Factsheet for TraesCS4A01G414400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G315100.1	Wheat	cytosol	94.68	94.68
TraesCS7A01G427700.1	Wheat	cytosol	81.75	82.69
HORVU4Hr1G079940.5	Barley	cytosol	91.25	76.92
Solyc06g068600.2.1	Tomato	cytosol	47.53	67.57
CDY01873	Canola	cytosol	66.92	66.67
Bra004271.1-P	Field mustard	cytosol	66.16	65.91
CDX96058	Canola	cytosol	66.16	65.91
AT1G67940.1	Thale cress	cytosol	65.4	65.4
VIT_11s0052g00540.t01	Wine grape	cytosol	64.26	63.06
Os06t0695800-01	Rice	unclear	80.23	60.98
KRH41857	Soybean	plasma membrane	60.08	60.77
Solyc03g117810.2.1	Tomato	cytosol	59.7	59.7
PGSC0003DMT400036875	Potato	cytosol	59.32	59.32
GSMUA_Achr7P19550_001	Banana	endoplasmic reticulum, extracellular, vacuole	68.06	57.74
PGSC0003DMT400074438	Potato	extracellular	61.22	57.5
Os10t0434900-00	Rice	cytosol, mitochondrion	28.52	55.97
TraesCS3A01G399500.1	Wheat	plastid	27.38	26.97
TraesCS5A01G367900.1	Wheat	golgi	26.62	18.37
TraesCS3A01G399400.1	Wheat	cytosol	16.35	17.0
TraesCS7A01G367700.1	Wheat	plasma membrane	20.15	9.33
TraesCS6A01G183200.1	Wheat	plasma membrane	23.95	6.77
TraesCS1A01G343200.1	Wheat	mitochondrion	23.57	6.59
TraesCS5A01G193200.1	Wheat	plasma membrane	23.57	6.55
TraesCS1A01G343000.1	Wheat	plasma membrane	23.57	6.51
TraesCS1A01G342900.2	Wheat	plasma membrane	21.29	5.8
TraesCS5A01G534100.3	Wheat	cytosol	22.05	5.74

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005315	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016787	GO:GO:0016887
GO:GO:0035435	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005	ScanProsite:PS00211	PFscan:PS50893
PANTHER:PTHR43423	PANTHER:PTHR43423:SF1	InterPro:Phosp_transpt1	SMART:SM00382	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS4A01G414400
EnsemblPlants:TraesCS4A01G414400.1	TIGR:cd03260	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4A:-:684899281..684900343

Molecular Weight (calculated)

28005.0 Da

IEP (calculated)

5.152

GRAVY (calculated)

-0.003

Length

263 amino acids

Sequence
(BLAST)

001: MGSSPAPDDA MRQHLLDVDV DGGDGPKIRV RGLTLRPPGP DGEPTVPGSD LDVPRGVVMG VIGPSGSGKS TLLRALNRLW EPAPGAVTLD GADIRGLDVL
101: ALRRRVGMLF QLPAMFHGTV ADNVRYGPRL RGETLTDAQV EELLGLSDLD PALASRPASE LSVGQAQRVA LARTLANDPE VLLLDEPTSA LDPISTQNIE
201: EAIVRLKKAR GITTVIVSHS VRQIQRIADL VCLVVDGVVV EVLPPSDLSQ AKHLMARRFL ELS

Best Arabidopsis Sequence Match ( AT1G67940.1 )
(BLAST)

001: MPSLWSNESD GSLREHLVDV VVSGSEPKIR VHDLTRVADD GSRILKGVTI DIPKGMIVGV IGPSGSGKST FLRSLNRLWE PPESTVFLDG EDITNVDVIA
101: LRRRVGMLFQ LPVLFQGTVA DNVRYGPNLR GEKLSDEEVY KLLSLADLDA SFAKKTGAEL SVGQAQRVAL ARTLANEPEV LLLDEPTSAL DPISTENIED
201: VIVKLKKQRG ITTVIVSHSI KQIQKVADIV CLVVDGEIVE VLKPSELSHA THPMAQRFLQ LSS

Arabidopsis Description

ABCI17Sensitive to aluminum rhizotoxicity 1 [Source:UniProtKB/TrEMBL;Acc:D6RVY5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.