	49.11	50.27
Bra012927.1-P	Field mustard	cytosol	32.32	50.08
CDX68438	Canola	endoplasmic reticulum, extracellular, plasma membrane	21.09	47.18
VIT_18s0041g02240.t01	Wine grape	plasma membrane	36.41	47.15
CDX68439	Canola	nucleus	7.03	42.41
Solyc06g070930.2.1	Tomato	plastid	10.81	37.59
TraesCS3A01G399500.1	Wheat	plastid	7.14	25.47
TraesCS1A01G342900.2	Wheat	plasma membrane	24.34	24.02
TraesCS4A01G414400.1	Wheat	cytosol	6.51	23.57
TraesCS7A01G427700.1	Wheat	cytosol	6.3	23.08
TraesCS5A01G367900.1	Wheat	golgi	7.24	18.11
TraesCS3A01G399400.1	Wheat	cytosol	4.72	17.79

Protein Annotations

MapMan:24.1.3.2.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCA	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF12698	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19229	PANTHER:PTHR19229:SF141	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1A01G343000	EnsemblPlants:TraesCS1A01G343000.1	TIGR:cd03263	SEG:seg

Description

No Description!

Coordinates

chr1A:+:531717134..531722196

Molecular Weight (calculated)

105653.0 Da

IEP (calculated)

8.544

GRAVY (calculated)

0.058

Length

953 amino acids

Sequence
(BLAST)

001: MDSSTGSSRG PAGFSTQANA LLRKNLCFQK RNLKTNVCIT LFPILLCVLL VLLQGAIDRE IDKPKYRCGC ACVDAAADGT CRRTECGVQY STLDQVASCP
101: IPTPPRWPAL VQLPTPESRA ISTASQPFDG LPGQTCRDAG SCPAAFLVTG ANRSLAESLS GQLFPALSSP LNFTDYLGAL SKIVPGSDTT PEFRQLLEPA
201: FTPGNTLYIV QPQCRSNLSQ TVLVNAGIIP LQLNVECIQG LMLWRESESI VNDELFRGYR QQRESGREKA NEFAAGYNFL STNKDSLDIS IWFNSTYSNN
301: TAFTEIALLR VPRLVNMASN AYIKFLRGSG VEMLLEYVKD MPKVGTKLKF DLSSLLGALF FTWIVELLFP VVLTYLVYEK QQKLKIMMKM HGLKDGPYWM
401: ITYTYFFALS AVYMLLFIIF GSVIGLRFFT ANNYSIQIVF YFIYINLQIA LAFFAASFFS SVKIATVVGY IYVFGSGLLG AFLLRFFVED NSFPKGWIVV
501: MEIIPGFSLY RGLYEFGQYA FSGTAMGTSG MEWTNLSDPV NGMRTVLIIM VIEWAILLPL AFYLDQVSSL GGGLRKRLLI SLKCFKKRAA SFRRYSFGRQ
601: GSKVVVEMEN PDTTQEREVV EQLLLEPSAN HAIISDNLTK VYHGKDGNPD KLAVRGLSLA LPKGQCFGML GPNGAGKTSF ISMMIGLIPP TSGTAYVHGM
701: DIRTDMNEIY TNMGVCPQHD LLWETLTGRE HLLFYGRLKN LKGAELLKAT DDSLKSVNLF RGGVGDKQVG KYSGGMKRRL SVAISLIGDP KVVFMDEPST
801: GLDPASRNNL WSVVKEAKKN RAIILTTHSM EEAEVLCDRL GIFVDGGFQC IGNPKELKAR YGGTYVFTMT TSSEHEQEVE QLVRRLSPNA NRIYHISGTQ
901: KFELPKQEVK IADVFNEVES AKGRFSIHAW GLADTTLEDV FIKVAKGAQA FNV

Best Arabidopsis Sequence Match ( AT3G47780.1 )
(BLAST)

001: MADPGPASFS TRANALLRKN LTYQKRNLWS NIRLIMIPFY LCILLVIIQI LFDTQVNNSA DNRCGCECIE RNRAGKCQRE LCGLEHSKPD QAFFCSIPRP
101: PLWPPLLQIP RPESRDVRGL RDDSCRRTGS CPVTILFTGN NRSLGTTVSE NLFTSSVSAN ASEILRTLAN NVLGTTVEAD FTNYLDPGIA SNLSIYNIQP
201: RCILNATFPF SFEQPPLKFE KELRCVQGSN LWTNTSKEVN DKIFKGYKKG NPEGKINEIA AAYDLLNTDR NNFNVHIWYN STYKDDAGNR LIKLIRVPRS
301: VNLVSNAYLQ FLQGPGTRML FEYVKEMPKP ETSLRLDIAS LIGPLFFTWV ILLLFPVILS SLVYEKQQHL RIIMKMHGLG DGPYWMISYA YFLTISVLYV
401: ICLMIFGSAI GLKFFRLNSY SIQFVFYFLY LNLQIALAFL VSSVFSKVKT STVASYIYVF GSGLLGLFLL NFLIEDSSFP RGWIIVMELY PGFSLYRGLY
501: ELAQFAFRGN LRGEDGMKWK DFGDSAMDDV FYIIVVEWFL ALIAAYYIDK ISSSGRNPLF FLQNPFKKSP SLRRPSLQRQ GSKVSVDMEK PDVTHESKKV
601: ERLMLESSTS HAIVCDNLKK VYPGRDGNPP KLAVRGLSLA VPSGECFGML GPNGAGKTSF INMMTGLLKP TSGTALVQGL DICNDMDRVY TSMGVCPQHD
701: LLWETLTGRE HLLFYGRLKN LKGADLNQAV EESLKSVNLF HGGVADKPAG KYSGGMKRRL SVAISLIGNP KVVYMDEPST GLDPASRKNL WTVIKRAKQN
801: TAIILTTHSM EEAEFLCDRL GIFVDGGLQC IGNPKELKGR YGGSYVFTMT TSSEHEQNVE KLIKDVSPNA KKIYHIAGTQ KFELPKEEVR ISEVFQAVEK
901: AKSNFTVFAW GLADTTLEDV FIKVVRNGQA FNVFS

Arabidopsis Description

ABCA7ABC transporter A family member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.