Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 3
- golgi 2
- plasma membrane 4
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g070940.2.1 | Tomato | plasma membrane | 95.68 | 96.18 |
| PGSC0003DMT400046727 | Potato | plasma membrane | 63.61 | 64.56 |
| PGSC0003DMT400083070 | Potato | cytosol | 3.59 | 27.42 |
| PGSC0003DMT400083071 | Potato | plasma membrane | 22.78 | 23.1 |
| PGSC0003DMT400074438 | Potato | extracellular | 5.59 | 18.93 |
| PGSC0003DMT400036875 | Potato | cytosol | 5.06 | 18.25 |
Protein Annotations
| EntrezGene:102588270 | MapMan:24.1.3.2.1 | Gene3D:3.40.50.300 | MapMan:5.8.5 | InterPro:AAA+_ATPase | InterPro:ABCA |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 |
| InterPro:IPR003439 | UniProt:M1D6K7 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF12698 | EnsemblPlantsGene:PGSC0003DMG400033077 |
| PGSC:PGSC0003DMG400033077 | EnsemblPlants:PGSC0003DMT400083147 | ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR19229 | PANTHER:PTHR19229:SF193 |
| SMART:SM00382 | SUPFAM:SSF52540 | TMHMM:TMhelix | UniParc:UPI00029680F0 | RefSeq:XP_006354789.1 | SEG:seg |
Description
ABC transporter A family member 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400033077]
Coordinates
chr6:+:51766423..51771503
Molecular Weight (calculated)
105495.0 Da
IEP (calculated)
8.488
GRAVY (calculated)
0.045
Length
948 amino acids
Sequence
(BLAST)
(BLAST)
001: MELQGGIPLL MQQYKALFKK NVLLALRNKP ATFLQLFSSF FFIFLLFCIK LSDESRNADN SYAKELRDPK PLMAPPIPPC EDKFYIKTPC YDFIWSGKHS
101: KTIGDVVKGI MANNPGRPIP ANKVLAFNTA KDVDKWLFDN PVRCPAAVHF TIVKGNKISY GIQTNSTDVV KRGVTEDPTF KFQIPLQIAA EREIARNLIG
201: DPKFPWDVSF KEFPHPPGEI FNEVTLSAMV FFMAVAIFGF VFQVSALITE KELKLRQAMT MMGLFDTAYW LSWITWEGLL IFFSSALTVI FGMMFQFDFF
301: LRNNVLVVFL LFFLFQLTMV VFGYWLSTFL TKAASATNVA FVIFIVGFIT MIGSQLANYP YSAAYSNGHR VYWSLFPPNL LTIGLQLLTK ATESPKDPGI
401: SWSTRAKCLP KEPDCVTTMH DVYILLVKTF FFWLVLAIYF DNIIPNISGV RKSKLYFLYP GYWTGNGGSS VKEGGNCSIC SGSLPRLDPI TPDDEDVLTE
501: ENTVKKQAME GDNSNNAVQI RGLIKTYPGK KTGGCCCCCR KKSPPFHSVK GLWLNVEKDQ LLCMLGPNGA GKTTTISCLT GINPVTAGDA LVYNQSIRSS
601: MGMTNIRRMM GVCPQFDILW DALSGQENLQ IFANIKGLPP ASVDTVVAQL LSQSKITKVS AKMRSCSYSG GMKRRLSVAI ALIGDPKLVI LDEPTTGMDP
701: ITRRHVWDII EKAKKGRAII LTTHSMEEAD VLSDRISIMA KGRLRCIGTS IRLKAKFGTG FIANVGLVSE STSPEAVKHF FKSHLDVVPK DENKCFLTYV
801: IPHEREKMLT EFFAELQARQ SEFGVKDIQL GLTTLEEVFM NIAKQADVET AIAEGRFKTL TLNSGNSVEV PVGAQFIGLP GTKSPQNPGG IMVEVYWEPD
901: ETGSPCIYGL SEEMPIPPHI QLRDPPTNNS PTNQGIVIDP SQLKMHLS
101: KTIGDVVKGI MANNPGRPIP ANKVLAFNTA KDVDKWLFDN PVRCPAAVHF TIVKGNKISY GIQTNSTDVV KRGVTEDPTF KFQIPLQIAA EREIARNLIG
201: DPKFPWDVSF KEFPHPPGEI FNEVTLSAMV FFMAVAIFGF VFQVSALITE KELKLRQAMT MMGLFDTAYW LSWITWEGLL IFFSSALTVI FGMMFQFDFF
301: LRNNVLVVFL LFFLFQLTMV VFGYWLSTFL TKAASATNVA FVIFIVGFIT MIGSQLANYP YSAAYSNGHR VYWSLFPPNL LTIGLQLLTK ATESPKDPGI
