Factsheet for PGSC0003DMT400036875

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g117810.2.1	Tomato	cytosol	98.1	98.1
PGSC0003DMT400074438	Potato	extracellular	79.85	75.0
Zm00001d014611_P001	Maize	cytosol, mitochondrion, plasma membrane	50.19	70.21
VIT_11s0052g00540.t01	Wine grape	cytosol	71.48	70.15
Bra004271.1-P	Field mustard	cytosol	69.58	69.32
CDX96058	Canola	cytosol	69.58	69.32
KRH41857	Soybean	plasma membrane	68.06	68.85
CDY01873	Canola	cytosol	68.82	68.56
AT1G67940.1	Thale cress	cytosol	68.44	68.44
TraesCS7A01G427700.1	Wheat	cytosol	64.64	65.38
TraesCS7B01G327900.1	Wheat	cytosol, golgi, mitochondrion	63.88	64.62
TraesCS7D01G420100.1	Wheat	cytosol, golgi, mitochondrion	63.88	63.88
EER90300	Sorghum	cytosol, endoplasmic reticulum, mitochondrion	64.64	63.43
TraesCS4B01G315100.1	Wheat	cytosol	60.46	60.46
TraesCS4A01G414400.1	Wheat	cytosol	59.32	59.32
TraesCS4B01G336400.1	Wheat	cytosol, plastid	63.5	58.8
HORVU7Hr1G098490.2	Barley	plastid	63.12	56.85
TraesCS4D01G332100.1	Wheat	cytosol	61.22	56.29
GSMUA_Achr7P19550_001	Banana	endoplasmic reticulum, extracellular, vacuole	66.16	56.13
HORVU4Hr1G079940.5	Barley	cytosol	60.08	50.64
Os06t0695800-01	Rice	unclear	66.16	50.29
Os10t0434900-00	Rice	cytosol, mitochondrion	24.33	47.76
PGSC0003DMT400083070	Potato	cytosol	3.42	7.26
PGSC0003DMT400083071	Potato	plasma membrane	22.05	6.2
PGSC0003DMT400046727	Potato	plasma membrane	18.63	5.25
PGSC0003DMT400083147	Potato	plasma membrane	18.25	5.06

Protein Annotations

EntrezGene:102594394	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005315	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016787
GO:GO:0016887	GO:GO:0035435	InterPro:IPR003439	UniProt:M1B4E7	InterPro:P-loop_NTPase	PFAM:PF00005
EnsemblPlantsGene:PGSC0003DMG400014219	PGSC:PGSC0003DMG400014219	EnsemblPlants:PGSC0003DMT400036875	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR43423
PANTHER:PTHR43423:SF1	InterPro:Phosp_transpt1	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI0002950136	RefSeq:XP_006341433.1
SEG:seg	:	:	:	:	:

Description

Phosphate abc transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400014219]

Coordinates

chr3:-:57427570..57431577

Molecular Weight (calculated)

28970.2 Da

IEP (calculated)

5.433

GRAVY (calculated)

-0.078

Length

263 amino acids

Sequence
(BLAST)

001: MEILPGAREH LLGSNGNENG FEENPEIKIQ VRGLTKVSEK GVSILNNVNV DIPKGVIMGV IGPSGSGKST FLRSLNRLWE PSSNSVFLDG HDICDLDVLA
101: LRRKIGMLFQ IPVLFEGTVA DNVRYGPQLK GKKLSDNEVY KLLTLADLDS SFFNKSGGEL SVGQAQRVAL ARTLANEPEV LLLDEPTSAL DPISTQNIED
201: VLVKLKREQN MTIVMVSHSI KQIKRIAEIV CLLVNGEIVE ILKPDQLFES KHPMAQRFLE LSS

Best Arabidopsis Sequence Match ( AT1G67940.1 )
(BLAST)

001: MPSLWSNESD GSLREHLVDV VVSGSEPKIR VHDLTRVADD GSRILKGVTI DIPKGMIVGV IGPSGSGKST FLRSLNRLWE PPESTVFLDG EDITNVDVIA
101: LRRRVGMLFQ LPVLFQGTVA DNVRYGPNLR GEKLSDEEVY KLLSLADLDA SFAKKTGAEL SVGQAQRVAL ARTLANEPEV LLLDEPTSAL DPISTENIED
201: VIVKLKKQRG ITTVIVSHSI KQIQKVADIV CLVVDGEIVE VLKPSELSHA THPMAQRFLQ LSS

Arabidopsis Description

ABCI17Sensitive to aluminum rhizotoxicity 1 [Source:UniProtKB/TrEMBL;Acc:D6RVY5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.