401: SWSTRAKCLP KEPDCVTTMH DVYILLVKTF FFWLVLAIYF DNIIPNISGV RKSKLYFLYP GYWTGNGGSS VKEGGNCSIC SGSLPRLDPI TPDDEDVLTE
501: ENTVKKQAME GDNSNNAVQI RGLIKTYPGK KTGGCCCCCR KKSPPFHSVK GLWLNVEKDQ LLCMLGPNGA GKTTTISCLT GINPVTAGDA LVYNQSIRSS
601: MGMTNIRRMM GVCPQFDILW DALSGQENLQ IFANIKGLPP ASVDTVVAQL LSQSKITKVS AKMRSCSYSG GMKRRLSVAI ALIGDPKLVI LDEPTTGMDP
701: ITRRHVWDII EKAKKGRAII LTTHSMEEAD VLSDRISIMA KGRLRCIGTS IRLKAKFGTG FIANVGLVSE STSPEAVKHF FKSHLDVVPK DENKCFLTYV
801: IPHEREKMLT EFFAELQARQ SEFGVKDIQL GLTTLEEVFM NIAKQADVET AIAEGRFKTL TLNSGNSVEV PVGAQFIGLP GTKSPQNPGG IMVEVYWEPD
901: ETGSPCIYGL SEEMPIPPHI QLRDPPTNNS PTNQGIVIDP SQLKMHLS
001: MTLQRGLPLL LQQYTALFKK NLLLSWRSKR ATFLQLFASF FFILLIFCIQ AAMEKSFASS TALKTVTDPT ALISPPIPPC EDKFFVNLPC YDFVWSGNRS
101: SKVTQIVNAI MKNNPGRSIP IEKVRSFVDP EAVDTWLMAN PLLVPGALHF IERNATVISY GIQTNSTPEM NRGRFEDPTF KFQIPLQIAA EREIARSLIG
201: DPNFNWVVGF KEFPHPTIEA IVALDTIGPT FFLAVAMFGF VLQISSLITE KELKLRQAMT MMGVFDTAYW LSWLTWEGIL TAISALLTVL FGMMFQFDFF
301: LKNSFPVVFL LFMLFQFNLI GLAFMLSAFI SKSTSATTVG FFVFLVGFVT QLATSSGFPY AKKYSRMIRA LWSLFPPNTF SQGLKLLADA TSTPQDPGIS
401: WSKRAECGPN DDTGCVLTIN DIYLWLLGTF FLWFVLALYF DNITPNASGV RKSIFYFLKP GYWTGKGGNR VEEGGICSCI GSVPPVDHIT PDDEDVLEEE
501: TLVKQHSMEG LVDPNVAVQI RGLAKTYPGT TKFGCCKCKK TSPFHALKGL WMNIAKDQLF CLLGPNGAGK TTTINCLTGL FPVTGGDALI YGNSIRSSVG
601: MSNIRKMIGV CPQFDILWDA LSGEEHLKLF ASIKGLPPSS INSMVEKSLA EVKLTEAGKI RAGSYSGGMK RRLSVAVSLI GDPKLVFLDE PTTGMDPITR
701: RHVWDIIQET KKGRAIILTT HSMEEADILS DRIGIMAKGR LRCIGTSIRL KSRFGTGFIA NISFVESNNH NGEAGSDSRE PVKKFFKDHL KVKPIEENKA
801: FMTFVIPHDK ENLLTSFFAE LQDREEEFGI SDIQLGLATL EEVFLNIARK AELESAAVDG TMVTLDLTSG SSVEIPVGAR FIGIPGTETA ENPRGVMVEV
901: YWQQDESGSL CISGHSTEMP IPENIPVTDP VAPGHGGVNL LGRRGRRQVQ GIVIDPEFAT FTRSGSTSSR RFSRSGSSRR FSS
101: SKVTQIVNAI MKNNPGRSIP IEKVRSFVDP EAVDTWLMAN PLLVPGALHF IERNATVISY GIQTNSTPEM NRGRFEDPTF KFQIPLQIAA EREIARSLIG
201: DPNFNWVVGF KEFPHPTIEA IVALDTIGPT FFLAVAMFGF VLQISSLITE KELKLRQAMT MMGVFDTAYW LSWLTWEGIL TAISALLTVL FGMMFQFDFF
301: LKNSFPVVFL LFMLFQFNLI GLAFMLSAFI SKSTSATTVG FFVFLVGFVT QLATSSGFPY AKKYSRMIRA LWSLFPPNTF SQGLKLLADA TSTPQDPGIS
401: WSKRAECGPN DDTGCVLTIN DIYLWLLGTF FLWFVLALYF DNITPNASGV RKSIFYFLKP GYWTGKGGNR VEEGGICSCI GSVPPVDHIT PDDEDVLEEE
501: TLVKQHSMEG LVDPNVAVQI RGLAKTYPGT TKFGCCKCKK TSPFHALKGL WMNIAKDQLF CLLGPNGAGK TTTINCLTGL FPVTGGDALI YGNSIRSSVG
601: MSNIRKMIGV CPQFDILWDA LSGEEHLKLF ASIKGLPPSS INSMVEKSLA EVKLTEAGKI RAGSYSGGMK RRLSVAVSLI GDPKLVFLDE PTTGMDPITR
701: RHVWDIIQET KKGRAIILTT HSMEEADILS DRIGIMAKGR LRCIGTSIRL KSRFGTGFIA NISFVESNNH NGEAGSDSRE PVKKFFKDHL KVKPIEENKA
801: FMTFVIPHDK ENLLTSFFAE LQDREEEFGI SDIQLGLATL EEVFLNIARK AELESAAVDG TMVTLDLTSG SSVEIPVGAR FIGIPGTETA ENPRGVMVEV
901: YWQQDESGSL CISGHSTEMP IPENIPVTDP VAPGHGGVNL LGRRGRRQVQ GIVIDPEFAT FTRSGSTSSR RFSRSGSSRR FSS
Arabidopsis Description
ABCA2ATH1 [Source:UniProtKB/TrEMBL;Acc:A0A178V6R6]
SUBAcon: [mitochondrion,plasma membrane]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.